Nematostella vectensis (starlet sea anemone): 5511712
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Entry
5511712 CDS
T01037
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes flexible hinge domain-containing protein 1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nve03036
]
5511712
03400 DNA repair and recombination proteins [BR:
nve03400
]
5511712
Chromosome and associated proteins [BR:
nve03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
5511712
DNA repair and recombination proteins [BR:
nve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
5511712
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCHD1_S5
HATPase_c_3
Motif
Other DBs
NCBI-GeneID:
5511712
NCBI-ProteinID:
XP_032236995
LinkDB
All DBs
Position
Unknown
AA seq
1968 aa
AA seq
DB search
MASVDVVLSCGTQDKKLKIPKACTFKSFRKKVQDEFPHLPKTFSIADSDFTEVTSDSFRE
ILDGRVETWFLVRANRTEEFTLKKPRYELLRYDVHPNALTQSGNYHFVSSYQAFCEFIDN
SIQATNNNHERDLERNIKLQIHSKDRVAVVFDNGQGMFYEGLKAFATYFLSQADRGLEPD
QVDQTPAFLDGMISKFGVGATQAGFYLGDRIKVVTKRVECPYVTEITISKEKLHQRADEG
KPVFEDYRCIRNTGDTSTLELDEEQRCLKELVESEKKFSQFTYVVITGIKDSHMEYMKAD
GGRHLTRSLAHVYHFYLWGETGCSGNMRLPSSSRLMVDVGDTCFRKVDIEVLFGDGRNTR
SVALRDITDDLESRYQNNAKEWFPFKLTLKVPGLEMPQIVQGVVMYYPHESGQETNPREL
DEDGESEPIFECFWQGRLAPLSYVHRLEFCSPPMQRTKKQRDVLPDMCYRRLKGILFFNR
HTPISNNKLKILLDERKDLSSALEDATADRRLPKEFNAWLESCHKHLDKEVVFEGLVPGQ
PGSDVDGETYYKTIRLTTCDAEGNSREQRYTQGDIVKLNTKPLIYGRVLYFTQAARKHDY
DKVVVIRQPEEVYHDQQEEKPISRIVDIPDSNTLKKVFSSEKQMLPKSVRVCXDTQGNDV
LSKMTWIAGENHRDYAGTWVKVFSGERPPRPIVAVHNKKISIKQIVEGPEIHAPIQNDVA
IEGERFGFKPFWLGKAGHYVLRYVAVMNEQELCSAKVDIEVQANVATFVRLDEPGERETP
VIALGEPELMFKLHFRDEWDNPTARFVSGDNVKLEISTSNLSIKGTKDCYKPNRNGDLEV
KGLILEPKKGTKGPVNREHAIRVNAIDVGDVIFQVRLKEGSPQSLKLPEFDTLEVKNLEE
FPEFTVQLLDSWGQNCGLVEKKHRLRADSEAFAPGLHICGVDQGFGTFQPIKILVSSGRA
PCSVKVKISLVTVETVRRKQVIGEVLKELSQFTVKVLPSGLPHRIKILHGDEAKKGMRNG
TANGRNGLRDHSGDTGRECLELSAPAGSMLTGLRLCAFDESGRQLSEEELRETGPQVSTS
WSGEVPVKNLPDLPSCPVAQLVQSTFVGNVTCLCRDVTCQSQIRIHPVEGEACKWSIHAD
TNTVEIECGAKKELATSSLRVRTLDKYNNPTECPRDLTPIVSLHSSRQSESSSVEFSGEL
SYKSSTKEFIFSNDAVLTGKPGYVTMTVCDKDSTLTKDSIRINLKPGPPHHIELWSQAFE
SEEQQQEQALRVFSGCTVQSQIHAYVCDQAGNKTPLKTSLSLSWQPGSAGQTVTKKTRDS
GEAIFVSNALRCSGKPDHEVKIKIHSSDHRQLQAAFVRVNVEKSNRVTAVLVSVEDDGCI
AGNNYPTLKITCQTEDNVPVDARDHLSLEVRKPDGNVINGSTVYRKPTQNNEGVVSFLPH
GGRYVEQAGQWSVCCLFTEYRSRLEAMLPSSEHLVRSAEVKFKVFPGPAKELSVSLPSEE
SALLSASSTADLRGRTILPRPGRGETVELLILDTFGNTADASTMVDVTIAWPSGPTPPDV
LLPALETSPLRIRIDNGKARLPRLSLKPRVGNYIGDYHLVFTAQGLSSCVLKFSFSTDEH
IQRIQTEMAPLKQTLRECETTLREARDKCNARRGAVRSKLEPVRALFRGEPSTQDVSKQL
QSVMGQLAQMAVAQNSVRLPSIPHGHPPTRIRQYIKGIVAELAYVSDPDLSRLLSWYLQH
KMGVALTSTIQQQRKVYDANCAAYCEDTLLPFNKKNFDGSDGRVLPLEFPQPPANFSSSI
QFAINLLEFSSSNGYLRSTLFWSLLSKTMVIDDLRSGQVYREHLVRMRFPCPTILTRDGH
VIASDGLMDPKKRCPQRLDNLKFTFGALPPAEQPHFRELNETQRYLQDLSEALQEFDNDV
EVVKQAEDRQKRTRASLTPQITALEKQLSKLRSPPTNTNEPPEKRKRK
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgttgacgttgtcctgtcatgtgggactcaggacaaaaaactgaaaattccc
aaagcatgtacattcaagagcttcagaaagaaagtccaagatgagttcccacatctgcct
aagacatttagcatagctgatagcgactttactgaagttacatctgacagcttcagagag
attcttgatggccgggtagaaacgtggtttttggtccgtgcaaacaggacagaagagttc
actttgaagaagccacgttacgaactgttacgatatgacgtccatcctaatgccctgacg
caaagtggcaattaccactttgtctccagttaccaggccttctgtgagttcatcgacaac
agcatacaggccaccaacaacaaccacgagagagaccttgagaggaatataaagttgcag
atccattcgaaagatagggttgccgtagttttcgacaatggccaggggatgttttacgag
ggcctcaaggccttcgctacgtatttcctgtcgcaggccgacaggggcctagagcctgac
caggtggaccagacccctgcattcctagacggaatgatctccaagtttggagtgggagcc
acgcaggcagggttctacctcggtgaccgtatcaaggtggtaactaaaagggtagagtgt
ccatatgtaacggagatcacgatatcaaaggagaagctccaccagcgagcagatgagggt
aaacctgtgttcgaggactacagatgcatccgaaacacgggcgatacgtctaccctagag
ttggacgaggagcagagatgccttaaggagctggttgagtcagagaagaagttcagtcag
ttcacttacgtggtgatcaccggtattaaagactctcacatggaatatatgaaagctgat
ggtggccgacaccttactcgcagcttggcgcatgtgtatcacttctacttgtggggcgag
actggctgtagtggtaacatgaggttgccttcatcctccaggctaatggtggacgtgggt
gacacatgtttcaggaaggtcgacatcgaagtgctctttggagatgggcgcaacacacgc
tccgttgcattgcgtgacatcacagatgatttagagtcacgctaccaaaataacgcaaag
gagtggtttcctttcaagctgacgcttaaagttcctggtcttgaaatgccgcaaatagtg
cagggtgtggtgatgtactacccacacgagtcgggccaggagacgaaccctcgagagctg
gacgaggacggagagtcggagcccatattcgagtgtttctggcagggacgactggcgcct
ttatcttacgtgcataggctagaattctgctcaccgcccatgcaacggaccaagaagcaa
cgtgatgtcttaccagacatgtgctatcgccgcctaaagggcatcttattcttcaaccgt
cacacgcccatttccaacaacaagctgaagatattacttgatgagcgcaaggacctatcc
agcgcgctagaagacgcgacggctgatcgccgcctcccaaaagagttcaacgcctggcta
gaaagctgccataagcacttagataaagaggtggtttttgagggccttgtgccagggcag
ccaggaagtgacgtcgatggcgaaacctactacaaaacgatccgtttgaccacatgtgac
gctgaaggaaacagcagagagcagcgctacactcaaggagacatagtcaagctgaatacc
aagcctctcatctatgggcgcgtcctctactttacacaggcagcccgcaaacatgactat
gacaaggtggtggttatcaggcagccggaggaggtttaccatgaccagcaagaggaaaaa
cccatttctcgcattgttgacattccagattcaaacacactaaaaaaggtcttcagctcc
gagaaacagatgcttcctaaatctgtgcgtgtgtgttaggatacacaaggtaacgatgtg
ctgagtaagatgacatggattgccggagagaatcatcgggattacgctggcacatgggtt
aaggtgttcagtggggagcggccaccgcggcccattgtggctgtgcacaacaaaaagatc
agcataaaacagatcgtggagggaccagagatccacgcacctattcaaaatgacgtggca
atcgagggggaaaggtttggtttcaagccgttctggcttggaaaggctgggcactacgtg
ttacgttacgtcgcggtgatgaatgaacaagagctgtgctctgctaaggtcgatatcgag
gtccaagcgaacgtcgcgacgtttgtgcggttggacgaaccaggggagagagagacgccg
gtgatcgcgctaggggagcctgaacttatgtttaaattgcactttcgcgatgagtgggat
aaccccacggctcgcttcgtgtcgggtgacaatgtaaagctagagatttcaacgagtaac
ctatctatcaagggaacgaaggactgttacaagcccaatcgtaatggtgacctggaggtg
aaaggcttgatcctggagcccaagaaaggcaccaagggacccgtcaaccgcgagcatgca
atacgagtcaatgcgattgatgtgggtgacgtcatcttccaagttcgccttaaggagggg
tctccgcagtcgctgaaactacccgaattcgacacgctggaagtgaaaaatttggaagaa
ttcccggaattcactgtacagctgctggacagctggggacaaaattgcgggctcgtggag
aaaaaacacaggcttcgcgcagactcagaagcgtttgcgccaggacttcacatctgcggg
gtggaccagggctttgggacatttcagccaatcaaaattctggtctccagtggtagggcg
ccttgctcagtgaaagttaagatctcattggttaccgtggagacagtgcggaggaaacag
gtgattggtgaggttctcaaagagctgagccagttcactgtcaaagtacttcccagcggt
cttccgcatcgaatcaagattttacatggagacgaggccaaaaagggtatgcgtaacggc
acagccaatggtagaaatgggttacgggatcactcgggggatacgggacgtgagtgcctt
gagttatctgcgcccgctggctccatgctgacaggactgcggttatgtgcgtttgacgag
agtggacggcagttaagtgaagaggaactgagggagactgggccccaggtttctacaagc
tggagtggagaggtcccggtgaaaaatcttccggatcttcccagctgccccgtagcccaa
ctcgtgcaaagcacatttgtgggtaacgtcacgtgtttatgccgtgacgtcacgtgtcaa
tcccaaataaggattcatcctgttgaaggtgaagcttgcaaatggtcaattcatgcggac
accaacacggtagagattgagtgcggtgccaaaaaggagctggccaccagtagtctgcgc
gtgcgcactctcgacaaatacaacaacccgacagagtgcccacgtgacctaacacctata
gtctccttgcacagctccaggcagagcgagtcttcatctgttgaattcagtggcgagttg
tcttataaatcgtccacaaaagagtttattttctctaacgatgcggtgctgactgggaaa
ccaggatatgttacaatgaccgtgtgcgacaaggacagtactctaaccaaggactccatc
agaatcaacttgaaaccaggtcctcctcatcatatagaactttggagccaagcatttgag
tcagaggaacagcaacaagagcaagcgctaagagtattctcggggtgtaccgtccagagt
caaatacatgcgtatgtatgcgaccaagccgggaacaagacgccacttaaaacctctcta
agtctgtcatggcagcccgggtccgccggacagacggtcaccaagaagacacgtgattct
ggggaggccatcttcgtgtctaatgcactccggtgttctggcaagccagaccacgaggtg
aagataaaaatccacagctctgatcatcgccaactgcaggccgcattcgtgcgggtcaat
gtagagaagagtaaccgggtaactgcagtattagtatcagtcgaggacgatggttgtatc
gcaggaaataactaccccacacttaagatcacatgccaaacggaggacaatgtcccagtg
gacgcgcgggaccatttatccctcgaagtacgcaagccagatgggaacgttataaacggg
tcaacagtgtaccggaagcccacgcagaacaatgaaggcgtggtcagcttccttccccat
ggggggaggtatgtggagcaggcggggcaatggagtgtctgttgcctgttcaccgagtat
cgaagccgcttggaggccatgctaccctcctcggagcatcttgttcgtagtgcagaggtc
aaatttaaagttttcccaggtccagccaaagaattatccgttagtctcccttctgaagag
agcgccttgctttccgcctccagtactgcggatcttcgcggtcgcaccattctaccgcgg
ccgggacgcggtgaaactgtagagctcctaatactcgacacatttggaaacactgccgat
gcttctaccatggttgacgtcacgatagcctggccatccggccccacccctcctgatgtg
cttttaccagccctcgagacctctcccctcaggatacgaatagacaatggcaaggcacgc
ctacctcgcctgagtctcaaaccacgtgtgggaaactacatcggtgactatcacctggta
ttcaccgcccaagggctttcgagctgtgtgctcaaattctcctttagcacggatgaacac
attcagcgcatccagacggagatggcgcctctcaagcagaccctgagggagtgcgagacg
acgctacgagaagcgagggacaaatgtaatgcgagaagaggagctgtacgcagcaaactc
gagccagtcagggcattattccgtggggagccaagcacacaggacgtcagcaagcaactt
cagtccgttatgggacagcttgcacagatggcggtagcacagaatagtgtcaggcttcct
agtataccacacgggcatcctccgacgaggatacggcagtacattaaaggtatcgtcgcc
gagctggcctatgtgtcggaccccgacttgtcccgtttattgtcctggtacctccagcat
aagatgggcgtggcactcaccagtaccattcagcagcagcgcaaggtgtacgacgccaat
tgcgccgcctactgcgaggacacgctactacctttcaacaagaagaacttcgacggatca
gatggccgggttcttccactagaattccctcagccgcctgcaaacttctccagctctatc
caattcgccatcaacttgctcgagttctcctcgtccaatggctaccttcgcagcacgctt
ttctggtctttgctgagcaagaccatggtcatcgatgacttgcgctcaggacaggtttac
cgggaacatttagtgcgcatgcgctttccatgcccaaccatactgacacgtgatgggcac
gtgattgcgtctgatggtctcatggatcctaagaaacgctgcccgcagagactggacaat
ctgaagttcacttttggggcgttacccccagcagagcagcctcatttcagggagctcaac
gagacgcagaggtacctacaagacctgagcgaggcgctgcaagaattcgacaacgacgta
gaggtggtcaaacaggcagaggatcgacagaaaaggacgcgtgcgtctctcactccgcaa
attactgcgctagaaaaacagctatccaagctacgctccccgcctactaatacaaacgaa
ccgccagaaaaacgcaaaagaaaatag
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