Nematostella vectensis (starlet sea anemone): 5518029
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Entry
5518029 CDS
T01037
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
5518029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5518029
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
5518029
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
5518029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
NOT1_connector
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
5518029
NCBI-ProteinID:
XP_032218430
LinkDB
All DBs
Position
Unknown
AA seq
2448 aa
AA seq
DB search
MSTGVDALSLSLKQISFAVTELSKKNFKSTVAEIHELIEKHGFEAECHFFRVLFSQIDFF
ADPKSPGKDYQQCQLLIQECQTLISKPNFASILCYAIENPEHKQKTLRPSPQLLANISRI
LKLNRVQEVIFGLGLLNSSNEELKSYAGLFVKQKLPDLLRSYIDGDTSGRQEAGLADVAI
EVLHRLLSHVIHGPHDQVGVGDDQVQAFLDTLRREFPKDRVPVVLAPLLYPDAHDVPASK
LVPDTSAPAKDVRADDLAGLMQEIGYVCCSSASECRETLQQFGIHDITAAAIARVIGMMV
KTAVGLGQHIPLQQNLNSSAAALDAKPDDDGEASWGVEIFIQVLKEQIPMMSWQQVLLEL
DYPGFKVTSVEGLKLLMAACQLGLQEAFPMELLYRNWSNTEGQLSWISMALHNPDVLCFA
DFPSHQVSVDILKALPEDESKEINTWKSLNLIETLLRLGEAGHYDAVKNLLRFPIKLCPD
ILLLALLQTNPTWQLLRNELILELIPVFLSNHPNAASVLHYVWHGQGQSSTVRQLTMKAM
ADWYVNGEQDQTRLSRILDVAQDLKALSMMLVGQPFSFVIDLAALASRREYLKLDKWMND
KLREHQEEFAQATITFLKRRCPTLVGISLDKELPKSIQLPAETVSTMLSCLQVYLATSQV
PPGMVEVIRQMIVNHGPLMKPRSASTSGGGPQLKRQGSLDSALPTPLAGQVDPLSSLGIS
PTLSSSPVTPSSQLPSFPPHPLLGSTMVSTSGLGAVGNIGSGLTQPIQKPSPTSQLGQLP
TSSTSSGMLSPVLGSSQLFQPLQQGGLGQSGSSTDSFRMLAGLGGHKPLGSSSLMQQQQQ
QVLMAQQQQQRNQAAEKIRQDVSQVWPGMDQSFGKDVEDEANSYFQRIYNHPPNPTISID
EVLEMLKKFKDSPNKKERDIFLCMLRNLFEEYRFFPQYPDKELHTTACLFGGIIEQGLVT
YMALGIALRYVLDALRKPYGSKMYMFGIAALDRFKTRLKDYPHYCQHLASIPHFKEFPQS
LIEYIDYGQQSREPPLVSRSLNQDSVSSRLINRSTGNSGTASPTFITSSANKHAQLPPSA
PASPKPSTPSSEGMPPAGRKEPSIANASNIDTLLGARDTTEIAQPPEQVQDKMHFIFNNI
SQSNLTQKAEEFKTLVQQEYIQWVSQYLVMKRASIEPNFHQLYIDFMEALDIPNFANEVL
KETFRNIKVLLQSEKVPANFSDRSLLKNLGHWLGLLTLARHKPILMKELDLKSLVIEAYF
KGQQEMLYVVPFVAKVLESSAKSKVFKPPNPWVMAIMGLLVELHQVQDLKLNLKFEVEVL
CNTLALDMKEIKATELLNDPERLKHIPHQLSSPERDKMAASTAMTSGTTSTSTATQPGLT
ATPPPPQYAYQEINVTSLAGLAPHIQVNQQIQLFQQHPHLKQCVRPAIERAVQELVHPVV
ERSIKICLTTAEMIVKKDFALDPEESRMRAAAHHMVRFMTAGMALITCREPLLISINNNL
RNSFLAALRTANQQQKEMIEQAASVVSEENTELACSFIQKTAVEKVLPEMDKRLATEFDV
RRHARSEGRRYCDPVILTYQAERMPEQIRLKVGGVNASQTAVYEEFARSIPGFKLPPAGE
TINTPSMPKQVYDHGLLTSSESSIPPVHEDFRPVDKPSVEGSAFMHAFPQSYNMPDEVVQ
LLGKCVEGIEQHLHAIMAPPSSPPVVAIHNLREAVIQARISRDNMAAVRLLQKATEGLLD
GITPMPSDQELALRFRDCHLIVLRGLQDHRAYGPVWASKHVTKFVCDCPPDLKFNVEAID
LLVRSHLLSAPEFDLHLVQCIENGHNLSALHFAIQLVKFMADEKHGNEGDMFNATFEALT
RIARNRQNPEGLSSLLETVHNGPSNALSHHDVPENKAPGGPTSLTPNVLTTFPGFEDPPG
LHDKVEYLLREWVRLCHQPGAGKDSEKAFSTFVALMHQQGILRSDDLITRFFRICTELCV
EVTYRALGDHPNSPTQARGKCFNTLDAYCRLIALLVRHSGDASNNVTKINLLNRVLSTVA
TVLFQDHELRHADFQQLPYHRIFIMLLLELNQPEPVLEAINFQVLQTFSTVLHALKPSRA
PGFAYAWLELISHRLFMSKLLLNTPQQKGWMLFQQLLIDLFKFLAPFLRNAELAKQTHLL
YKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPNCIQMRNLILSAFPRNMRLPDPFTPNLK
VDLLTDITHSPRILNNFVASIQPASFKKDLDSYLKTRAPVTFLTELRSHLQVSTEPGTRY
NVPLMNSLVLYVGTQAITYIHSKSATPSMSTITHSSHMDIFQNLAVDLDTEGRYLFLNAI
ANQLRYPNSHTHYFSCVLLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELI
KNHQYKFWTHEFVHCAPEIEKLFESVARSCMQQKQVATRESTSEAVRE
NT seq
7347 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccggtgtagacgcgttgtctctgtctttgaagcagatctcatttgctgttact
gaactcagcaaaaagaacttcaagtccaccgtggcggagatccacgagctaattgagaag
catgggtttgaagctgaatgccatttcttccgggttctgttctctcaaattgacttcttt
gctgaccccaaaagtcctggaaaggattatcaacagtgccagttgttgatacaagaatgc
caaactctcatctccaagcccaactttgcttccattctttgttatgccattgaaaaccca
gaacacaagcagaaaaccctgcgtccatctccacagcttcttgctaacatcagcagaata
ctgaaacttaaccgagtgcaggaggtaatttttggtcttggacttctcaactcatccaat
gaagagcttaagagctatgctgggctctttgtaaagcagaagcttccggacctgctcagg
tcgtacattgatggtgacaccagcggcaggcaggaagcaggtctggctgatgttgccatt
gaagtgctacaccgccttctgtcacatgtcattcatggcccgcatgaccaggttggcgtt
ggtgatgatcaggtacaagccttcctggacaccctgcggcgggaattccccaaggatcga
gttccagttgtacttgcaccattgctgtatccagacgctcatgatgtaccagctagcaag
cttgtgccagatacaagtgccccagctaaagatgtgagagcagatgaccttgctggattg
atgcaggaaataggatatgtctgctgttcaagtgcttcagagtgcagagagacccttcag
cagtttggtatccatgacatcacagcagcagctattgctagagtaataggcatgatggtc
aagaccgctgttggtttgggccaacacattcctcttcagcagaatttaaacagcagtgca
gcagcattggacgctaagcctgatgatgatggagaagcgtcatggggagtggagatcttt
atccaagttctaaaagagcagataccaatgatgagctggcaacaagtgctcctggagcta
gactaccctggttttaaggtgacatctgttgaaggtctcaagcttctgatggctgcttgt
cagctgggtcttcaggaggcctttcctatggaacttctctataggaactggtcaaacaca
gagggacagttatcttggatatctatggctctgcataatccagatgttctgtgctttgct
gactttccaagccaccaagtgtcagttgatatccttaaggcactaccagaagatgaaagc
aaagagataaatacttggaaatcactaaacctgatagagacccttctaagactgggtgag
gctggtcactatgacgcggtgaagaacttgctcaggttccctataaagctgtgccctgac
atcttacttctcgccctcctgcaaaccaacccaacatggcagttgctgcgcaatgagctg
atcttggagttaatcccagtgtttctctcaaatcatccaaatgctgcaagtgttctgcac
tatgtttggcatggacagggacaatcttcaactgtccggcaactgaccatgaaagctatg
gcggactggtatgtcaatggagaacaagaccagaccagactctcccggatcttggatgtc
gcccaggatcttaaggcactttcaatgatgcttgttggtcaaccattctcatttgttatt
gacctggccgcactggcctcacgacgtgaatacctcaaactggacaaatggatgaatgac
aagctgagggaacaccaggaggaatttgctcaagcaaccatcacatttcttaaacggcgg
tgcccaactcttgtcggcatctcacttgacaaagaactgccaaagagcatccaactgcct
gccgagactgtgtccaccatgttgtcctgccttcaggtctacttggctaccagccaagtt
ccccctgggatggtagaggtcattcgtcagatgatagtcaaccatggccccctgatgaag
ccaagatctgcctcaaccagtggtgggggacctcagttgaaacggcaaggaagcctggac
tctgccctgcccactccccttgctggtcaagtagacccactatcaagccttggcatctcg
cctacgctgtcgagctctcctgtcacacccagctctcagctgccatctttcccccctcat
cccctcctgggttcaacgatggtctccaccagtggtttgggagcggttgggaacattggc
tctggcttgacccagcctatccagaagccgtcacctacttcccagcttggccagcttcca
acatcgtcgactagttctggcatgttgtctcctgtcttggggtcttcccagctcttccag
ccactgcagcaaggtggccttggtcagagtggttcatctactgacagctttaggatgctt
gcaggccttgggggacacaagcctctaggcagtagttccctcatgcagcagcagcagcag
caagtgcttatggctcagcaacaacagcagcgcaatcaagcagcagagaaaattagacag
gatgtctcccaagtatggccaggaatggatcaatcattcggcaaggacgtggaggatgag
gccaactcatatttccagcgaatatataaccaccctcctaacccgaccatcagtattgat
gaggtgttggagatgctgaagaagttcaaagatagcccaaataaaaaagaaagggacatt
tttctgtgcatgctgcgtaatttgtttgaggagtacagattcttccctcagtatcctgat
aaggagcttcacaccacagcttgtctctttggtggaatcatcgagcaaggccttgttacg
tatatggcccttggcatagctcttcgttatgttcttgatgcattgcgcaagccctatggc
agtaaaatgtacatgtttggtatagctgctttggacagattcaagacaaggttgaaggac
tacccacactactgccagcacctggcttctattccacacttcaaggagtttccacaatcc
ctgatagagtacattgactatggccaacagtccagggaacctccactagtgagcagaagc
ttaaaccaggactcggtgtcctcaaggctgataaacaggtcgacagggaattctggtact
gccagccccacattcattacttcatcagcaaacaaacatgcacaactaccaccttcagcc
ccggcatctccaaaaccttccacaccttcatcagaagggatgccaccagcaggtcgcaaa
gagccttctatagcgaacgccagtaacattgataccttgcttggtgcacgcgacactaca
gagattgctcaaccccccgaacaagtccaggacaagatgcattttatcttcaacaacata
tcccagagcaacttgacacagaaggcagaagagttcaagactctagtgcagcaagagtac
atccagtgggtgtcccaatacttagtcatgaagcgagctagcatagaaccgaacttccac
cagctctacatcgacttcatggaagcccttgatattcccaactttgctaatgaagtgctc
aaggagactttccggaatattaaggtgttgttgcagtcggaaaaggtccctgccaatttc
tcagatagatctctactcaagaaccttggacattggcttggccttctcacattggctaga
cataaaccaatattgatgaaggaattggacctcaagtctcttgtgattgaagcctacttc
aaaggacaacaggagatgttgtatgttgtgccatttgtggctaaggtgcttgagtcatct
gcgaaaagcaaagtgttcaagcctcctaatccatgggtgatggcaatcatggggcttctt
gttgaactccatcaagtccaagaccttaagctcaatctcaagtttgaagtagaggttttg
tgcaacacccttgccctggacatgaaggaaatcaaggcaacagaacttctgaatgaccca
gaaaggctgaaacacattccacatcagttgtcttctccagagagggacaaaatggctgct
tcaactgcaatgacgtctggcactacgagcacgagcactgccacacagcctgggctaaca
gccactccccctcccccacagtatgcttaccaagagataaatgtgacatccttggctggg
ctagctccgcacattcaagtcaaccagcagatccagttgttccaacagcacccgcacctc
aagcagtgtgtccgtccagccatcgagagggctgtccaggaactggtccaccctgtggtg
gagcgctcgatcaagatttgccttacaactgcagagatgattgtcaaaaaggactttgct
ttggatcctgaggagtcccgcatgcgtgctgcagctcatcacatggtccggttcatgact
gcaggcatggcgttgatcacctgtcgggagccgctccttatcagcattaacaacaacttg
cgcaacagcttccttgctgcactgaggacagcgaaccaacagcagaaggagatgatagaa
caggcagcatcagtcgtgagtgaggagaacacagagctagcatgctccttcattcagaaa
actgctgtggaaaaagtccttccagagatggacaaaagactagctaccgagtttgatgtg
agaaggcatgcccgtagtgagggtaggagatactgtgatccggtcatacttacctatcaa
gcagagagaatgccagaacaaatacgactcaaggttggaggtgtgaacgcgagtcagact
gcagtctatgaggagtttgcccgtagcattcctggctttaaactgccacctgctggtgaa
accatcaacactccttccatgccaaagcaggtgtatgaccacggactccttacaagttca
gagtcatccattccacctgtgcatgaagacttccgtccagtagacaagccctcagtagaa
ggcagtgccttcatgcatgccttcccgcagtcctacaacatgccagatgaggttgtccag
ctcttagggaagtgtgtagaggggatagagcaacacttgcatgctattatggccccacct
tcaagtccacctgttgtcgctatccataacttgagggaagcagtcattcaggccagaatc
tctcgtgataacatggcagcagtcagactccttcagaaggcaactgaagggcttctggat
ggaattacacctatgccaagtgatcaggagctcgcgttacgcttccgtgactgtcactta
attgtgttacggggcttgcaggaccatcgggcatatgggcccgtatgggcctccaagcat
gtcaccaagtttgtgtgtgactgccctccggatctcaaattcaatgtggaagcgattgac
cttctggttcgtagccacctgctgagtgctcctgagtttgacctgcatcttgttcagtgc
attgaaaatggacacaatctcagtgctctccactttgccatccagcttgtcaaattcatg
gctgacgaaaagcatgggaatgagggcgatatgtttaatgcaacatttgaggctttgacg
agaattgcacgtaaccgccagaacccagaaggactgtcttcattgttggagactgtgcat
aatgggccgtccaacgcgttgagccaccatgatgttcctgaaaacaaggccccaggtgga
cccacctccctcacacctaacgtcctcaccacatttccagggtttgaagacccaccaggg
ctacacgataaggttgaataccttctcagggagtgggttcgcttgtgtcatcagcccgga
gctggcaaagacagtgaaaaggcattctctacttttgttgctctgatgcaccaacaaggc
atcctccgatcggacgatctgataacccgctttttccgcatctgcacggagctgtgcgtg
gaagtgacttacagagccctcggagatcatcccaacagcccgacacaagctcgtggcaaa
tgctttaacacactggacgcgtactgcaggctgatagcactgctggttcgacactcggga
gatgcctccaacaacgtgacaaagattaacctgctgaaccgggttctaagtacagtagca
acagttttattccaagaccacgagcttcgccatgctgacttccaacagctgccataccat
cgcatcttcatcatgctgctgctggagctcaaccagccagaacccgtgcttgaggctatt
aacttccaggtattgcagacgttcagcaccgtgctccacgcactcaagccgtcgcgcgcc
cctgggttcgcatatgcctggctagagctcatttctcacaggctgtttatgtccaagctg
ctgctcaacacgcctcagcagaagggctggatgctattccagcaactcctgattgatctc
ttcaagtttttggcgcctttcttgagaaatgctgagcttgcaaagcaaacccatctcctt
tacaagggtacattgcgggtgttgttggttctgctgcacgacttcccagagttcttgtgc
gactatcactttagcttctgtgacgttatcccaccaaactgcatccaaatgcggaacttg
attctgagtgcattccctcgcaacatgcgtctaccagaccccttcacccccaaccttaag
gttgatctccttacggatataacccactcgccgcggatcctgaacaattttgtggcgtcc
atacagccggcaagcttcaagaaggatctggattcctacctgaagacccgtgcaccggtc
acattcctgacagaactgagaagtcatctccaggtgtcgaccgagcctggcacgaggtac
aatgtacctctgatgaactccctagtcctgtacgtgggtacccaggccatcacgtacatc
cacagcaagagcgccacgccctccatgtctactatcacccactcgtcgcacatggacatc
ttccagaaccttgcggtggatttagacactgagggccgatacttgttcttaaatgcgatt
gccaaccagctgcgctacccgaacagccacacccactacttcagctgcgtactgctgtat
ctgtttgcggaagccaacactgaggctatacaggaacagattacaagagtgctgctggag
cgactgatcgttaacaggccgcacccttggggtctactgataaccttcattgagctgatc
aagaaccaccagtacaagttctggacacatgagttcgtgcactgcgcacccgagattgag
aagctgtttgaatctgtagcacgaagctgtatgcagcagaagcaggtagcaacaagggag
agtacgagtgaagccgtcagagagtag
DBGET
integrated database retrieval system
