Neodiprion virginianus: 124303842
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Entry
124303842 CDS
T09046
Name
(RefSeq) transient receptor potential-gamma protein isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
nvg
Neodiprion virginianus
Pathway
nvg04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
124303842
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nvg04040
]
124303842
Ion channels [BR:
nvg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124303842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_3
Ank_4
Ank_5
Pho88
Holin_BhlA
Motif
Other DBs
NCBI-GeneID:
124303842
NCBI-ProteinID:
XP_046617536
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All DBs
Position
4:complement(21272057..21378358)
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AA seq
1258 aa
AA seq
DB search
MTGTFRRSVSTESAGEDEESIAGGIGLAGDQEGEGRRSSGGSFPLRMAAAMRARSGTGGF
LRGPPASNPNYDPEAPPQPPLFLQSTMQTANLLEKPEIDKKVKRHSIHGMMEEENVVRPH
QEMASLTLDEKKYLLAVERGDIASVRRMLQRAQETDYTNINCVDPLGRSALLMAIDNENL
EMVELLIEHRVDTKDALLHAISEEFVEAVEVLLEHEESFHRSGDPHVSSSVSSACRLPSW
EALPPDTATFTPDITPLILSAHRDNYEIIKILLDRGATLPMPHDVRCGCDECVTSRMEDS
LRHSRSRINAYRALASPSLIALSSKDPILTAFELSWELRRLSFLEHEFKLEYQELRRQCQ
DFATALLDHTRSSYELEVLLNHDPTGPAFEHGERMHLNRLKLAIKLRQKKFVAHPNVQQL
LASIWYEGLPGFRRKNILLQALETMRIGILFPFLSVAYIIAPHSVVGQTMRKPFIKFICH
SASYFTFLFMLILASQRIENLLGIGDSSELEKRGEMPSPVEAFIIAWVSGLIWSEVKQLW
DVGLEEYVHDMWNVIDFVTNSLYVATLALRIVAYYRVQEEKQKLTDSERLRREEWDAWDP
MLISEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVMDIMKFFFLYVLVLFAFSCG
LNQLLWYYADMEKKRCPSNSSDISSTNSTANSNNNSCVLWRRFANLFETTQTLFWAVFGL
VELESFELDGIKVFTRFWGMLMFGTYSVINIVVLLNLLVAMMNHSYQLISDRADTEWKFA
RSKLWISYFEEGGTVPPPFNIIPAPKSAWYIGQWIYRKLCGHRRAAKKEHMRTIRRKVKQ
ASERDFRYQTIMRNLVRRYVTVEQRKAEGEGVTEDDVNEIKQDISAFRCELIEILKNSGM
NTSTATGAGGGGSFKALSLGAGGKKNRQKERRLMKGFNIAPQPGGSGTLPPVAEFIASLQ
QAHHEHAHHDLFGSTLSGIFGPGATPKKHPHHTSTNSVPGLTTGPRPPRGTRESSRKRRW
GTLIEAAKVGRVSKLIAGRSRSEDSVYSPASDDGSRSDGSSDSKSSLDVTTPDSHAHQHV
HSHHHHPHDVHHMFSHGLGPALAALRKKRKKFSASRASTPAMASHTNPVESVMHPITSAL
ALKVTRKQLQRASSVPTRGPETVIPPITPRCHEVTQSQQPSLDAVEMIASHEAQGVIVAA
GPLTPSTTEESVIATATGTGTGTPVSLTSVKRNGSATQLQRLPGIEPISGHDVSAGWL
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgacaggaacattccggagatcggtgagtacagagagcgcgggggaggatgaggagagc
atcgccgggggcatcggcctggcaggcgaccaagagggcgaaggaaggagaagtagcgga
gggtcgtttccgctgagaatggcggctgcgatgagggcgcgttccggtaccggcggattt
ctccgcggccctcccgcgtctaacccgaactacgacccagaggctccaccgcaaccaccc
ctatttttacagtctacgatgcagacggccaatctactcgagaaaccggaaatcgacaag
aaagtcaagaggcacagcatacacggaatgatggaggaggagaacgtagttcgacctcat
caagaaatggcaagtctcactctggacgaaaaaaaatatctactggcagttgaacgtggt
gacattgcttccgtaagacgaatgcttcaacgtgcccaagaaaccgactacacgaacatc
aactgcgtggatcctctgggaaggtctgctcttttaatggcaatcgacaacgagaacctg
gaaatggtagagctactaatagagcatcgggtagataccaaagatgccttgctccacgcc
atctcagaagaatttgtggaggctgtcgaggttcttctagagcacgaggagagcttccac
aggagtggagatcctcacgtaagcagctctgtgtcgtcggcttgccgcctgccaagttgg
gaggcacttcctcccgatacggccaccttcaccccagacatcactccgttgattctttcc
gcgcacagagacaattacgaaatcattaagatcctgttagacagaggcgccacgttaccg
atgccgcatgacgttcgctgtgggtgtgacgaatgcgtaacatcacgaatggaagattct
ctgaggcactcacggagcagaattaacgcttaccgggctttggcatcgccgtctttgata
gcactttcttccaaggaccccatacttactgcgttcgaactttcgtgggagcttcggcgg
ctgtctttcctcgagcacgaattcaagcttgaataccaggaactgagacgacagtgccag
gacttcgcaacagctttgctggatcacacgaggagttcttacgaacttgaagtgctcttg
aaccatgaccccacgggaccagcctttgagcacggggaaaggatgcacttgaaccgtctg
aaattggcaataaagttgcgtcaaaaaaagttcgttgcacatcctaacgtgcagcagctg
cttgcatccatttggtacgagggactgcctggtttccgtcggaaaaatattttgcttcaa
gccttggagactatgcggattggaattctcttcccatttctcagcgtggcttacatcata
gcacctcacagtgtcgtcggtcagactatgagaaaacccttcatcaagttcatctgtcat
tccgcctcatacttcacgtttctgttcatgttgattcttgccagtcaaagaatagagaat
ctacttggaattggagattcttcagagctagagaaaagaggagaaatgccctcacccgtc
gaagcattcatcatagcgtgggtttccggactgatatggtcagaggtgaaacagttgtgg
gacgtcggtttggaggagtatgttcatgacatgtggaacgtgatagactttgtaacgaac
tccttatacgtggctactctcgcgttaaggattgtggcctactaccgagtgcaggaagaa
aagcaaaaactcactgacagtgagcgtctccgtcgggaagaatgggatgcgtgggatcct
atgttgatttccgaaggactcttttcggctgctaatattttcagctcgctgaagcttgtt
tacatcttctctgtaaaccctcatctgggacctttacaagtatcgctatccaggatggtg
atggacatcatgaagttctttttcctctacgttttggttcttttcgcgttttcatgtggc
ctcaaccaactcttgtggtactacgctgacatggagaagaaacgttgtccatccaatagc
tctgacatctcgagtaccaacagtacagcaaattccaataataattcttgcgttttgtgg
agaagattcgctaatctattcgagacaacgcagaccttgttctgggcggtgtttgggctc
gttgaactcgagagttttgagttggacggaatcaaggtgttcacaaggttctggggaatg
ctcatgtttggcacctactcggtcatcaacatcgtagttcttctgaatcttctcgttgcc
atgatgaatcactcctatcagctgatatccgaccgtgctgacactgagtggaaatttgct
cgtagtaagctgtggattagttactttgaagaaggtggtacagtacctcctccattcaac
atcattccagcaccgaagagtgcctggtacatcggtcagtggatttatcggaagttgtgt
ggtcacagacgtgccgcgaagaaagagcacatgcggacgatcaggcgaaaggtgaaacag
gcatcagaaagagacttcaggtatcaaacgatcatgcgtaatcttgtaaggcggtacgtt
acggttgaacaacgcaaggcagaaggcgaaggtgtcactgaggacgacgtgaacgagatc
aagcaagatattagtgccttccgatgcgagcttatcgagatcttgaaaaattctggcatg
aacacgtcaacagcgaccggcgctggaggcggtggtagctttaaagcactgtctttaggt
gctggtggaaagaagaaccgacaaaaagaacggagactgatgaaagggttcaacatcgcc
cctcaaccaggaggaagtgggaccttaccacctgtggcagaattcatagcctcccttcag
caagcacaccacgaacacgctcaccatgacctctttggtagcaccctcagtgggattttc
ggtcctggagcgacaccaaagaaacatcctcatcacacaagtactaacagtgtcccaggt
cttacgacaggtccaagacctccaaggggcactagagaaagttctagaaaaaggaggtgg
ggcaccttaattgaagctgcaaaagtgggacgcgtgtcgaaattgattgcaggtcgatct
cggtcggaggattcagtttattcaccagcatcggatgatggctcccgatctgatggttca
tcggactccaagtcatctctagacgtcacgacgccagattcgcatgctcatcagcatgtc
cattcccatcatcatcatcctcacgatgtccaccatatgttttcccacggtttgggacca
gctctagcagcactgcgaaaaaagcggaagaaattttcagcatctcgtgcttcaacgcca
gcaatggcgagccataccaatccggtagaaagtgttatgcatccgataacctccgcccta
gcattaaaggtcaccaggaagcagttgcagagagcaagcagcgttccaacgagaggaccc
gagactgtaatacctccgatcacacctcgatgtcacgaggttacccagagtcagcagcca
agtttagacgcagttgagatgatcgctagccacgaagcacagggagttattgttgccgcc
gggccattgacgccatcaacgacggaggaaagtgtcatcgcaactgcaactggaaccgga
actggaactccagtttcattgacatcggtaaagagaaatggttccgccacccaattgcaa
cgattgccaggcattgagcccatctctggccacgatgtgtctgcgggatggctgtga
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