Nasonia vitripennis (jewel wasp): 100114396
Help
Entry
100114396 CDS
T01081
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
nvi
Nasonia vitripennis (jewel wasp)
Pathway
nvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100114396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvi03019
]
100114396
Messenger RNA biogenesis [BR:
nvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100114396
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100114396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
CNOT1_1st
TFIIA
PAT1
V_ATPase_I
Spore_coat_CotO
eIF-3_zeta
DDHD
DUF2828
Motif
Other DBs
NCBI-GeneID:
100114396
NCBI-ProteinID:
XP_008217460
NASONIABASE:
NV18106
UniProt:
A0A7M7LSC3
LinkDB
All DBs
Position
1:19504284..19517766
Genome browser
AA seq
2448 aa
AA seq
DB search
MNLDSLSFTLSQISYLVANLCKKNFWDSCREISVLVRWKGLEADRHLLRCLFSHIDLSTG
EPPEPNSKDYYQVQLLKQECNSLLLKPSFVSNLCFAIDYPFHRKNQILPSPKFFQNLRKI
LGLSLVHEVVFAIALQRSQNSEISACATEHLKKQLSELIKNHVNTDDNKKQKEGGLQDTS
PEILQLILTYIPETAIDNKLSLDTKETFLNSLRRDFPRELVPVVLRPLLYPGDGEVSEDS
TDSIMATNQMDNTNLVELIMELGYGFTSSVEECRNSLASLGARELTPRCVAKILGYMART
CSGLEDAGGLHSFWENSGANQDNKEKSGDAPITWNIEVFVQAVKEVNASLSWNEVLSKLD
HPEFIIKDRQALNLVISAIRMGLQSQGYPPDVFPVEVFYRHWENLKGQFSIVQHIIKHPD
IFCFADYAYHSVTIDVLKAAPEIDNKEALTWRSLNVVELLLYMAERGLQVAVQDLFKWPI
QHCPDVLVLSLLQIQPPITMFRQELLSALMPIFLGNHPNSAVILHHAWHTNNVKIKTIIM
HSMAEWYLRGEHDQTRLSRILDVAQDLKALSVLLNAQSFPFVIDLACLASRREYLKLEKW
LTDKIRDHGEAFVAACVKFLQRRCPQVLGSGIKEDPTMSKASQLPQETLTTILHCLQVCV
GSVSQECADAILGMVQNCSLMLSKGTLSRLPPPVLRHRPLDTFNPALSGQLFSTKQVDTL
SNLNSSLASMSLSTSLGPPNNSAFNLPGTLGPLVSAPGSPSRLMGPSPSPFPMLPLSSQL
HSGPVGTQGSSVIPGGAAIGGLNRMGPPSGIEKTRIPETSNLFPDMSQNVSKEIEDEANG
YFQRIYNHPPHPTLSIDEVLDMLKRFQDSTIKRERDVFHCMLRNLFEEYRFFPQYPDKEL
HITAQLFGGIIERGLVTSYMTLGLALRFVLDALRKPEGNKMYYFGIAALDRFKSRLKEYT
TYCDHVRSIPHFSEFPPHLIEYVEFGLQGQEPPSRPQGQVLPKSLAAMLAPATTPFKTIA
TTTVTTSTTQAKPSTTPTTSLSARPSIANATNIDTLLVATDKEEKITAPPETLQDKTAFI
FNNLSQLNLQQKCDEIRDIVTEEYWPWMAQYLVMKRASIELNFHALYSNFLDCLKVSEVN
RMVTRETFRNIKVLLRSDKGIANFSDRSLLKNLGHWLGMLTLGRNKPILQVDIDLKSLLV
EAYCKGQQELLYVVPFVAKVLESCAKSRVFRPPNPWTMAIMNVLAELHQEPDLKLNLKFE
IEVLCKNLSIDVAELKPAIYLKDPDKLVNLEYQLSQPNKKLQEVSNNVTSQQQQQQPQQQ
PQEQGPVEDLVGQSRAVQQQHQHQQQQQQQQQQQQQQQQHQQQQQQQQQQQQQQQAAPVN
TTPSLPTGPPEPRFNYMDINVTSITNIAPHITINNNLPLFQAHPNLKPFVRQAVERAIQE
WIHPVVDRSIKIALTTTEHTVKKDFALDPDESKMRTAARQMVRNLTAGMAMITCRDQILS
SISSNLKNAFLMAIIGTQPTQKDLAEQAANVVAADNMELACAFVQKTAVEKAIPEMDKRL
LNEIELRKIARQEGRRYCDPLAKYQAERMPEQIRLKVGGVTVQQMAVYEEFARNIPGFLP
LSERDTQTLFVPKAIAESSLIQPFSASTPAPMAVAPAQQQVAYAATAVGNDEVGSLLEKL
ANEVEVLLTTMGPSTPPPQHATLHSLLESLILTRRSRDAGAAMVLLKKAVEGLLDGPTLS
SGVMDSEITMRYRELHLRILKCLQHPRGYGMQWTNKNITRCLIECREEFRYNFEAVDCLI
RSHLVSLPQYDLALAQAMENGSAMATAFTMQLVQLYLIDERQTTHVTEPDLFHSIEILAR
MSVHRAPPEGISLYRLNTLIDSLRISNDPTTLTDRAPAGPTAHIHSGILQVRARDFEDPP
GLVEKTEYLLREWVTMYHNPTHARDPTKAFGVFVHQMNIHGILKTDDLITRFFKLSTQMC
VDHCYRALSETNTAPSVVRAKCFHTLDAFVRLVALLVKHSGDATNTHTKINLLNKVLGIV
AGVLLQDHEMRGVDFQQLPYHRIFIMLFLELCAPEPVLEAVNYQVLTAFCHTLHILRPAK
APGFCYAWLELVSHRVFIGRMLAITPQQRCWGIYAQLLIDLFRYLAPYLRNAELAKPVTL
LYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQMRNLILSAFPRNMRLPDPFTPNL
KVDMLQEISLAPRVLTNFATLIQPVTFRKELDSYLKARAPVTFLGDLRTNLQVVSQEAGM
RYNIQLMNALVLYVGTQAIAFIRSKGHTPNMSTIAHSAHMDIFQNLAVDLDTEGRYLFLN
AIANQLRYPNSHTHYFSCTLLYLFSEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIE
LIKNPTYKFWQHEFVHCAHEIEKLFESVARSCMVQKQVQPTPEPEIPE
NT seq
7347 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactcgttgtcttttactttatcacaaatcagttatttggttgcgaatttg
tgtaagaaaaacttttgggacagctgccgggaaatatcggttttggtacggtggaagggt
ctggaggcagaccgacatttgttgcgctgtttgttctcacacatcgacctttcgactgga
gaaccaccagaaccaaactccaaggactactaccaagtacagttgctgaaacaagagtgt
aacagcctcttgctcaaaccatcatttgtttcaaatctctgttttgccatcgactatcca
ttccatcgaaaaaaccaaatcttaccatcaccaaaattttttcaaaatttacgtaaaata
cttggattatcattggtgcatgaggttgtttttgctatagctttacagcgctcacagaac
tcagagatatctgcttgtgcaactgaacacttaaagaagcagttatctgagctcataaag
aatcacgtcaatactgacgacaataagaagcaaaaggaaggaggtctccaggatacttca
ccagaaattttacagcttatactaacttatataccagaaacagcaatcgataataagtta
tccttagatactaaggaaacatttttaaatagcttaagacgtgattttccccgtgaactg
gtaccagtggttttaagaccacttctgtatccaggtgacggggaagtctcagaagatagc
actgactcaatcatggctacaaatcaaatggataataccaatttggtagagctgattatg
gaattaggctatggttttactagcagcgtagaagaatgtcgaaacagcttagcgagcctc
ggcgctcgagaactaacccctcgatgcgtggccaaaattctcgggtacatggcccgcacc
tgcagtggtctggaagatgccggggggttgcactccttttgggaaaactccggtgcaaat
caggataacaaagaaaaatcgggtgatgctccaatcacgtggaacatagaagtttttgta
caagctgtcaaagaagtaaatgcatcgttatcatggaacgaagtactatcaaaactcgat
cacccagaatttataatcaaagatcgtcaggctctcaacctggtgataagtgctataaga
atgggtttgcaaagtcaaggctacccacctgatgtgttccctgtggaggtattttatcgc
cattgggagaacttgaagggacagttttcaatcgttcagcatatcataaagcatccggat
atcttttgcttcgccgattatgcataccattctgtcacgattgacgttcttaaggcagca
ccagagattgacaacaaagaagcactaacctggagatctctgaatgtcgttgaattattg
ctctacatggctgagagaggtctacaggtggccgttcaagatttattcaagtggccaata
cagcactgtccggatgtacttgtgctatcgttattgcaaatccaaccaccgattacgatg
ttcagacaagagcttttaagtgcccttatgccaatatttttgggcaaccatcctaatagt
gcagtaatcctgcatcacgcatggcataccaacaatgtcaagatcaaaaccatcatcatg
cactcaatggctgagtggtacctgcgaggcgaacatgatcaaacacgactttcacgcata
cttgacgttgcccaggatcttaaagctttgtcagtccttcttaatgctcagtcttttccg
tttgtcatcgatttggcctgcttagcttcacgtcgagagtacctaaaacttgagaaatgg
ctcacagacaaaatcagagatcatggcgaagcctttgttgcggcctgtgtcaagtttcta
caaagaaggtgtccccaagttttgggatctggaattaaggaagatccaaccatgtccaaa
gctagtcaactacctcaggaaactcttacaaccatcttacactgcctgcaagtttgtgtt
gggagtgtatcgcaagagtgtgccgatgcaattttgggtatggtacaaaattgcagtttg
atgttgagcaaaggaacgcttagcagattaccaccgcctgttctcagacatagaccactt
gatactttcaatccagctttaagcggacagctattctccacaaagcaagtggacacctta
tcaaatctcaactcaagtttggcctcaatgagtttgagcaccagccttggtccacctaac
aactctgccttcaatttgccgggcaccttgggtcctttagtatcggcgccaggctcgcca
tctcgtctcatgggcccgtcgccatctccatttccaatgttgccactctcctcacagttg
cattcgggtccagtgggcacccaaggctcctctgtaatacctgggggagcggcaattggt
ggtctcaacagaatgggtccaccatctggcatcgaaaaaactcgtattcccgaaacttca
aacctatttcccgatatgagccaaaatgtatccaaggagattgaggacgaagccaacgga
tacttccagcgaatctacaatcatccaccacacccgactttgtcgatcgatgaggtcctg
gatatgctcaagaggtttcaggactcgaccatcaaaagagaacgcgatgtcttccactgt
atgctgcgcaacctctttgaagagtatagattctttcctcagtaccctgataaggaatta
cacatcacggctcagttgttcgggggtataatcgaacgaggcctagtgactagttatatg
acactcggcttggctctgcgcttcgttcttgatgccttgcgtaaaccggagggtaacaag
atgtactactttggtattgctgctctggaccgcttcaagtcacgcctcaaggagtacaca
acctactgcgaccatgtacgtagcattccgcatttcagtgagttcccgcctcatctcatc
gagtacgtagagtttggattgcaaggtcaagagccaccctcacgccctcagggccaagta
ttgcccaaatccttggccgcaatgctcgcgccagctacaacgcctttcaagactattgcg
acgactacagttaccacaagtacaacccaagctaagccttctacaacgccgaccacatcg
ctttccgccagaccttctattgctaatgccacaaacattgataccctgctagtggctaca
gacaaagaagagaaaatcactgcaccacccgagactttacaagataaaacagcttttata
ttcaacaatttgagtcagctcaatctgcagcaaaaatgtgatgaaatcagagatattgtt
accgaggaatactggccgtggatggcgcagtatcttgtgatgaagagggcgagtattgaa
ctgaactttcacgctctttactccaattttttggattgtctaaaggtgtctgaagtaaat
agaatggtaactcgggaaaccttcaggaacataaaagtattgcttcgaagtgataaaggc
atcgcaaacttttcggatcgttctttgctgaagaatcttggtcactggttgggtatgctt
acccttggccgaaacaaaccaattttacaagttgacatagacctcaaaagcttgctagtt
gaggcttattgcaaaggtcaacaggaacttttatacgtcgtgccgtttgttgccaaggtt
ctcgagagctgtgcgaaaagtcgagtttttcgcccgccaaatccttggactatggctatt
atgaatgtacttgccgaactccaccaagaaccagatttaaagttgaatcttaaatttgag
atagaagttctctgcaaaaacttgagcattgatgtggctgaattaaagcctgcgatttac
ttaaaggatcctgataaacttgtcaatttagagtaccagttatcgcagccaaataaaaaa
ctacaagaggtatctaataatgttaccagtcagcaacagcaacaacaacctcagcaacaa
ccacaggaacagggacccgtcgaagatttagtaggacagagtcgagctgttcaacaacag
caccagcaccagcagcaacagcaacagcaacaacaacaacagcagcaacaacagcagcat
caacaacaacagcagcaacaacagcagcaacaacagcagcaacaagcagctccggttaat
accacaccgtcattgcctactggaccacctgagcctcgtttcaactacatggatataaac
gtcaccagtatcaccaatattgctccgcacatcacgatcaacaacaatctaccacttttt
caggcacaccccaaccttaagccatttgttcgacaagccgttgaacgcgctattcaagaa
tggattcatccagtggttgatcgttccatcaaaattgctctaactacaactgagcatact
gtaaaaaaggactttgctctcgatccagatgaatccaaaatgcgcacagcagcacgtcaa
atggtccgcaatctcactgcgggaatggctatgatcacttgtcgtgaccagatcctatct
tctataagctcaaacctaaagaacgctttcctcatggcaatcatcggtacccaacccaca
cagaaagatttagcggagcaagccgcgaatgttgttgctgcagataacatggagctagct
tgtgccttcgtacagaagactgctgttgagaaagccattcccgaaatggacaaaagattg
ctcaacgagattgagctacgcaaaattgccagacaagaaggtagaagatattgcgatcca
ttggccaagtatcaagctgagcgtatgcctgaacaaatccgactaaaggtcggtggtgtg
acagtccaacaaatggccgtgtacgaagaattcgctcgcaacatcccgggtttcctacca
ctttccgaacgcgacactcaaacacttttcgttcccaaagcaattgccgaatcttcatta
attcaacctttttctgcaagtacacctgcccctatggccgtggctccagctcagcaacaa
gtcgcatatgccgctactgctgttggcaatgatgaagtaggctctttactagaaaagctt
gcaaatgaggttgaagttttactgaccacaatgggcccgagtacgccgcctccgcagcat
gcgactctacacagtttgctcgaatcattaattctgacaagacgctctagagatgctggt
gcggcgatggtcttgctcaaaaaagccgttgagggtttgttagatgggccgacgctttca
agtggcgtcatggattccgagatcaccatgaggtacagagaattgcatttaaggatactt
aaatgtttgcaacacccgagaggttatggtatgcagtggacaaataagaacatcacaaga
tgcctcattgaatgtagagaagaattcagatataatttcgaggctgtcgattgtctcatc
agatctcatttagtaagcctacctcagtatgatctagcattggcccaagccatggaaaat
ggtagcgcaatggctacagcttttacaatgcaactagtccaattgtatctaatcgatgag
agacaaacgactcatgttaccgaacctgatcttttccacagtattgaaatacttgcaaga
atgtcagtccatagagctccacctgaaggcatatcgctctacagattaaatacactaatt
gattcactgcgtatcagtaacgatcccacaacacttacagacagagcgccagcaggtccc
actgcccacattcactctggaatcctccaagtaagagcgcgtgactttgaagatcctcca
ggtttggtagaaaaaacagagtacttactgcgcgagtgggttacaatgtatcacaatccg
actcatgcgcgtgacccaacaaaagcttttggtgtctttgtccaccagatgaacattcat
ggtatcctgaagaccgacgatctcattacacgcttcttcaaacttagcacacagatgtgc
gtggaccactgctatcgggctctctcagagacgaatacagccccttcggtcgttcgggct
aaatgtttccatactttggatgcctttgtcagattagttgccctgcttgtcaagcattct
ggcgacgcaactaacactcatacaaaaatcaatttgttgaacaaagtcctgggtattgtc
gcaggtgtacttcttcaggatcacgagatgcgtggagtcgacttccagcagctgccctac
catcgaatctttattatgttattccttgagctgtgcgcacctgaacctgttctcgaggct
gtcaactaccaagtcctgaccgccttttgccatactctgcacattttacgtccagccaag
gcccctggattctgctacgcttggctcgaacttgtctctcatcgtgtctttataggtcgt
atgcttgccatcacgccacagcaacgatgctggggtatctacgcccagctacttattgac
ctattcagatatcttgcgccttatctacgaaatgctgagttggccaagccagttacacta
ttgtacaaaggaacgttacgagtattattggtgctattgcatgattttccggagttcttg
tgtgactaccactatggtttctgcgatgtcataccgccaaattgcatccagatgcgtaat
ttaattctaagcgcattcccgcgtaacatgcgtctaccagatccattcactccgaatctt
aaggtggatatgctgcaagagattagccttgcaccgcgggtactcacaaactttgccacg
ttaatacaacctgtaacgttcaggaaggaacttgactcatatcttaaagctcgtgcacca
gttactttccttggagatctacgcaccaacctccaggtagtatctcaggaagccggcatg
cgctacaacattcagctaatgaatgccctagtcctgtatgtgggaacacaggcaattgct
ttcatccgtagcaaaggtcacacgccgaacatgtcgacaattgcgcactcagctcatatg
gatattttccagaatcttgctgttgatctagacactgagggtcgctatctttttttgaac
gccatagcaaatcagttgcgctatcctaatagccacacgcactacttcagctgcacactg
ctctatctgttctccgaggcaaacaccgaagccatacaggagcagataactagagttttg
ctagagagactaattgtcaaccggccccatccatggggactactgattacttttatcgaa
ctcataaaaaatccgacctacaagttctggcagcatgagtttgtgcattgcgcacacgaa
atcgaaaaattatttgagtcggtagctcgttcgtgcatggttcaaaaacaagttcaacca
actccagagccagagatcccagagtga
DBGET
integrated database retrieval system
