Nasonia vitripennis (jewel wasp): 100117640
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Entry
100117640 CDS
T01081
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
nvi
Nasonia vitripennis (jewel wasp)
Pathway
nvi03022
Basal transcription factors
nvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100117640
09124 Replication and repair
03420 Nucleotide excision repair
100117640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvi03021
]
100117640
03400 DNA repair and recombination proteins [BR:
nvi03400
]
100117640
Enzymes [BR:
nvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100117640
Transcription machinery [BR:
nvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100117640
DNA repair and recombination proteins [BR:
nvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100117640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
TniB
AAA_22
Motif
Other DBs
NCBI-GeneID:
100117640
NCBI-ProteinID:
XP_031783608
NASONIABASE:
NV14701
LinkDB
All DBs
Position
3:complement(14211000..14215742)
Genome browser
AA seq
802 aa
AA seq
DB search
MGPPKRFKKETDRGKWKRRKEDHDPDYNIDDDGNDDAETEGIPDAAKNDVEKQDHGAIED
EYGAKDYRSQMILKPDNESRPLWVAPNGHIFLESFSPVYKHAHDFLIAISEPVCRPEHVH
EYKLTAYSLYAAVSVGLQTHDIIEYLKRLSKTSIPDGIIEFIKLCTLSYGKIKLVLKHNK
YFVESPFPEVLQKLLKDPVIQECRLRKTVDDTAKDKDGFITNVLAKTKVPQFGAKTVTTL
PQPAVAGATTLPADGSVTQTEEEKVPDDITKFYDKIDKEDEDEEEQELKTVSFEVNQEKI
EVIQKRCIELEHPLLAEYDFRNDTVNEDINIDLKPSTVLRPYQEKSLRKMFGNGRARSGV
IVLPCGAGKSLVGVTACSTVRKRALVLCNSGVSVEQWKQQFKMWSTADDSMICRFTSEAK
DKPMGCKILITTYSMITHTQKRSWEAEQTMKWLQEQEWGIMVLDEVHTIPAKMFRRVLTI
VQSHCKLGLTATLLREDDKIADLNFLIGPKLYEANWLELQKNGHIAKVQCAEVWCPMTPE
FYREYLSCKMTRKLLLYVMNPNKFRACQFLIRYHERRGDKTIVFSDNVFALKHYAIKMNK
PYIYGPTSQGERIQILQNFKYNTKVNTIFVSKVADTSFDLPEANVLIQISSHGGSRRQEA
QRLGRILRAKKGAIAEEYNAFFYTLVSQDTMEMNYSRRRQRFLVNQGYAYKVITKLAGMD
DEPDMMYKTREEQGQLLQQVLSASDVDADEERIPGEGPRPMVRKAGNMASLSGADDAVYY
EYKRSAASSTANKHPLFKKFRT
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgggaccgccgaagcggttcaagaaggagacagatcgggggaaatggaagaggcgaaag
gaggatcacgacccagattacaacatcgatgatgatgggaatgacgatgccgagactgag
ggtatacccgatgccgctaagaacgatgtcgagaagcaggatcacggcgcgatcgaggac
gagtacggcgccaaggattatcgctcgcagatgatcctgaaacctgacaatgaatcgaga
cctctgtgggttgcgccgaatggtcacatcttcttggaatccttttcaccagtttataag
catgcgcatgacttcctcattgcgatttcagaaccagtctgtcgtccagaacacgtgcat
gaatacaagttgacagcttactcgctgtacgctgctgtcagcgtgggtcttcaaacacat
gacatcatcgaatacttgaaaagactgagcaaaacaagcattcccgatggtattatagaa
tttataaagctttgtactttgtcgtatggaaaaattaaacttgtcttgaagcacaataag
tattttgtcgaatcgccttttccagaagttttgcaaaagttattgaaagatcctgttatt
caagaatgtagattacgaaagacagtcgatgatacagccaaagacaaagatggtttcatt
acaaatgttttggctaaaactaaagtaccacagtttggggcaaaaacggtcacaacttta
ccacaacctgctgtagcaggtgcaaccacactgcctgccgatggttcagtaactcaaaca
gaagaggaaaaagttcctgatgatatcactaaattttatgataaaattgacaaagaagac
gaagatgaagaggagcaagaattgaagactgttagttttgaagttaatcaagaaaaaatt
gaagttattcagaagagatgcatcgaattagaacatccactattagcagagtatgatttt
cgtaatgatactgtgaacgaagatattaacattgatcttaaaccatccactgttttgagg
ccttatcaagagaaaagtttacgtaaaatgtttggaaacggtcgtgcaagatctggtgtg
attgtattgccttgtggtgccggtaaaagtttagtgggcgtgactgcatgtagtacagta
agaaagcgagctttagttttatgcaattctggcgtatcagtggaacaatggaagcagcaa
ttcaaaatgtggtcgactgctgacgattctatgatttgccgatttactagtgaagccaaa
gataaaccaatgggttgtaaaattttaattacgacttactcgatgataacgcatacacaa
aaaagatcttgggaagctgaacagacaatgaaatggctgcaggagcaagaatggggaatc
atggtcttagatgaggtacatacaattccagcaaaaatgttccgaagagtattgacgatt
gttcagtctcactgtaaactgggattaacagcgacccttttaagagaggacgacaaaatc
gctgatcttaatttccttattgggccaaagctttatgaagcaaattggttagaattgcag
aagaatggacacattgctaaagtacagtgtgctgaagtctggtgtccaatgactcctgaa
ttttacagggaatatctaagctgcaaaatgactagaaaattgcttttatatgtgatgaat
ccgaataaattccgtgcctgtcagtttctgattcgttatcacgaaaggcgtggtgacaaa
actatagttttctcagataatgtatttgctttgaaacattatgccatcaaaatgaataaa
ccttatatttatggacccactagtcagggtgaaagaattcaaattttacaaaacttcaag
tacaatacaaaagttaatacgattttcgtgagtaaagttgctgatacatcgtttgacttg
ccagaagccaatgtgcttatccaaatttcttcacatggtggttctcgaagacaagaagct
cagcgactgggtcgaattctgagagctaaaaaaggagccattgctgaagaatacaatgct
ttcttctatacgttagtttctcaagacacaatggagatgaactattcacgaaggagacag
cgttttcttgttaaccaaggttatgcatacaaggtcatcacgaagcttgctggaatggac
gatgaaccggacatgatgtataaaacgcgagaagagcagggtcagctgttgcagcaggtc
ttatctgcgagcgatgttgatgcggacgaagagagaattcctggtgaaggacctcgtccg
atggttcgcaaggccggcaacatggcttcgctatctggggctgacgatgctgtttactac
gagtataaaagatccgctgcctcttctacggcgaacaaacacccgctgttcaaaaaattc
aggacctag
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