Nicrophorus vespilloides (burying beetle): 108566425
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Entry
108566425 CDS
T04922
Name
(RefSeq) chromodomain-helicase-DNA-binding protein Mi-2 homolog
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108566425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nvl03036
]
108566425
Chromosome and associated proteins [BR:
nvl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108566425
Chromatin remodeling factors
NuRD complex
108566425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
CHDNT
Helicase_C
DUF1087
PHD
Chromo
HDA2-3
ResIII
PHD_2
AAA_22
SSP160
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
108566425
NCBI-ProteinID:
XP_017781774
LinkDB
All DBs
Position
Unknown
AA seq
1950 aa
AA seq
DB search
MASEEELDESYAGDEDAVEEGATEQVENSPESDDNQLKVEEEDDDYEPEDGRKKKKGKKR
KARSEEKKGKKKKKKKKNDSGDESDFGEEENADSDYGSKKVRKSRGSTKHSAPATPVQET
AAASSAGGVSMPTIEEVCSTFSLTDVDLEYSESDYANLTTYKLFQQHVRPLLAKENPKVP
MTKLMMLVAAKWREFSTMNPHLQTEGAESSQAEPEYSKPTRTRVSKEPPKDEEEEEEDDD
DDDGKSKRKRASRASKKAAKKGKVPTLKIKFGKRKRGSSEDDGEGSANGSDRDSDMEFEQ
MLQEGYDGSSKTTSTTEETPSQPTTEAGEENPPVPRKKAKTKIGNKSKKKRKVKTTGKFP
DGEEQYEHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEDTPEGRWSCPHCENEGPAE
QDDDEHQEFCRACKDGGELLCCDSCPSAYHTHCLNPPLSEIPDGDWKCPRCSCQALFGKV
TKILTWKWVEIPNKEGEENKKPKRKREYFVKWHERSYWHSSWITELQLDVHHPLMFRNFM
RKYDMEEPPKLEEPLDESDSRHKRLQNMGQIKDEELEEKFYKYGVKPEWLIVHRVINHRT
MRDGRTLYLVKWRELPYDQATWEEENDDIPGLKLAMEYYTDLKAACLNEISKKGKKGKGK
KSKTRELIDDDDRITPRRYTPPPEKPTSDLKKKYDKQPEYFTETGMQLHPYQLEGLNWLR
YSWGNGTDTILADEMGLGKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFELWA
PDFYCITYVGDKDCRAVIRENEISFEEGSCSRGTKAGKVRASSIKFNVLLTSYELISIDA
ACLGSIDWAVLVVDEAHRLKSNQSKFFRLLAGYNISYKLLLTGTPLQNNLEELFHLLNFL
NSSKFNDLSTFQNEFADISKEDQVKKLHELLGPHMLRRLKADVLKNMPSKSEFIVRVELS
PMQKKYYKYILTRNYEALNPKGGGQSVSLLNIMMDLKKCCNHPYLFPVAAEEAPLGPHGN
YETQSLIKAAGKLVLLSKMLKILKGQGHRVLIFSQMTKMLDILEDYLEGEGYKYERIDGA
ITGSLRQEAIDRFNAPGAPQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR
AHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDIL
RFGTEELFKEDEGKEDEAIHYDEKAVSDLLDRSKEGIEQKENWANEYLSSFKVASYVTKE
GDTEEEVDTEIIKQEAENTDPAYWIKLLRHHYEQQQEDIARTLGKGKRVRKQVNYNDGGM
TTDTREDSTWQENLSDYNNSDFSAGSDEDKEDDDFDEKNEGDLNRRRGRSIRKDERDRPL
PPLLARVGGNIEVLGFNARQRKAFLNAIMRYGMPPQDAFNSQWLVRDLRGKSEKIFKAYV
SLFMRHLCEPGADNAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHINGEYSMPE
AVRKALEAKKEAKAAAEAAAAAAAAAAAAATAAANAAAASTATTTAATTVATSTPATTDD
NKSTTTSTTETPGTSATASPAPTAEPEKEKEEESKEEIVKDETKETKPEETEVPVKAEAE
VKETEEKPAETPTTEEIVDKKPEVEKVEPKEEPVKEEVDIKKEVKDDKKDDEDVIVVGEE
KKDKREEDEEAKRKFMFNIADGGFTELHTLWLNEEKAAAPGREYEIWHRRHDYWLLAGIV
THGYGRWQDIQADSRFTIINEPFKMDVGKGNFLEIKNKFLARRFKLLEQALVIEEQLRRA
AYLNLTQDPNHPAMSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLS
DMKSDVSRLPATLARIPPVAQRLQMSERSILSRLAATSSSSNQTTAQVMSQFPAGFNAGN
LPGFAAAAANFANFRPQYSVPGQPPSGFPS
NT seq
5853 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggaggaagaattggatgaatcgtacgccggagatgaagatgctgtggaagaa
ggtgcaacagagcaagttgaaaattcaccagaatccgatgataatcaactaaaagttgag
gaggaagatgatgattacgagcctgaagatggtagaaagaagaagaaaggcaagaagaga
aaagccagaagtgaagaaaagaagggcaaaaagaagaagaagaagaaaaagaatgacagt
ggagatgagagtgactttggtgaagaagagaacgccgattctgactacggtagcaagaaa
gtacgtaagtccagaggttctacgaaacactcggcaccagctactcctgtccaagagaca
gctgcagctagtagcgccggaggtgtcagtatgccgaccattgaagaggtgtgctccacc
tttagtttgaccgatgtcgatttagagtatagcgaatcagattacgctaacttgactacg
tataaattatttcaacaacatgtcagacctttattggctaaagaaaatcctaaggttcca
atgacaaagctgatgatgttggttgctgctaaatggagggaattctccactatgaatcct
catctgcaaactgaaggagcggaatctagtcaagctgaacccgaatattcgaaaccaaca
agaactcgagtttccaaggaaccgccaaaagatgaagaagaagaggaagaagatgatgac
gacgatgatggaaagagtaaacggaagcgagcgtctagggctagtaaaaaggcggcgaag
aaaggaaaagtacctacgctgaaaataaagttcggcaaaagaaaacgcggcagttctgaa
gatgatggtgaaggtagcgccaatggctctgatcgtgattcagatatggaattcgagcag
atgcttcaagaaggatacgatggttccagtaaaaccacaagcaccacagaagaaacgccc
tcgcagcccacaaccgaagcgggcgaggagaacccacctgttcctaggaaaaaagcgaaa
actaagattggaaacaagagcaagaaaaaacgaaaagtgaagaccaccggtaaattccct
gacggcgaggagcagtacgaacaccaagattactgcgaggtctgccagcaaggcggtgag
attattctgtgcgatacttgcccaagggcttaccatttggtttgcttggatcccgaactt
gaagatacgccagaaggcaggtggagttgcccgcattgcgaaaatgaaggaccagccgaa
caagatgatgatgagcatcaagaattttgcagagcttgtaaagatggtggtgaactgctt
tgttgcgattcatgtccttccgcttatcacacccattgtctgaatccaccgttatccgaa
attccagacggtgactggaaatgcccacgttgtagttgtcaagctttgttcggaaaagtt
acgaagattttgacatggaaatgggttgaaattcccaacaaagaaggtgaagaaaataag
aaacctaaaaggaagcgcgaatatttcgttaaatggcacgagcgttcttattggcatagc
agttggattactgagctccagctggacgtgcaccatcctttgatgttcagaaactttatg
cgtaaatacgatatggaagagcctcccaaattggaggagcctctagatgaaagtgacagc
cgtcacaaacgattgcagaacatgggacaaatcaaagacgaggaattggaagagaaattc
tacaaatacggagttaaacccgagtggcttatcgtgcatcgtgttattaatcacagaact
atgagagatggccgtactctttatttggtaaaatggagagaattgccttacgatcaagcg
acttgggaggaagagaacgatgatattcccggtttaaagttggccatggagtattatacg
gacttgaaagcagcttgcctgaatgaaatctcgaagaagggcaagaaaggtaaaggaaag
aagtctaaaacacgcgagttgattgatgacgatgataggattactcctagacgttacacg
ccaccaccagaaaaacccacaagtgatcttaaaaagaaatatgataaacaacctgaatat
ttcacagaaactggaatgcaactgcatccgtatcagttggagggcttaaattggttgcga
tattcttggggcaatggcactgacaccatcttagccgacgaaatgggtttgggaaaaact
attcaaaccatcacatttttgtattctttgtacaaagaaggtcattgcaaaggaccattc
ttagtcagtgtcccgttgtccacaatcatcaattgggagagagaattcgaactctgggct
cctgatttctactgtattacttacgtaggtgacaaagattgcagagccgtaatccgtgag
aacgaaatcagtttcgaagaaggttcttgcagtagaggaacgaaagcaggcaaagttcgt
gcgagttccatcaagtttaacgtattattaacaagttacgaattaatatcaatcgacgct
gcttgcttgggatccatcgattgggctgtattagtagtagacgaagctcacagattgaaa
agtaaccaatccaaattcttccgattacttgccggttacaatatttcctacaaattgctg
ctaacaggaacaccgcttcaaaacaacttggaggaattgttccacttgctgaatttcttg
aacagctccaaatttaacgatttgtcaactttccaaaatgaatttgcggatatttctaaa
gaagatcaagtgaagaagttgcacgaactgttgggtcctcacatgctgcgacgtttgaaa
gccgacgtattaaagaacatgccatcgaagtcagagtttattgtgagagtcgagctttcg
cctatgcaaaagaaatactacaaatatatattgacgagaaactatgaggcactgaatcca
aagggcggtggccaatcggtctcgttattgaacattatgatggacttgaagaaatgctgt
aaccatccatacctgttccctgtggctgcagaagaagcacctttgggaccacacggtaat
tacgagactcaaagtttgattaaggccgccggaaaattggtccttctgtcgaaaatgtta
aaaatattgaaaggtcaaggccacagagtgttgattttctcgcagatgacaaaaatgttg
gacattttagaagattatctagaaggcgaaggttacaagtacgaacgtatcgatggtgct
atcacaggttccctgagacaggaagctattgacagatttaatgcacctggagcacctcaa
ttcgtctttctgctatccactcgtgctggtggtttaggtatcaatttggctacagctgat
accgttattatttatgattctgattggaatccccataatgacatccaggcgttctcaaga
gctcacagaattggtcaagcgaacaaggtaatgatctatcgattcgtgacacgtaacagt
gtagaggaaagggttacacaagtggccaaaagaaaaatgatgttgactcatttggtcgtt
aggcctggaatgggcggcaaaggtgcaaatttcactaagcaggaattagatgacatttta
aggtttggtactgaagaactcttcaaagaagatgaaggtaaagaggacgaggcaatccac
tacgatgaaaaggctgtttcggatctgttagacagatccaaagagggtatagagcagaag
gagaactgggccaacgaatatctcagttcattcaaggtcgccagttacgtaacgaaggaa
ggtgatactgaagaagaagtcgacacagaaattattaaacaggaggcggagaatacggat
cctgcttattggataaaattgctcaggcatcactatgaacagcagcaggaggacattgcc
aggacgttaggcaaaggaaaacgtgtgaggaaacaagtcaattacaatgacggtggtatg
accacagatacacgagaggatagcacgtggcaagaaaatctgtctgactataataattca
gatttctctgccggttctgacgaggataaggaggatgatgatttcgatgaaaagaacgag
ggcgacttgaacagaagaagaggacgctctattcgcaaggatgagagagatcgtccgctg
ccgccgcttctggctagagtgggaggaaatatcgaagttctcggattcaatgctcggcaa
aggaaagctttccttaatgctattatgcgttacggtatgccaccgcaagatgcattcaat
tctcaatggcttgtgcgcgatttacgtggaaaatctgagaagatcttcaaagcttacgtc
tctcttttcatgagacatctttgtgaaccaggtgctgataatgccgaaacatttgctgat
ggtgtaccacgagaaggccttagccggcaacatgttttaacgagaattggtgttatgtca
ttgattcgcaagaaagttcaagaattcgaacacattaatggcgagtacagtatgccagag
gctgtacgcaaagctctggaagcgaagaaggaagctaaggctgcagcggaagcggcggct
gctgcggccgcggcagcagcagcggcggcgacggcagcagcaaatgctgctgctgcaagt
actgcgactactactgcagcaacaactgtagcgaccagtactcctgcaacgactgacgat
aataagagtacaacaacaagcactacagaaacacctggtactagcgcgactgcaagtcca
gcaccaacagcagaacccgagaaggaaaaagaagaggaatctaaggaagaaattgttaaa
gatgaaaccaaggaaactaaacccgaagaaactgaagtgccagttaaagcggaagccgag
gtgaaagaaactgaggaaaaaccagcggaaacgcctacgaccgaagaaattgtcgataag
aaacctgaggttgaaaaggtggaacctaaagaggagcctgttaaggaagaagtagatata
aagaaagaggttaaagacgacaaaaaagacgatgaagatgtaattgtcgtgggagaggag
aagaaagacaaacgggaagaggatgaagaagccaagaggaaattcatgttcaatattgct
gatggaggtttcaccgagttacacactctttggttaaatgaagagaaagcagctgccccg
ggccgcgagtatgaaatctggcacagacggcacgattattggttgcttgcaggtattgta
actcatggttacggacgttggcaagatattcaagcggattccagattcacgatcattaac
gaaccgtttaaaatggacgttggaaagggaaacttcctcgagatcaagaataagtttctc
gcaagacgtttcaagcttttggagcaggctctggtcattgaggagcagctcaggcgggct
gcttatttgaatctgactcaagacccgaatcatccagccatgtctctgaatgctcgtttc
gctgaggtcgaatgtttggccgaatctcaccaacatctaagtaaagaatctttggcggga
aacaaaccggcgaacgccgtcctccacaaagtattgaatcagctggaggagctgttatcc
gacatgaagtcggacgtttccagactaccagctacattggccaggatcccgccagtagct
caaagacttcagatgtcggaaagaagtattttgtcgcgactggcagccacatcgtcatcc
agcaatcaaacaactgcccaagtgatgagccagttcccagctggcttcaacgctggaaac
ttgccaggttttgcggccgctgctgctaacttcgccaacttccggccgcagtattcagtt
cctggccagccaccatccgggttcccctcctag
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integrated database retrieval system
