Neogale vison (American mink): 122897445
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Entry
122897445 CDS
T08764
Symbol
TAF1
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122897445 (TAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nvs01001
]
122897445 (TAF1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvs03021
]
122897445 (TAF1)
03036 Chromosome and associated proteins [BR:
nvs03036
]
122897445 (TAF1)
Enzymes [BR:
nvs01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
122897445 (TAF1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122897445 (TAF1)
Protein kinases [BR:
nvs01001
]
Serine/threonine kinases: Other
TAF1 family
122897445 (TAF1)
Transcription machinery [BR:
nvs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122897445 (TAF1)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
122897445 (TAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Opi1
Motif
Other DBs
NCBI-GeneID:
122897445
NCBI-ProteinID:
XP_044091624
LinkDB
All DBs
Position
X:complement(70622046..70694648)
Genome browser
AA seq
1934 aa
AA seq
DB search
MGPGWDLLLPAASGDTTTAIMSDTDSDEDSAGGGPFSLTGFLFGNINGAGQLEGESVLDD
ECKKHLAGLGALGLGSLITELTANEELTGTDGALVNDEGWIRSTEDAVDYSDINEVAEDE
SRRYQQTMGSLQPLCHSDYDEDDYDADCEDIDCKLMPPPPPPPGPTKKDKDEDALTGVSE
DGEGIILPSIIAPSSLASEKVDFSSSSDSESEMGPQEATQAESEDGKLTLPLAGIMQHDA
TKLLPSVTELFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKHRELIQEEQIQEVE
CSVESEVSQKSLWNYDYAPPPPPEQCLSDDEITMMAPVESKFSQSTGDTDKVADTKPRVA
EWRYGPARLWYDMLGVPEDGSGFDYGFKLRKMDLEPVMKCRMLEDFRKLEESSTDLLADE
NFLMVTQLHWEDDIIWDGEDVKHKGTKPQRASLAGWLPSSMTRNAMAYNVQQGFAATLDD
DKPWYSIFPIDNEELVYGRWEDNIIWDAQAMPRLLEPPVLTLDPNDENLILEIPDEKEEA
TSNSPSKESKKESSLKKSRILLGKTGVIKEEPQQNMSQPEVKDPWNLSNDEYYYPKQQGL
RGTFGGNIIQHSIPAVELRQPFFPTHMGPIKLRQFHRPPLKKYSFGALSQPGPHSVQPLL
KHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKI
KNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPET
DFLIIRTRQGYYIRELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKD
RPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMV
SPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIA
AMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRLSL
KNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQE
RYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSRE
REEQERKELQRMLLAAGSAASGNNHRDDDTASVTSLNSSATGRCLKIYRTFRDEEGKEYV
RCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEK
EKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQE
EELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGT
TVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKI
ITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEK
LKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDY
YKVIVSPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVC
YQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQKLSCTFVPQPPDLYD
TNTSLSMSRDASVFQDESSMSVLDIPAASPEKQVTQMHQGRGRLGEEDSDVDIEGYDDEE
EDGKPKTPAPEGEDADGDLADEEEGAVQQPQASVLYEDLLMSEGEDDEEDAGSDEEGDNP
FSAIQLSESGSDSDVGSSGIRPKQPRMLQENTRMGMENEESMMSYEGDGGEASHGLEDSN
ISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEEQRSGPSVLSQVHLSEDEEDSED
FHSIAGDSDLDSDE
NT seq
5805 nt
NT seq
+upstream
nt +downstream
nt
atgggaccaggctgggatttgctgctccccgcggcctccggtgacaccacaaccgccatc
atgtcagacacggacagcgatgaagattctgctggaggcggcccattttctttaaccggt
ttccttttcggcaacatcaatggagccggacagctggagggggaaagcgtcttggatgat
gagtgtaagaagcacttggcaggcttgggggctttgggtctgggcagcctgatcactgaa
ctcaccgcaaatgaagaattgactgggactgatggtgccctggtaaatgatgaaggatgg
atcaggagtacagaagatgctgtcgactattcagacatcaatgaggtagcagaagatgaa
agccgaagatatcagcagacaatggggagcttgcagccgctttgccattcagattatgat
gaagatgactatgatgctgactgtgaggacattgactgcaagttgatgccacctccacct
ccacctccaggaccaacgaagaaggataaggacgaggatgctcttaccggtgtgtctgag
gatggagaaggcatcatcttgccctccatcattgccccttcctctttggcctcagagaaa
gtggacttcagtagttcctctgactcagaatctgagatgggacctcaagaagcaacacag
gcagaatctgaagatgggaagctgaccctacctttggctgggattatgcagcacgatgcc
accaagctgttgccgagtgtcacagaattgttcccggaatttcggcctgggaaggtatta
cgcttcctacggctttttggaccagggaaaaacgtcccatctgtttggcggagtgctcgg
agaaagaggaaaaagaagcaccgtgagctgatccaggaagagcagatccaggaggtggag
tgctcggtagagtcagaagtcagccagaagtctttatggaactatgactacgctccaccg
ccacctccagagcaatgtctctctgatgatgaaattacgatgatggctcctgttgagtcc
aagttttcccagtcaactggagatacggataaagtggccgataccaaaccgagagtagcc
gagtggcgttacgggcctgctcggctgtggtatgatatgctgggtgtccctgaagatggc
agtgggtttgattatggcttcaaactgagaaaaatggacctcgaacccgtgatgaagtgt
agaatgttggaggatttcaggaaacttgaggaaagtagcactgaccttctggctgatgaa
aacttcctgatggtgacacagctgcattgggaggatgatatcatctgggacggagaggat
gtcaaacacaaaggaacaaaacctcagcgtgcaagcctggcaggctggcttccttccagc
atgactaggaatgccatggcctacaacgttcagcaaggttttgcagccaccctggatgat
gacaagccttggtactctatctttcccattgacaatgaggagctggtatatggacgctgg
gaggacaatatcatttgggatgctcaggccatgccccggctgttggagcctcctgttttg
acacttgatcccaatgatgagaacctcattttggaaattcctgatgaaaaggaagaggcc
acctccaactccccctctaaggaaagtaagaaggaatcgtctctgaagaagagtcgaatt
ctgttagggaaaacaggggtcatcaaggaagaaccacagcagaacatgtctcagccagaa
gtgaaagatccatggaatctttccaatgatgaatattactaccccaagcagcagggtctt
cgaggcacctttggaggaaatattattcagcactcgattcctgctgtggaattacgacag
cccttctttcctacccacatggggcccatcaaacttcggcagttccatcgcccacctctc
aagaaatactcttttggggcactctctcagccaggtccccactcagtccagcccttgcta
aaacacatcaaaaagaaggctaagatgagagaacaagagagacaagcctctggtggtgga
gagatgttttttatgcgcacacctcaggacctcacaggcaaagatggagatcttattctt
gcagaatacagtgaggaaaatggaccattaatgatgcaggttggcatggcaaccaagata
aaaaactactataagcggaaacctggaaaagatcctggagccccagattgtaaatatgga
gaaactgtttactgccatacatctcccttcctgggctctctccatcctggccagttactg
caggcatttgagaacaatctttttcgtgccccaatttaccttcataagatgccagaaact
gacttccttatcattcggacaagacaaggttactatattcgggaattagtggatattttt
gtggtcggccagcagtgccccctgtttgaagttcctgggcccaactccaaaagggctaat
acacatattcgagactttctccaggtctttatttaccgcctattctggaagagtaaagat
cggccacggcggatccgaatggaagatataaagaaagccttcccttctcactcagaaagt
agcatccggaagaggctgaagctctgcgctgacttcaaacgcacagggatggactcaaac
tggtgggtgttgaagtctgattttcggttaccgactgaagaggagatcagagctatggtg
tccccagagcagtgctgtgcctactatagcatgatagccgcagagcagcgactgaaggat
gctggctatggtgagaagtccttttttgctccagaagaagaaaatgaggaagatttccag
atgaagattgatgatgaggttcgtactgctccttggaacaccacaagggctttcattgct
gctatgaagggcaagtgtctcttggaggtgactggggtggcagatcctacagggtgtggc
gaaggattctcctatgtcaagattccaaacaaaccgacacagcagaaggatgataaagag
cctcagccagtaaagaagacagtgacaggaacagatgcagatctccgtcgcctttcactg
aaaaatgccaagcagctcctccgtaaatttggtgtgcctgaagaagagattaaaaagctg
tcccgctgggaagtgattgacgtagtccgcacgatgtccacagagcaggcccgctctgga
gaggggcccatgagtaaatttgcccgtgggtcaaggttttctgtggctgagcatcaggag
cgttacaaagaggaatgtcagcgcatctttgaccttcagaacaaagttttgtcatcaacc
gaagtattatcaactgacacagacagcagctcagctgaagacagtgactttgaagaaatg
ggaaagaacattgagaacatgttgcagaataagaaaaccagctctcagctgtcacgtgaa
cgggaggagcaggagcggaaggaattacagcggatgctactggcagcaggttcagcagca
tcaggaaacaatcacagagatgatgacacagcttctgtgactagccttaactcttctgcc
accggccgttgtctaaagatttatcgcacatttcgagatgaagaggggaaggagtacgtt
cgctgtgagacagtccgaaagccagctgtcattgatgcctacgtgcgcatacgaaccaca
aaagatgaggaattcattcgaaagtttgccctttttgatgaacagcatcgagaagagatg
agaaaggaacggcggaggattcaggagcaacttaggcggctgaagcggaaccaggaaaag
gagaagcttaagggtcctcctgagaagaagcccaaaaaaatgaaggagcgccctgaccta
aaactgaaatgtggggcttgtggtgccattgggcacatgaggacaaacaaattctgcccc
ctctactatcagacaaatgctccaccttccaaccctgttgccatgacagaggagcaggag
gaggagttggaaaagacagtcattcataatgataatgaagaacttatcaaggttgaaggg
accaagattgtcctggggaaacagctaatagagagtgcggatgaggttcgcagaaaatct
ctggttctgaagttccctaaacagcagcttcctcccaagaagaaacggcgagttggaacc
actgttcactgtgactacttaaacagacctcataagtccatccaccggcgccggacagac
ccaatggtgacattgtcctccattttggagtctatcatcaatgacatgagagatcttcca
aatacctaccctttccatactccagtcaatgcaaaggttgtaaaggactactacaaaatc
atcactcgaccaatggacttacaaacccttcgtgaaaatgtgcgcaaacgcctctacccc
tctcgggaagagttcagagagcatttggagctaatcgtgaaaaatagtgcaacctataat
ggtccaaagcactcactgacccagatctctcaatccatgctggatctgtgtgatgaaaaa
ctcaaagagaaagaagataaattggctcgtttagagaaagctattaacccgttgctggat
gatgatgaccaagtagcattttctttcatcctggacaacattgtcacccagaaaatgatg
gcagttccagattcttggccatttcatcacccagttaataagaagtttgttccagattat
tacaaagtgatcgtcagtccaatggatttagagactatacgtaagaatatctccaagcac
aagtaccagagtcgggagagctttctagatgatgtcaaccttattttggccaacagtgtt
aagtataatgggcctgaaagtcagtatactaagactgctcaggagattgtaaatgtctgt
taccagacactgactgagtatgatgagcatttgactcaacttgagaaggatatttgtaca
gctaaggaagcagctttggaggaagcagaattagaaagcttggacccaatgactccaggg
ccttacacacctcagaagctaagttgtacatttgtgccacagcctcctgatttgtatgac
accaacacgtccctcagtatgtctcgagatgcctctgtatttcaagatgagagcagtatg
tctgtcctggatattcccgctgcctctccagagaagcaggtgacgcagatgcaccagggc
cgaggtaggctgggcgaggaagactctgatgtagatattgaagggtatgatgatgaggag
gaggatgggaaacctaagactccagccccagaaggcgaagatgcagatggcgatcttgcc
gatgaagaggaaggagccgtgcagcagcctcaagccagtgtcctatacgaagacttgctt
atgtctgaaggagaagatgatgaggaagatgctgggagtgacgaagaaggagacaatcct
ttctctgctatccagctgagtgaaagtggaagcgactccgatgtgggatccagtgggata
agacccaaacagccccgtatgcttcaggagaacacaaggatgggcatggaaaatgaagaa
agcatgatgtcctatgagggagacggtggggaggcttctcatggtttggaggacagcaac
atcagttatgggagctatgaggagcctgatcccaagtcgaacacccaagacacaagcttc
agcagcatcggtgggtatgaggtatcagaggaggaagaagatgaggaggaagagcagcgc
tctggccccagcgtactaagccaggtccacctgtcagaggacgaggaggacagtgaggat
ttccactccattgctggggacagtgacttggactctgatgaatga
DBGET
integrated database retrieval system
