Neogale vison (American mink): 122909096
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Entry
122909096 CDS
T08764
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122909096 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122909096 (CNOT10)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122909096 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
ARM_TT21_N
TPR_19
ARM_TT21
TPR_12
TPR_16
TPR_8
TPR_MalT
TPR_7
TPR_17
RdRP_head
DUF6058
Motif
Other DBs
NCBI-GeneID:
122909096
NCBI-ProteinID:
XP_044108693
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Position
6:161245448..161323759
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AA seq
743 aa
AA seq
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MAADKPADQGAEKHEGTSQSSGITDQEKELSTSAFQAFTAGNYDACLQHLACLQEVNKDD
YKIILNTAVAEFFKNNQTTTDSLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVIL
YHLRQYTEAIAVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTYQAEKALHLLAVLEKMIS
QGSNNKNGKNETGNNTNKDGSNHKAESGALIEAAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLG
CIHFAMSKHNLGIFYFKKALQENDNVCAQLSAGSTDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKGTAEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNTVYNDGQSSAIPVASMEFAAICLRNALLLLPEEQQDPK
QENGSKNSNQLGGNTESSESSETCSSKSHDGDKFIPAPPSSPLRKQELENLKCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESTGKRAPQCYPSSVTSARTVMLFNLGSAYCLRSEYD
KARKCLHQAASMIHPKEVPPEAILLAVYLELQNGNTQLALQIIKRNQLLPAVKTLSEMRK
KPVFQPVHPIQPIQMPAFTAQRK
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacaagcctgcagatcagggagcagagaaacatgaagggacaagtcagtcc
tctgggatcactgatcaagagaaggagttgtccaccagtgctttccaagctttcacagct
ggaaattacgatgcctgtctgcaacaccttgcttgcctacaagaagtaaacaaagatgat
tataaaataattttgaatacagcagtggctgagttttttaaaaataatcaaacgacaaca
gatagtttgagacaaacgcttaaccagctgaagaatcaggtccactcagctgttgaagaa
atggatggattagatgatgtggagaacagcatgttgtattataatcaggcagtcattctt
tatcatctgcggcagtacacagaagcgatagcagttggtgaaaagctttaccagttcata
gaaccttttgaagaaaaatttgcccaagcagtgtgttttttgcttgtagacctatatata
ttaacctatcaagctgagaaagctttgcatcttcttgctgtcctagaaaaaatgatttca
caaggcagcaacaacaaaaatgggaagaatgagactggtaataacaccaacaaagacgga
tcgaatcataaagctgaaagtggagccctaatagaagctgcaaaatcaaagatacatcag
tataaagtaagagcttatatccaaatgaagtccctgaaagcatgcaaaagggaaatcaag
tcagtcatgaacacagctggaaattctgcgccctctctgtttcttaaaagcaattttgag
tacttaagaggcaattatcggaaagctgtgaagctattaaatagttcaaacattgctgaa
catccaggattcatgaaaacaggtgaatgcttgagatgcatgttctggaataatcttggt
tgcatccattttgccatgagcaagcacaatttgggaattttctactttaaaaaggctcta
caggagaatgacaatgtttgtgcacagctcagtgcagggagcactgatccaggcaagaaa
ttttcgggaagacccatgtgtacattgctaaccaacaagaggtatgagttgctatataac
tgtggcattcagcttcttcacattggaagacctcttgctgcatttgagtgtctgattgaa
gctgttcaggtttatcatgcaaatccccgcctctggctaaggctggctgaatgctgcatt
gctgcaaataaggggactgctgaacaagaaactaaaggccttccgagtaagaaaggaatt
gtacagtctattgttggtcaaggctatcatcgtaaaatagttctggcatcacagtccata
cagaatactgtatataatgatggacagtcttcagccattcctgtagccagtatggagttt
gcagccatttgtctcagaaatgccttgttgctcttacccgaagaacagcaagatccaaag
caggaaaatgggtctaaaaatagtaatcaattaggtgggaacacggaaagcagtgaaagc
agtgaaacttgcagcagtaaaagccatgacggagataaattcattccagctccaccttct
tcgccattgagaaaacaagaattagaaaacttaaaatgctccatacttgcctgtagtgct
tacgtggctctggctctgggtgataaccttatggctttgaatcacgcagataaacttctt
cagcagcccaagctgtcaggatcgcttaagtttttgggccatttatatgctgcagaagcc
ctcatctctctggacagaatatctgatgccattactcacttgaacccagagaatgtcact
gatgtttccttagggatttcttcaaatgagcaggaccaaggatcagacaaaggtgaaaat
gaagcaatggaatccactgggaagcgggcccctcagtgctaccccagttcggtcacctct
gccaggacggtgatgctgtttaatcttggcagcgcctactgcttgaggagcgaatacgac
aaagcccggaagtgtctccaccaggcggcttcgatgatacatcctaaagaggtgccccct
gaagccatcttactggcagtctaccttgaactgcaaaatggtaatacccagctggcctta
cagatcatcaaaaggaatcagctgctccctgcagtgaaaacactgtctgagatgagaaag
aagccagtgttccagcctgtacacccgatccagcccatccaaatgccagctttcactgcc
cagagaaagtga
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