Neogale vison (American mink): 122919079
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Entry
122919079 CDS
T08764
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122919079 (SH3TC1)
Membrane trafficking [BR:
nvs04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
122919079 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
SH3_1
TPR_NPHP3
SH3_2
TPR_2
SH3_9
TPR_1
Csd3_N
Motif
Other DBs
NCBI-GeneID:
122919079
NCBI-ProteinID:
XP_044123795
UniProt:
A0A8C7AKH5
LinkDB
All DBs
Position
11:65769199..65816902
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AA seq
1335 aa
AA seq
DB search
MEGPVEEPAPEGRGPTAAPLGGSGGGGHKVPRVAMSASVVWEHAGPEEAKAVVGGDATPP
PGGSGPAAGTPPVQMGTYPTDLTLQLLAVRRKTGLLDPSLQQTVRNRLRLLENDSREVAR
ALGELSARLLSIHSDQARIVVTFKTFEEIWKFSTYHALGFTHHCLENLLVDQAFWLLSPS
EDEETAVRVHVDQEALTRTHESLLAQEGPFFVLCPDHRVRVKTSPQGAGSGPQALRRASR
VLQGEAVPAMDPSAPGSGTSSENMAAAAAPETLIPFHQWALRVPWDPIDDSVSGPVTSDI
PLMATGLATVVADYQGSGPEEMTFCSGDVIEVLGAQVPGLPWCLGRHTASGQVGFVRTSL
ISVQGQVSDLENVIFLNEEERSFFSSEGRFSEEDARQLLRRVSGVDVCTVYSLDRLEEAE
FEQLGDQEMPLPGLHPDPCETLQKVKNVLEQCKSGQGCPEEPVSWGLCMASSGTGSPHSE
DPAFCLDSGADWAHPEVLGSLLLFLDAPGYEACFRGLYDLSLPGLSTLFPGFTDEEELAE
HLAQARGVAKKAGFPMALARLCFLLGRLCVRRLKLSQARVYFEEALGALGGHFGDLFLVV
AVYANLATVHLKQKNKDRCAQVVPKALALLVGTPSHLCSSEAESPLLRLALRRAILCHSP
QAEARACFLLAKHHTRLKQLEEALPFLERLLLLHGAMGAPEAAWPVDCYLLLADIYSRQC
LPHLALGCVRGASLRARGSPGSALRSVDLVLRNSPRLHRPPAQTALYLRQALASVAPSPS
WALHGLLCASLAQLHSRHGQQATAISFMMQAVDVAMGAGSHLAVDYIVALAWLYVLCGQS
VVALDILESVLDMAVASVDQEGVIANMVAVALRRTGRIRQAAEGYYRALRVARARSQLQN
QAVVLANFGALCLQAGAESLAQHYHRESVTLFARLPSRECGPDLTWVLLRLGHLYTRRAL
ARQAKCCYEWAFLVAVETDHVEGQLRAVQRLCHFYRTVMPREAQCVVYHEFQLSLARRVA
DKVLEGQLLETISQLYLSLGTERAYKSALDYTKRSLGIFIDLQRKEKEAHAWLQAGKIYY
ILQQNELVDLYIQVAQNAALYTGDPNLGLELFEAAGDIFFNGTWEREKAVSFYRDRALPL
AVTTGNQEAELRLCNKLVALLPELELPHEGLEFAHMALALSITRGDRLNERVAYHRLAVL
HQRLGHGELAEHFYLKALSLCGSPLQFDEETLYYVKVYLVLGDILFYELKDPFDAAGYYQ
LALAAAVDLGNKKAQMKIYTRLAIIYHNFLLDREKSLFFYQKARTFATELNVRRVNLAPA
RCWGRAPWLVTGPPP
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atggagggcccagtggaggagccagccccggaggggagagggcccacggcagcacccttg
ggaggcagcggtggtggtggccacaaggtcccgagagtggccatgagcgcatcggtcgtc
tgggagcacgcagggcccgaggaggccaaggctgtggtcggaggtgatgccactcctccc
cctggtggctccgggccggctgctgggacccctccagtccagatgggtacctaccccaca
gacctgaccttgcagctactggccgtgcggaggaagacggggttgctggaccccagtctg
cagcagaccgtgaggaaccggctccgcctgctggaaaatgacagccgggaggtggcccgt
gcactgggggagttgtcagccaggctgctatctatccacagtgaccaggcacggatcgtg
gtgacctttaagactttcgaggaaatctggaagttctccacctaccacgctcttggcttc
actcatcactgcctagaaaatctgctcgtggaccaggccttctggctgctctcgcctagt
gaggacgaggagacagctgtccgcgtccacgtggaccaggaggccttgacacggacgcat
gagagcctcctcgcccaggaaggtcctttcttcgtcttgtgtcctgaccaccgtgtgcgg
gtgaagaccagcccccagggtgcagggagcggcccccaggcactcaggcgagcctctagg
gttctccagggagaggcagtcccggcaatggacccttctgctcctggctccggcacgtcc
tctgagaacatggcagcagcagccgctccagaaactttgattccatttcatcaatgggct
cttagggtcccctgggaccccatcgacgactctgtgagtggacctgtgacatcagatatc
ccactgatggccacaggcctggccacagtggtggcagactaccagggctccgggcctgaa
gaaatgaccttctgcagcggcgacgtcatcgaggtcctgggtgcccaggtgcctggcctg
ccctggtgcctgggccggcacacggcctcaggccaggttgggtttgtgcggacgagtctc
atcagtgtgcagggccaagtatctgatctggaaaatgtgatttttctgaatgaggaagaa
aggtcattcttcagcagtgaagggcgcttttctgaggaagacgccaggcagctactgagg
agggtttctggtgtggacgtctgcacagtgtacagcttggacagattagaagaagccgag
tttgaacagctgggagatcaagaaatgcctctgcctggcctgcatccagatccatgtgag
accctccagaaggtgaagaatgttctagaacaatgcaagtccggccagggctgccccgag
gagccagtgtcctggggtctgtgcatggcgtccagtggtacaggctccccgcacagtgag
gatcccgccttctgcttggactcgggggctgactgggcccacccagaggtgctgggctca
ctgctgctgttcttggacgcgcctgggtatgaggcctgcttccgtggcctatatgacctc
tccctgccggggctgagcaccctgttcccgggcttcaccgacgaggaggagctggctgag
cacctggcacaggcccggggggtggccaagaaggccggcttccccatggctctggccagg
ctctgcttcctcctggggaggctgtgcgtgcgcaggctcaagctgtcccaggcccgcgta
tacttcgaggaggccctgggggcgctgggtggccactttggcgatctcttcctcgtggtg
gccgtgtatgccaacctagccaccgtccatctgaaacagaagaacaaggacaggtgtgcc
caggtggtccccaaggccttggccttgctcgtggggacgcccagccacctgtgcagctcc
gaggcagagtcgccgctcctaaggctcgccctgcggcgggccatcctctgccacagcccc
caggccgaggcccgggcctgcttcctgctggccaagcaccacacccgcctcaagcagctg
gaggaggccctgcccttcctcgagaggctgctactgctgcatggggccatgggcgctcca
gaggccgcatggcccgtggactgctacctgctcctggcagacatttacagccgccagtgc
ctgccgcacctggcactcggctgcgtccggggggcctcgctgcgggcccggggctcaccg
ggcagcgcactccggagtgtggacctcgtcctccgaaactcaccccggctgcaccggcca
cccgcccagacggcactctacctcaggcaggcgctggcctccgtggcccccagcccgagc
tgggcactgcatggcctgctctgtgccagtctggcccagctgcacagtcgccacgggcag
caggccacagccatctccttcatgatgcaggccgtggacgtggccatgggggccggcagc
cacctggctgtggactatatagtggcgctggcctggctgtacgtgctttgtggccagagc
gtggtggccctggacatccttgagtccgtcctggacatggccgtggccagcgtggaccag
gagggcgtgatcgctaacatggtggccgtggccctgcggaggacaggcaggatccggcag
gcggctgagggttactaccgtgccctgcgggtggcccgggcccggagccagctgcagaac
caggcggtggtcctagccaacttcggggccctgtgcctgcaggctggcgcggagagcctg
gcccagcactaccaccgggaatctgtgacgctgtttgcgcggctgcccagcagagagtgc
ggcccggacctcacctgggtgcttctgcggctgggccacctgtacacccgccgggccctc
gcccggcaggccaagtgctgctacgagtgggccttcctggtcgctgtggagacggaccac
gtggagggccagctgcgagccgtccagcggctatgtcatttctataggaccgtcatgccc
agagaggcccagtgtgtcgtctaccacgagttccagctttcgctggcccgcagggtggcc
gacaaggtgctggagggccagctcctggagaccatcagccagctctacctgtcgctgggc
actgagcgggcctacaagtccgcgctggactacaccaagcgcagtctggggatcttcatc
gacctgcagaggaaggaaaaggaggcgcacgcctggctgcaggcagggaagatctactac
atcctccagcagaacgagctggtggacctctacatccaggtggcacagaatgcggccctg
tacacgggggaccccaacctggggctggagctgtttgaggcagctggggacatcttcttc
aatgggacctgggagcgggagaaagccgtgtccttctaccgggatcgggcgctaccgctg
gccgtgaccacggggaaccaggaggcggaactgcggctctgcaacaagctggtggccctg
ctgcctgagctggagttgccccatgagggcctggagtttgcccacatggccctggcgctc
agcatcacccggggggaccggctgaacgagcgtgtggcctaccaccggctggctgtcctg
caccagcggctgggccacggcgagctggcggagcacttctacctcaaggcgctgtcactg
tgcggctcacccctgcagttcgatgaggaaaccctgtactacgtgaaggtgtatctggtg
cttggtgacatcctcttctacgaactgaaggaccccttcgatgcagccgggtactaccag
ctggcgctggcagcagctgtggacctgggcaacaagaaggcccagatgaagatctacacg
cgcctggccatcatctaccacaactttctgctggaccgagagaagtccctcttcttctac
cagaaggccaggacctttgccactgagctcaatgtccgcagagtcaacctggccccagcg
cggtgttgggggcgggcaccctggctggtcactggccccccaccctga
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