Nocardia vulneris: V7968_34400
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Entry
V7968_34400 CDS
T10816
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
nvu Nocardia vulneris
Brite
KEGG Orthology (KO) [BR:
nvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nvu03051
]
V7968_34400 (pafA)
Enzymes [BR:
nvu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
V7968_34400 (pafA)
Proteasome [BR:
nvu03051
]
Prokaryotic proteasome
Bacterial regulatory particles
V7968_34400 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
WWW17980
LinkDB
All DBs
Position
complement(7661130..7662488)
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AA seq
452 aa
AA seq
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MQRRIMGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATAECDSLHQLVTHDRAGERVLEELLIDAEQRLAEEGIGGDIYLFKNNTDSAGNSY
GCHENFLVVRAGEFSRISDVLLPFLVTRQLICGAGKILQTPKAATFCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMAETTTMLKVGTAALVLEMIEAGVSF
RDFALDNPIRAIREVSHDLTGRRPVRLAGGRQASALDIQREYYARAVEHLRNRDRDPQID
QVVDLWGRTLDAVEAQDFAKVDTEIDWVIKRKLFQRYQDRYSMELSDPKIAQLDLAYHDI
KRGRGVFDLLQRKGLAKRITEDEAVDAAVDTPPQTTRAKLRGDFITAAQEAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVDRLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgacgaatcatggggatcgagaccgagttcggtgtgacatgcaccttccacggt
caccgtcggctgtcccccgacgaggtggcccggtatcttttccgccgggtggtgtcctgg
ggccgtagctcgaacgtgttcctccgcaacggtgctcggctctacttggatgtcgggtcc
catccggagtacgcgactgccgaatgcgacagcctgcaccaattggtgacccacgaccga
gcaggcgagcgggtcctcgaagagttgttgatcgatgccgagcagcggctcgccgaagaa
ggcatcggcggcgacatctacttgttcaagaacaacaccgattccgcgggcaactcctac
ggctgccacgagaacttcctcgtggtgcgggccggcgagttctccaggatctccgatgtg
ctgctgccgttcctggtcacccgccagttgatctgcggcgcgggcaagatcctgcagacg
ccgaaggcggccaccttctgtctgtcgcagcgggccgagcacatctgggagggcgtctcc
tcggcgaccacccgatcgcggccgatcatcaacacccgcgacgagccgcacgcggacgcg
gagaaataccgccgcctgcacgtcatcgtgggcgattcgaacatggccgagaccaccacc
atgctcaaggtcggcaccgccgccctggtgctggagatgatcgaggcgggcgtctcgttc
cgggacttcgcgctggacaacccgattcgcgcgatccgggaggtcagccacgacctgacc
ggtcgtcgtccggtgcgcctggcgggcggccggcaggccagcgccctcgacatccagcgc
gagtactacgcccgcgcggtcgagcatctgcgcaaccgggaccgggatccgcagatcgac
caggtcgtcgacctgtggggccgcaccctggacgcggtcgaggcgcaggacttcgccaag
gtggacaccgagatcgactgggtgatcaagcgcaagctgttccagcgctaccaggatcgc
tacagcatggagctgtccgatccgaagatcgcccagctggacctggcctaccacgacatc
aagcgcggccgcggcgtgttcgacctgctgcagcgcaaggggctggccaagcggatcacc
gaggacgaggccgtggacgccgcggtcgacaccccgccgcagaccacccgggccaagctg
cgcggcgatttcatcaccgcggcgcaggaggcagggcgcgacttcaccgtcgactgggtg
cacctcaagttgaacgaccaggcgcagcgcacggtcctgtgcaaggatccgttccgctcg
gtcgacgaacgcgtggaccggctgatcgcctccatgtag
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