Neisseria weaveri: SAMEA3174300_2035
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Entry
SAMEA3174300_2035 CDS
T04355
Symbol
exoA
Name
(GenBank) exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
nwe
Neisseria weaveri
Pathway
nwe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nwe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA3174300_2035 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwe03400
]
SAMEA3174300_2035 (exoA)
Enzymes [BR:
nwe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SAMEA3174300_2035 (exoA)
DNA repair and recombination proteins [BR:
nwe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SAMEA3174300_2035 (exoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
SAY52092
LinkDB
All DBs
Position
1:2164168..2164944
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AA seq
258 aa
AA seq
DB search
MLKIISANVNGIRSAYKKGFHEYIAASGADIVCVQELKAQEPDLSDDMKNPHGMYGVWHC
AEKRGYSGVAIYSKQRPDNVQIGMGIEEFDSEGRFVRADFGKLSVISLYLPSGTSAPERQ
ELKYRFLDAFYPMLAEMKAEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEERAWIG
KVIADLGWVDMWRKLYPEVPGYTWWSNRGQAYAKDVGWRIDYHMVTPELAAKAVEAHVYK
EEKFSDHAPLVVEYDYSI
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaatcatctccgccaatgtgaacggcatccgttccgcttataaaaaaggcttc
cacgaatacatcgccgcgtcgggcgccgacatcgtttgcgtgcaggaattgaaagcgcaa
gagccggatttgtcggacgatatgaaaaatccgcacggtatgtatggcgtatggcattgc
gccgaaaaacgcggttacagcggcgtggcgatatacagcaagcaacgccccgacaatgtg
caaatcggcatgggcattgaagaattcgacagcgaaggccgttttgtgcgtgccgatttc
ggcaaattgagcgtgatttcgctttatctgcccagcggcaccagcgcgccggagcggcag
gaattgaaataccgctttttggatgcgttttaccccatgttggccgagatgaaagcggaa
ggccgcgatatcgtggtgtgcggcgattggaacatcgcccatcaaaacatcgacttgaaa
aactggaaaggcaatcagaaaaattcgggctttctgccggaagaacgcgcatggataggc
aaagtgattgccgacttgggctgggtggatatgtggcgcaaactgtatcccgaagtgccc
ggctacacttggtggagcaaccgcgggcaggcgtatgcgaaggatgtggggtggcgtatc
gactaccacatggtcacgcccgagctggcggctaaagcggtggaagcgcatgtgtataaa
gaagaaaaattttccgaccatgcgccgctggtggtggaatacgattattcgatctga
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