Nematolebias whitei (Rio pearlfish): 119407947
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Entry
119407947 CDS
T08042
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119407947 (lingo3a)
Membrane trafficking [BR:
nwh04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
119407947 (lingo3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_9
LRR_RPS2
LRRNT
Cupin_1
V-set
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
119407947
NCBI-ProteinID:
XP_037530708
LinkDB
All DBs
Position
3:28796985..28851405
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AA seq
608 aa
AA seq
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MGVSLGQEVSWPFLFLLLMITMSSIQSQGCPQRCECMAKLKAVSCNGKRLSALPDGISLD
TKVLDLSGNKLRWIEHGDLLPYTRLEKLDLSDNMISVLEPNAFASLQNLHSLSLRGNQLK
LVPMGAFSRLSNLTSLDLSENKIVILLDFTFQDLKSLKNLEVGDNDLVYISNKAFLGLVG
LRELTIERCNLTSVSSQSLSYLHNLETLRLRYLSIITLEDQNFRKLGNLRGLEIDHWPFL
EYISPHSLQGLNLSWLSITHTNITSVPTSALRSLAYLTSLNLSYNPISVLESWALRDLLR
LKELHLVNTNLARVQPYALGGLRQIRLLNFSTNSLVTLEDGAFQSVNTLETLRLDGNPLA
CDCRLLWILQRRKTLNFDNAPPVCMTPVEVQGRALSAFSDSALFDHFTCQKPKIRNRKLQ
QISAREGQVVSFICRAEGEPTPAIFWISPQRRRITTKSSGRLIVLPEGTLEIRYAQVTDS
GTYICIASNAGGNDTYFATLTVSGLPLDAALMSNRTYYAGDLNDTNLNDTRVFLKFTLDL
KTILISTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPATSGGQGGA
RKFNMKMI
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgggggttagcctgggacaggaagtaagctggcctttcctgttcttgctgctcatgatc
acaatgtcttccatccaaagccaaggatgccctcagcgttgtgagtgcatggccaagctg
aaggccgtgtcctgtaatggaaaacgtctttctgcactgccagatggaatctcactagac
accaaggtcttggacctaagtgggaataaactgcgctggatagagcatggcgacctgctt
ccatatacacgtctggagaagctggacctaagcgataacatgatcagtgtcctggagccc
aatgcttttgctagtcttcagaacttgcattcactttcactgaggggtaaccagctaaag
ctggtccccatgggggctttctcacgtctctccaacctaacttcactggacctaagtgaa
aataaaattgtaattcttttagacttcactttccaagacctaaagagtctaaagaacttg
gaggttggagacaatgatctggtttacatatcaaataaagcctttcttggtttagtggga
ctccgagagctgacaattgaaaggtgcaacctgacttcagtgtccagccagtcattgtcc
tacctgcataacctcgagactcttcggctccgctacctcagtattatcaccttggaggat
cagaatttcagaaagctgggaaacctgaggggtctggagattgatcactggccctttctt
gaatatatctctccccacagcttgcagggtcttaatttgtcttggttgtctatcacacac
accaacatcacctctgtgcccacctctgccctccgcagtctggcttacctcacctccctc
aacctgtcctacaaccctatctctgtgctggagtcctgggctctgcgggacctcctcagg
ctcaaagagctgcatctagtcaatactaaccttgctagagtacagccttacgcacttggt
ggtctcaggcaaattcgcctacttaatttttcgacaaacagcttggtgaccctggaggat
ggagcctttcagtctgtcaacactctggagacgctgcgtttggatggaaaccccctggcc
tgtgactgccgcttgctctggattcttcagcgcaggaagactcttaactttgacaatgcc
cctccagtgtgtatgacacccgttgaggtgcaaggacgggctcttagcgcgttttctgac
tcggctctctttgatcacttcacctgccagaagcccaaaatacgcaacaggaagttgcag
caaatatctgcccgagaaggccaagtagtctcattcatctgcagagcagaaggtgaacca
acccctgccattttctggatttctccacagcgccgccgcataaccacaaaaagtagcggc
cgacttattgtgttaccagaaggcacgctggaaatacggtatgcccaagtaacagacagt
ggaacatacatctgcatagccagcaacgctggtggaaatgacacctactttgctaccctc
acagtaagtgggctgcctctagacgcagccctcatgtccaaccgtacgtattatgctggg
gaccttaatgacacaaatctgaacgataccagagttttcttgaagtttactcttgacctg
aagaccatcctcatatcgacagcgatgggctgcatcatgtttctgggagtggtcctgttc
tgtttcattctgctctttgtgtggagtcgagggagagggcagcacaagaacaatttctcc
gtagagtattcttttagaaaagtggatggacccgcaaccagtgggggacaaggaggagca
cgcaagttcaacatgaaaatgatctga
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