Nematolebias whitei (Rio pearlfish): 119415713
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Entry
119415713 CDS
T08042
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
119415713
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nwh02000
]
119415713
Transporters [BR:
nwh02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
119415713
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
119415713
NCBI-ProteinID:
XP_037538804
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Position
10:25103528..25123092
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AA seq
545 aa
AA seq
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MAVDVPGLVSVVVFYICILAIGVWGSRKSRKVEKKCTGTKSEISIIGGRNINVLVGVFTM
TATWVGGGYIMGTAEAVYSPSQGLIWALGLPAYAANFLLGGLFFAKPMRSKCYVTMLDPF
QNRYGKAFTATLLLPALVSDILWVACILSALGGTMSIILRLSSTVSIIISAAVSIVYTFL
GGLYSVAYTDIIQLCFIFVSLWLCVPFLVLSPAVSIISHTPALNQSYESSWVGHLELMDA
GKWVDELLLLALGGLSYQALYQRVLSAASSTQAQITCYAAAVTVFIMGIPSVVIGVVAAS
ADWNQTDYGFPPPFERGDAGKILPLALQNLTPTWVGVLGIGSVAAAVMSSMDSALLSSAS
MFTQNIYKTIVRKQASERELQWVIRISVLLVGLAGTGLAFGGDSVLAFWILSGDLTYVVI
FPQLVCVLHFRHVNCYGAISGFVTGLLLRGLSGEPVLGIPAVLRYPGWREENSVIVQYFP
YRTVAMFASLLSIIIVSCLVDQIFHHQLIPQSWDFLKVFKKKNEPEEEEMPDASEEMKCA
LTTKF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggatgtccctggactggtgtccgtggtggttttttatatttgtatcctggcc
attggagtgtggggttctcgaaaatccaggaaggtggagaagaaatgcactggcaccaag
agcgaaatttccatcattggtggtcgcaacatcaatgtcctggttggggtttttaccatg
acagccacatgggtcggtggaggttacattatgggaactgctgaggctgtttattctcca
tctcaaggtctcatctgggctttaggcctcccggcatacgctgcaaattttctcctgggt
ggattgttttttgcaaaacctatgaggtcaaagtgttacgtgaccatgttggacccattt
cagaaccgctatggcaaagcattcactgcaacactcctgcttccggctttggtcagtgac
atattatgggttgcctgcatcctttctgctctgggtggaacaatgagcatcattctcagg
ctgtcatccactgtctctatcatcatctcagccgctgtctccatcgtctacacgttttta
ggaggcctgtactctgtggcatatactgatattatccagctttgttttatttttgtcagt
ctgtggctttgtgttccctttctggtgctaagtcctgcagtctccattatctcacacaca
cctgccctcaaccagtcttatgaaagctcctgggtaggacacttggagctgatggatgca
ggaaaatgggttgatgaacttctgctcctggctttaggtggattgtcatatcaagctttg
taccaacgagttctttcagcagcctcttcaacgcaggctcagatcacctgctatgctgct
gctgtcaccgttttcatcatgggaatcccctcagtggtcattggagtcgtggctgcctct
gcagactggaaccagacagactatggttttccgcctccctttgaacgtggagatgcaggg
aagatcctgccacttgctctgcagaacctcacccccacctgggtcggagtgttggggatc
ggttctgttgctgctgctgttatgtcctccatggactcagccttgctgtcatcagcttcc
atgtttacacaaaacatatacaagacaattgtcaggaagcaggcctcggagagggagctc
cagtgggtgatccggattagcgtgctgctcgtgggcctggcagggaccggtttggcgttt
ggcggtgatagtgttctagctttttggattttaagcggagatctcacctacgttgtgatt
ttcccacagctggtctgcgtgctgcacttccggcatgtgaattgttacggggccattagt
ggctttgtgacaggtttgttgctgcgagggctgagcggggaaccagtactcgggatccca
gctgtgctccgataccctggttggagagaggagaacagcgttatcgtgcaatactttcct
tacaggacggtagccatgttcgcttctttattaagcatcatcatcgtctcctgcctggtg
gaccagatctttcatcaccagctaatccctcagtcctgggatttcctgaaggtgtttaag
aagaaaaacgaaccagaggaggaggaaatgccagacgcaagtgaggagatgaagtgtgct
ctcactacgaaattctaa
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