Nematolebias whitei (Rio pearlfish): 119416007
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Entry
119416007 CDS
T08042
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04620
Toll-like receptor signaling pathway
nwh04621
NOD-like receptor signaling pathway
nwh04622
RIG-I-like receptor signaling pathway
nwh04623
Cytosolic DNA-sensing pathway
nwh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119416007 (irf7)
04621 NOD-like receptor signaling pathway
119416007 (irf7)
04622 RIG-I-like receptor signaling pathway
119416007 (irf7)
04623 Cytosolic DNA-sensing pathway
119416007 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119416007 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119416007 (irf7)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
119416007 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
119416007
NCBI-ProteinID:
XP_037539104
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All DBs
Position
10:17481486..17487855
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AA seq
438 aa
AA seq
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MQSPSKPQFARWLIEQVETGQYEGLRYVDQNKIRVPWKHNSRKDCNDEDSKIFRAWAVVS
GKITEFPNDKARWKTNFRCVLNNLGARFKLIKDNSKNLDDPHKIYEIINTEYNYENLPTQ
NSQEDLDMTSDIYSPSTEFLPLLNKHNLLNDLMALDLGTQPAEEQLWVETCVHHGPAVFG
SYPAAAENIPQFLPDQPIYSEVNPAPVLSPPQQLGLYDLEISIHYRKKEMLKTTLQTNRL
QLHYHSEAPEFNAHHLCFPSTEGLLDHKQTEYTNRILSSIQRGLLLVVHEHGIYATRHDK
CHVFASTSDPSVAHPNAQKLPTNTTVELLSFEKFVNELKQFKENNGSSPEYTINMCFGEK
FPDGKPLEKKLIVVKVVPLICRSLHDMAQTEGASSLHSTNISLQISHNSLFDLINSVFAL
PGAEEPPQLTTAPSFAHM
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcccgtccaaacctcagtttgcccgctggctcatcgagcaggtggagacgggt
cagtacgagggtctgcgctacgtggaccagaacaagatccgagtcccctggaagcacaac
tccaggaaggactgcaacgacgaggacagcaagatattccgggcctgggcagtggtgagc
ggaaaaataacagagttcccaaacgacaaggcgaggtggaaaaccaacttccgttgtgtg
ctcaacaacctcggcgcgcgcttcaagttgataaaagataattccaagaatctagacgac
cctcataagatctatgagatcatcaacaccgagtacaattatgaaaatctgccgacgcag
aactctcaggaggatttggacatgacttcagatatctacagtccttccactgagtttctc
cccttactgaacaagcacaatctgcttaatgatttaatggctttggatcttggcacccaa
ccagcagaggagcagctgtgggtggagacctgtgtccaccatggtcctgctgtttttgga
agctaccctgctgcagcagagaacatccctcagtttttaccagaccagccaatctacagt
gaggtaaatcctgccccagtcctcagtccacctcagcagctaggtctgtatgatttggag
atttccatccactaccgaaaaaaggaaatgctgaagacaacgctgcaaaccaaccgtctt
caactccactaccacagcgaggccccggagttcaacgcccatcatctctgcttcccttcc
accgagggtctgctggaccataaacagactgaatacaccaaccgcatcctcagcagcatc
cagcgtggtctgttactggtggtgcacgaacatggtatatatgctacgcgacacgacaaa
tgccatgtttttgcaagcaccagtgaccccagtgtggctcaccccaacgcccagaaatta
cccacaaacaccacggtggagcttctcagttttgaaaaatttgttaatgagcttaaacag
ttcaaggaaaacaatggcagctctcctgaatacacaatcaacatgtgctttggagaaaag
tttcctgatggaaaaccgttagaaaagaagctcatcgttgtgaaggtggtacctctaatc
tgcagatcccttcatgacatggcccaaacggagggggcttcttcacttcacagcaccaac
atcagccttcagatttcacacaacagcctctttgacctcatcaactctgtgttcgctctc
ccaggagctgaagagccaccacagctgacgaccgcgccttcctttgctcacatgtga
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