Nematolebias whitei (Rio pearlfish): 119418423
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Entry
119418423 CDS
T08042
Symbol
dse
Name
(RefSeq) dermatan-sulfate epimerase
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
nwh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
119418423 (dse)
Enzymes [BR:
nwh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
119418423 (dse)
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Gene cluster
GFIT
Motif
Pfam:
DUF4962
CobN-Mg_chel
Motif
Other DBs
NCBI-GeneID:
119418423
NCBI-ProteinID:
XP_037541631
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All DBs
Position
12:4374947..4491276
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AA seq
956 aa
AA seq
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MRTHTRGAPTVFFISFLWTLLTPASAAGPDPSGGIPFMGGNYDSHPMLYFGREDVEELQY
AAAGTHQNMAQKIREAAETMLEHPEEYLPPWNPVEFSARWNEIYGNNLGVLAMFCLLYPH
RAGALDLTKDYMERMASQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYEYLNKDQQERFL
QVIGNTSRLMYEKSYIRGWGFQYLHNHQPTNCVALLTGSLIYMTQGYLQEAYLWTKQVLS
IMEKSIVLLQDVTDGSLYEGVAYGTYTTRSLFQYMFLVQRHFSIGHFAHSWLLHHFSFLY
RTILPGFQKTVAIADSNYNWFYGPESQLVFLDRYVLRNGSGNWLAAQIHQNRVTEGPGQA
GKGQRWCTLHTEFIWYDPGLMPKPPPDFGTSQLHHFEDWGVVTYGSALPADTNNSFLSFK
SGKLGGRAIFDTVHKSKYKEWIKGWRNFNAGHEHPDQNTFTFAPNGVPFITEALYGPKYT
LLNNAVLFGAALPGSCFEPWVGQVTEACDSKWLKYKVGLAADAQGQIEAALKRDNMVFIR
GEAHSAYNPALKIRNFQRNLLLLHPQLLVLVDHIHLDSDSPARAMSAFFHNTELPFQSTK
VDGVYGAFATHRGDKYKMFWMDDTNSSNKGRVGYWTYPRGYAYNGSNYVNVTMPLRYPHT
RVAYILFGPDIDVQSFSLRGDDQRVDVYLATKDHTYTIYLLTGEVPSKPLFAMVLLDHKK
IVFERAAAVVERSPEEVEEYVNVMEDNLQHVKPVFQQMERHILGRVLNTATFRKTAERLL
QFSDKKKTEEVIEKMFAMSKKQNKGKGGKRMNLREKLSESLPDIFAQIELNEKKERQRTS
KQTYEDSPEEGDADSQAFVDYTDSHKNRKGAFIKGRRFKEVHMVATARSERVSTTASYIR
LFLLLNTAAFFLLLAMLLTRFQRSPSLHTQRCFYSILLIDCFILLFLYSSCSHTQC
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgaggacccacactcgtggggcccccacagtcttcttcataagttttctgtggaccctg
ctcactccagcatcagcagcaggaccagaccccagtggaggaatccccttcatgggaggt
aactatgacagtcacccaatgctgtactttggccgggaagacgtagaggagctgcagtat
gccgcggcagggacccaccaaaacatggcccagaagatcagggaggctgcggagaccatg
ctggagcacccggaggaatacttgcctccctggaatcctgtagagttcagcgctcgctgg
aacgagatctacggaaacaatctgggcgtgctggccatgttctgcctgctgtacccacac
agagctggggccctggacctgaccaaagactacatggagaggatggcgtcccagcctagt
tggttggtgaaagatgccccctgggatgaggttccgttggcccattctttggttgggttt
gccacagcttatgacttcctgtatgaatacttgaacaaagaccaacaggagcgtttcctg
caggtgatcggtaacacttcccgcctgatgtatgagaagtcctacatccgaggatggggc
ttccagtacctgcacaaccatcagcccaccaactgtgtagccttgctcacaggaagtctg
atttacatgactcaaggttacctccaggaggcctacctgtggaccaagcaggtgctgtcc
atcatggagaaatccattgtccttctacaggatgtgacggatggctcgttgtatgagggt
gtggcctatgggacctacaccacccgctccctgttccagtacatgttcctggtgcagcga
cacttctccatcggacacttcgcccactcctggctgctccatcacttctccttcctgtac
agaaccatcctgcctggatttcagaagactgtagccattgcagactccaactacaactgg
ttctatggacctgagagccagctggtcttcttggaccgctatgtgttgcgaaacggcagt
gggaactggctggcagctcagattcatcagaacagagttacagaagggccgggacaggct
ggcaaaggccagagatggtgcactctgcacacagagtttatctggtatgacccaggattg
atgcccaaacccccaccagatttcgggacttctcagcttcaccactttgaggactggggt
gtggtcacttatggtagtgctttgcctgcagacactaacaactcctttctgtccttcaag
tctggcaaactggggggacgtgccatctttgatacagttcacaagagtaagtacaaagag
tggatcaaaggctggaggaactttaatgctggtcatgagcaccctgatcagaacacgttc
acctttgcacccaacggtgtcccgttcatcacagaggcgctgtacggacccaagtacact
ttgttgaacaacgcagtgctgtttggtgctgccctcccagggagctgctttgagccatgg
gttggacaggtcacagaggcctgcgactccaagtggctgaagtacaaagtgggtcttgct
gcagatgctcagggccaaatagaagctgctctgaagagagacaatatggtattcattcga
ggtgaggcacattctgcttataatccggcactgaagatcaggaacttccagaggaaccta
ctccttcttcacccacagctcctggttctggtggaccacatccatctggattcggacagc
cctgccagggccatgagtgccttctttcacaacacagagttgccattccaaagcacaaag
gtagatggtgtttatggggcgtttgcaactcataggggagataaatataagatgttctgg
atggacgacacaaactccagcaataaagggagggtgggttactggacttaccctcgagga
tacgcctacaatggctctaactatgtgaatgtcacaatgccactgaggtaccctcacaca
agggtggcctacattttgtttggaccagacatagatgtacagagcttcagcttacgtggg
gacgatcagagggtggatgtttaccttgccaccaaggaccacacctacaccatctacctg
ctgaccggagaagtccccagcaagcctttgtttgctatggtgctgctggaccacaagaag
attgtgtttgagagggcagctgctgtggtggaaagatcacccgaggaggtagaagaatat
gtcaatgtgatggaggacaatctccagcatgtgaagcctgtgttccagcagatggagagg
cacatcctgggacgggtcctcaacactgccacctttcgtaagactgcagaacgtctcctc
cagttttcggacaaaaagaagacagaggaggtcattgagaaaatgtttgctatgtctaag
aaacagaacaagggtaaaggagggaagaggatgaacctcagagagaagctttctgaaagt
ctgcctgacatttttgcacagattgagttaaatgagaagaaggagagacagaggacatca
aagcagacatatgaggacagtccagaggaaggagatgcagattcacaagcctttgtggat
tatacagatagtcacaagaaccggaagggagcttttatcaagggccgcagatttaaggaa
gttcacatggtggccacagcgaggagtgaaagggtctccactacggcttcctacatcaga
ctgttccttctcttgaacactgccgcattcttcttactgctggctatgctgctcactcgc
tttcagagaagtccaagtttgcacactcagagatgtttctacagcatccttctcattgat
tgtttcatcctgctgttcctctactcctcctgctcccacacacagtgctga
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