Nematolebias whitei (Rio pearlfish): 119421116
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Entry
119421116 CDS
T08042
Symbol
grin2aa
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04020
Calcium signaling pathway
nwh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119421116 (grin2aa)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119421116 (grin2aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119421116 (grin2aa)
Ion channels [BR:
nwh04040
]
Ligand-gated channels
Glutamate (ionotropic)
119421116 (grin2aa)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
119421116
NCBI-ProteinID:
XP_037544439
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All DBs
Position
15:complement(25257719..25526283)
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AA seq
1483 aa
AA seq
DB search
MTSPAVAQKQRTSGGSEKVPVLNIAVILGRTRYISDRDIRALWSKEDPIDVNVVTLLVNE
TDPKSIITHMCDLMSGTKIHGVVFGDGTDQEAIAQILDFISSQTLIPILGINGGSSMIMA
DKDVKSTFFQFGASIQQEALLMLNIMEEYDWHVFSIVTSKFPGYQEFINILKTTVDNSFV
GWDLQNIITLDAVEEDSRSQIMLKKVQSPVVLLYCSKDEAVYILEEARSLGLTGFGYIWI
VPSLTTGNTEITPESFPSGMISVSYDEWDYPLEARVRDGLGIITSAAAAMLYEYGDIPEA
KTSCYGQMEKTSKLPPSALHKYMMNVTWDGRDLSFTEDGYQENPKLVVIVLNKEREWEKM
GKLDNGSLTVKYPVWPRFNSFGDAELDDNHLSIVTLEEKPFVIVEDVERLTGTCMRNSVP
CRKHIKDNTTEAGGTYIKKCCKGFCIDILKKIAKYVKFTYDLYLVTNGKHGKKINNVWNG
MVGEVVYKKAVMAVGSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSA
SVWVMMFVMLLLVTAMAVFMFEYISPLGFNRNLAQGKDPHGPSFTMGKAVWLLWGLVFNN
SVPVQNPKGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDNKFQNPYA
YSPPFRFGTVPNGSTERNIKKNYPAMHQYMVKYHQTGVVDALVSLKSGKLDAFIYDAAVL
NYMAGRDEGCKLVTIGSGYIFATTGYGIALQKGSYWKRQVDLAILAIIGDGEMEELEAQW
LTGICHNEKNEVMSSQLDVDNMAGVFYMLATAMGLSLITFVSEHLFYWRLRYCFTGVCSG
RPGLLFSISRGIWSCIHGVHIDMKKKTDLDFSPQDKMLKLIKSAKQMTNMSNLGGSHLNS
PKREFMHSAGPMIMDMMAEKGNFIYTDNRSYAPKDMIYGDTGDLQSYLANRHKDHLNNYI
FQGGQHPLTLNDANPNTVEVSVSPDTVQTNAKPLRTLWKKSGDTLRSMPPGPPPMPDMLM
PDPRISMKTQRYLPEDTAHSDISDCSSRAASYKDPENNKHLKPKDNLKKRSVSGGTNQSG
RGGGVGEKIYTIDSDRELSLHSDPIHFRESHTLAADDVDYPEIYSDHSDNYRKCEQPIIH
LNSSPLHHPDSDLLSDSAYSKHYNLKEKNLSLSPHETIDRYKQTHCRSCLSKVTASYPPA
GSYGSTGSATASGTRSPYNRCEACLHTANLYDISEDQLLADSLISPTMHHPEQQSDEMFG
LYWPQTDGPHVQKRNRLRLSRQHSFDNIMLEKPKDLDMGRPARSVSLKEKDRFLDSASDS
HYANLFGMRPYSGKLFGTGSKSMLFNHNLEESKRSKSLYPAHGSENPFLSHSLRDDTSSR
LVHGRSSSDIYKQLAVGSPVVAVGAAPIKTRNDANNLRSSGKSSSSYCSRDGRIANDMYN
KEHVMPYSANKTSAYPASRGVLNSAQFSNRRVYKKIPSLESDV
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atgacgagccctgcggtggcgcaaaagcagaggaccagtggtggttcagaaaaagtgccg
gtactgaacatcgcggtgatcctgggacgcacgcgctacatctctgaccgggacatccgg
gctctttggagcaaagaggaccctattgacgtcaatgtggtcacactgctggtcaacgaa
acggacccaaaaagcatcatcacccacatgtgcgacttgatgtcgggtaccaagatccac
ggcgtggtattcggggacggcactgaccaggaggccattgcccagattttggattttatt
tcctcgcagacgctcatacccatcttgggcattaatggagggtcgtctatgatcatggct
gacaaggatgtgaagtccacatttttccagtttggtgcctccatccagcaggaggcttta
ctaatgctgaacatcatggaggagtatgactggcacgtcttctccattgtcacatccaag
ttccccggctaccaggagttcatcaacatcctaaaaactactgttgacaacagttttgtg
ggctgggacctccagaacatcatcacacttgatgctgtggaagaggacagtcggtctcag
atcatgctcaagaaggtccagtctccagtggtcttgctctactgttctaaagacgaagca
gtctacatcctggaggaggctcgctctctgggcctgactgggtttggttacatttggatt
gtgccgtcacttactactgggaacacggaaataacaccagagtcgtttccatcagggatg
atttcagtgtcgtacgacgagtgggactacccgctggaggcacgagttcgagatggactg
gggatcataacgtcagcagcagcagccatgttgtatgagtatggagatatccctgaagcc
aagacatcctgctatggccaaatggaaaagacaagcaagctgccgccaagtgctctgcac
aagtacatgatgaacgttacatgggatggcagagacttgtcgttcacagaggacggctac
caggaaaacccaaagctggttgtcattgtcctcaacaaggaaagagagtgggaaaagatg
gggaaactggacaacggcagcctcacggtgaagtatccagtgtggccacgtttcaactcc
ttcggtgatgctgagctcgatgacaaccacctgtccatcgtcaccttagaagagaaacca
tttgtcattgtggaggatgtagagagactcaccggtacctgcatgaggaactctgtgcct
tgcaggaagcatatcaaagacaacacaactgaggccggagggacatatatcaaaaagtgt
tgcaaaggtttttgcattgacattctgaagaaaattgctaagtatgtcaagttcacctat
gacctttacttggttactaatggcaaacatggcaagaagatcaacaacgtctggaatggg
atggtgggagaggtggtttataagaaggccgtcatggcggtggggtctctgaccatcaac
gaggagcgttccgaggtcatcgatttctcggtcccatttgtagaaactgggatcagcgtc
atggtctcacgcagcaacgggaccgtctctccatcagctttccttgagccattcagcgcg
tcagtgtgggtgatgatgtttgtgatgctcctgctggtgactgcaatggccgtcttcatg
tttgagtacatcagtcctcttggctttaacagaaacctggcacagggaaaagatccacac
ggaccttctttcactatgggcaaggcagtgtggcttctctggggtctggtatttaacaac
tctgtccccgtgcaaaacccaaaaggaaccaccagcaagttcatcgtgtcggtgtgggcc
ttcttcgctgtcatcttcctggcctcctacactgccaatctggctgccttcatgattcag
gaggagtttgtcgaccaagttactggactctcagacaacaagtttcagaacccgtacgca
tactctcctccatttcgctttgggacagtaccaaatggttctacagagagaaatatcaag
aagaactaccctgccatgcaccagtacatggtgaagtatcatcaaactggagttgtggat
gcacttgtcagccttaaatcaggcaagctggatgccttcatctatgatgcagcagtgtta
aactacatggctggcagggatgagggatgcaagctggtcaccatcggcagcgggtacata
tttgcaaccactggttatggcattgctctgcaaaaaggttcctattggaagcggcaggtg
gatcttgccatcctagcaatcatcggagatggtgaaatggaggaactggaagctcagtgg
ctgacaggaatttgccacaatgagaaaaatgaagttatgtcaagtcagctggatgtggac
aacatggcgggggtcttctacatgcttgccacagccatggggctttcacttatcaccttt
gtctcagagcatctcttctactggaggctcagatattgcttcacgggggtctgctctggc
aggcctggacttcttttcagcatcagcaggggaatctggagctgcatccatggagttcac
attgacatgaagaaaaagactgatcttgatttcagccctcaggacaaaatgcttaagctc
attaagtctgccaagcagatgacaaatatgtctaacctgggcggctctcacttgaattca
cctaaacgagaatttatgcactcagctggccccatgatcatggacatgatggcagagaag
ggcaacttcatatacactgacaacagaagctatgctcccaaagatatgatatatggggac
actggtgatcttcaatcttatcttgccaatcgtcacaaagaccacttaaacaactacatt
tttcaaggggggcagcaccctttgacgttaaatgatgccaatccaaatacagtggaggta
tctgtgagtcctgacacagtccagaccaatgccaaaccactgcggacgttgtggaagaaa
tcaggagacactcttcgctctatgccccctggtcctcctccaatgcctgatatgctaatg
ccagacccaagaatatcaatgaaaacccagcgctaccttcccgaggacacagcccactct
gacatctctgactgttcaagcagagcagcttcctacaaggacccagaaaacaacaagcac
ctgaaacccaaggacaacttaaaaaaaagatctgtcagtggtggaaccaaccaaagtggg
aggggaggaggagtaggggagaaaatctacactattgactcagacagagagctaagtctt
cattcagatcccattcacttccgtgaaagtcacactcttgctgcagatgatgtggattat
cctgaaatttactcggatcacagtgataactacaggaagtgtgaacagcccatcattcat
ctgaactcttcacctttgcatcacccggactcagatcttctgtcagattcagcttactct
aaacactacaacttgaaagagaaaaatctttccctgtcccctcatgaaactattgatcgc
tataaacagacacattgtcgttcctgcttgtccaaagtgacagctagctacccaccagca
ggatcatatggctccactggatctgccacggcatctgggactcgttccccatataatcgg
tgtgaggcatgcctccacacagccaatctgtatgacattagtgaggaccagcttcttgct
gactccttgatcagtcccaccatgcaccatccagagcagcagtcagatgaaatgtttggt
ctgtattggcctcagacagatggaccacatgttcaaaagagaaaccgcttgaggttgagt
cgtcagcactcattcgacaacatcatgcttgaaaagcccaaggatcttgacatgggtcgg
ccagcacgtagtgtcagtctcaaagagaaggatcgcttcttggactctgcatctgactcg
cactatgcgaacctttttggcatgcgtccctactctggcaaactttttggcactggatct
aaatcaatgctgtttaaccacaacctggaggaaagcaaaaggagcaagtccctgtaccca
gcacatggctcagaaaacccttttcttagccattcgttgagggatgataccagcagcaga
ctggtccatgggcgtagctcttctgacatttacaaacagttggcggtaggttctcctgtg
gtggctgtaggagcagctccgatcaaaacacgtaatgatgcgaacaatctccgctcttcc
ggtaaatccagctcttcatactgttcaagggatgggcggatagctaatgacatgtacaat
aaagagcatgtgatgccttactcagccaataagactagtgcatacccagcctcacggggt
gtcctaaactcagcccagtttagcaatagacgggtgtataagaaaatccccagtctggag
tcagatgtttag
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