Nematolebias whitei (Rio pearlfish): 119424688
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Entry
119424688 CDS
T08042
Symbol
cercam
Name
(RefSeq) procollagen galactosyltransferase 2 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh00310
Lysine degradation
nwh00514
Other types of O-glycan biosynthesis
nwh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119424688 (cercam)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
119424688 (cercam)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nwh01003
]
119424688 (cercam)
Enzymes [BR:
nwh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
119424688 (cercam)
Glycosyltransferases [BR:
nwh01003
]
O-Glycan biosynthesis
O-linked Gal type
119424688 (cercam)
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Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
119424688
NCBI-ProteinID:
XP_037548108
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Position
18:31220246..31231608
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AA seq
589 aa
AA seq
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MLLPVLLSAALLFRAECYFSEEKYPEESKMQPPTVVLAIIARNAAHSLPYFLGALERLSY
PKDRISVWAATDHNSDNTTAILKEWLTVMQKYYHYVEWRPMDKPTSYAGELGPKHWPSSR
YEYVMKLKQAALNFSRKRWADYILFADTDNILTNPDTLSLLIAENKSVIAPMLDSQGAYS
NFWCGITPQGYYRRTAEYFPTRYRHRLGCFPVPMVHSTLLLDLRKEGMKNLAFYPPHDDY
SWPYDDIIVFAFSCRAAAIQMYLCNKERYGYLNVPAKPHQTLEDDRLNFVHVHLESIIDG
PRMYPSRFVHMFPKQRDLMGFDEIFLINLRRRSDRRDRMLFSLNELEIDVKVVDAVDGNA
LNSSDIKFLGVDLLPGYYDPFSGRTLTKGEVGCFLSHYYIWKEIVDMEMDKALIFEDDVR
FEANFKRRALRLMEEVELVDLDWDLIYFGRKQVNPGKEKPLENVQNLVEADYSYWTLSYA
ISQQGAQKLLNAEPLSKMLPVDEFLPIMYDKHPNKDYKSHFPNRNLQAFSTRPLLVQPCH
YAGDAQWVSDTETSTLWDDDSVRTDWRGSHKTLKGSAPEMLSAAYRDEL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgttgctccccgttttactgtcggcggcgctgcttttccgggctgagtgttacttttcg
gaggagaagtatccggaggagtcgaaaatgcagcctcccaccgtggttctcgccatcata
gcccggaacgccgctcactcgctgccatacttcctcggagctctggagcggctcagctac
cccaaagaccgcatctctgtgtgggcagccacagatcacaactctgacaacaccacagcc
atactgaaggagtggctgactgtcatgcagaaatattaccattacgttgagtggaggccg
atggacaagcccacgtcttatgcaggagagctgggtcctaaacactggcccagcagcaga
tacgagtatgtgatgaagctcaaacaggcagcgctgaacttttccaggaaacgctgggct
gactacatcctgtttgctgacacagacaatatcctcaccaacccagacaccctcagcctg
ctcatagcagaaaacaagtccgtcatcgcccccatgttggactctcagggagcgtactcc
aacttctggtgtggcatcactccacagggttattatcgccgaacagcagagtacttcccc
acacggtaccgtcacagactgggctgcttccccgtcccgatggtccacagcaccctgctg
ctggatttaaggaaggagggcatgaagaatctggctttctaccctccccatgacgactac
tcatggccttacgatgacatcatcgtgtttgccttctcctgccgcgctgctgcgatccaa
atgtacctgtgcaacaaggagcgctacggctacctgaacgttcccgccaaacctcaccaa
acactggaggacgatcgcctcaactttgtccacgtccatcttgagtcgattatcgatggt
ccacgcatgtatccttctcgattcgtccacatgttcccaaaacagagagacctgatggga
tttgacgagatatttctgattaatctgcggcgccggtcggaccgaagagacaggatgttg
ttctctttgaatgagctggagattgacgtcaaagtggtggatgctgtggatggaaacgca
ctgaacagcagcgacattaaattcttgggtgtggacctgctgccgggttactacgacccg
ttctccggtcgcactctcaccaaaggggaggtgggttgcttcctcagccactactacatc
tggaaagagatcgtggacatggagatggacaaagccctgatctttgaggacgatgttcgc
ttcgaggccaacttcaagcgacgagcgctcaggctgatggaggaagtggagctggtggac
ttggattgggacctcatatactttggcaggaagcaggtgaatcctggaaaggagaagccc
ctggagaacgttcagaacctggtggaggctgactactcgtattggactctgtcctacgcc
atctcgcagcagggagcccaaaaactgctcaacgccgagccgctgtccaagatgctgcct
gtggatgaattcctccccatcatgtatgacaaacatcccaacaaggactacaagtcccat
ttcccaaacagaaacttacaagccttcagtacacgcccccttctggtgcagccatgtcac
tacgccggtgacgctcagtgggtgagcgacaccgagacgtccacgctgtgggacgacgac
tcggtaaggaccgactggaggggctcccacaagaccctgaaagggtccgcgcccgagatg
ctgtcggctgcgtacagggacgaactttag
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