Nematolebias whitei (Rio pearlfish): 119425738
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Entry
119425738 CDS
T08042
Symbol
rfx5
Name
(RefSeq) DNA-binding protein RFX5
KO
K08061
regulatory factor X 5
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119425738 (rfx5)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Other basic domains
RF-X
119425738 (rfx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
119425738
NCBI-ProteinID:
XP_037549210
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All DBs
Position
19:33027848..33038640
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AA seq
699 aa
AA seq
DB search
MSEDQHHQRAEASQRAKGGLEAGEGDTEPSLLLQKLKSNISKNVQTKVDQILQDVQRFSD
NDKLYLYLQLPSGPSCGDKSGGDASSFNTADQLHTCNWIRSHLEEHSDTCLPKQDVYETY
KRYCDNLQHRPLSAANFGKIIRDIFPNIKARRLGGRGQSKYCYSGIRRKTVLNMPLLPNL
DLKNDPSELTELVQTYKQEVTEAACELICDWAQKILKRSFDTVVEIARYLIQEHIVNPRC
SQADLVTSAALAGGPAKTHKVIKKAPVLSKPDGDESSDQRKEQGDSSSSSSSSSQKLPSG
DKSAAAAKPSTADAPPPSSTSSSSLRPAVEAFMKQLPRILPRSSVPDKSLSVRASLPSQA
PKEASGVGGPSGHGGSADLHPTASSGGVKVIAMATLPQQQGGPVPVMFLPQSCLSFERDK
VAPPPPLPLQQQQHAVAAPTSVVQKARGTATKRPLEGETSGGGAAGVSGASAVSTSPVKR
KRGRPRKPRPEDSLPAPPVTLPPQPPPPPPSQQPIITSLTGGVIQKASSSSSSSSQPVVE
LVIQEPSGLVLSQLPAMSDPAHRLLEHRGVVVQCQTGGTAELDHHSRPLLVFQSPGNPGW
ELASPGRTQMVEVIQKAPRPSNNSTAPPHAAQLHLPPLPLPKLQEDQGEVEITLMPVDLN
VSSPPSSTAPASSCSLSSAMVVKLEDEEEGNGISNRKGL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggaccagcaccaccagcgggccgaagcctcccagcgggcaaagggcggtctg
gaagcaggagagggcgacacagagcccagcctgctgctgcagaaactaaagagcaacatc
tctaagaatgttcagaccaaagtggatcagatcctgcaagacgttcaacgtttctctgac
aacgacaagctgtacctgtacctccagctgccctcggggcccagctgtggagacaaaagt
ggtggtgacgccagttcgttcaacacagccgaccagcttcacacctgtaactggatccgc
agccacctggaggagcattcagacacttgtctgcccaaacaggatgtctacgagacgtac
aagagatactgtgacaacctgcagcatcgtcctctgagcgctgccaattttgggaagatc
atccgagacatttttccaaacatcaaggcgagacgactcgggggcagaggacaatccaaa
tactgttacagcggcatcaggaggaagaccgtcctcaacatgcctcttctgcccaacctg
gacctgaagaacgacccgtcggagctgactgagctggtccagacctacaaacaggaagtg
acggaggcggcgtgcgagctgatctgcgattgggcgcagaagatcttgaagcgttccttc
gacacggtggtggagatcgcccgctacctgatccaggagcacattgtgaaccctcgctgc
agccaggccgatctggtgacctctgctgccctcgcaggtggtccagctaaaacgcacaag
gtcatcaagaaagctcctgtgctctccaaacctgatggagacgaatcctcagatcagagg
aaggaacagggagactcgtcttcatcctcgtcctcgtcctctcagaagcttccgtctgga
gacaagtcagcagcagcagccaaaccttccacagcagatgccccgcctccttcctctacc
tcttcttcatctctgcgaccagcggtggaggcgttcatgaagcagttacccagaatcctc
cctcgcagctccgtccctgataagagcctctctgtccgcgcctctctgccctcgcaggct
cccaaagaagcctctggtgttggggggccttctggacacgggggctctgctgaccttcac
cccactgccagcagtggtggggtgaaggtcatcgccatggcaacgctgccccagcagcag
ggcgggcctgtccctgtgatgttccttcctcagagctgtctgtcgtttgagagggacaag
gtcgctccacctcctcctcttcctcttcagcagcagcagcacgcagtggcagcccccacc
tcggtggtccaaaaagcacgagggaccgccaccaagcgcccgctggagggagagacatca
ggcggcggtgctgctggtgtgtctggtgcctcagctgtcagcacgtctccagtgaaacgg
aaacgtggacgaccaagaaaacctcggcctgaggactcacttcctgctcctcctgtcact
cttcctcctcagcctccccctcctcctccctctcaacaaccaatcattacctccctgact
ggcggcgtcatccagaaggcttcttcctcttcgtcatcctcctcgcagcctgtggtggag
ctggtgatccaggaaccatcaggtttggttctgagccagctgccggccatgtcagacccc
gcccatcggctgttggagcaccgcggcgtggtggtgcagtgtcagacaggtgggacggct
gagttggaccatcacagcaggccgctcctggtgttccagagtcctgggaacccaggctgg
gagctggcctcgccgggacggacccagatggtagaggtgatccagaaagctccgaggccg
agcaacaacagtacagctcctccacatgcagcgcagctccacctgcctcctcttcctctg
cccaaactgcaggaggatcaaggcgaggtggagatcacgctgatgccagtagatctgaat
gtcagctcgcctccttcctcgactgctcctgcctcctcctgctctctttcctccgcgatg
gtggtgaaactagaggatgaggaggaaggaaacggcatctcaaacagaaaaggactttag
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