Nematolebias whitei (Rio pearlfish): 119425796
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Entry
119425796 CDS
T08042
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03250
Viral life cycle - HIV-1
nwh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119425796
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119425796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119425796
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nwh04147
]
119425796
Membrane trafficking [BR:
nwh04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
119425796
Exosome [BR:
nwh04147
]
Exosomal proteins
Proteins found in most exosomes
119425796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
AAT
JIP_LZII
Csm2_III-A
Motif
Other DBs
NCBI-GeneID:
119425796
NCBI-ProteinID:
XP_037549271
LinkDB
All DBs
Position
19:complement(23838871..23854642)
Genome browser
AA seq
880 aa
AA seq
DB search
MATFISVPLKKSSEVELVKPLSKFVTASYPAGEEQTEYLRAVEELNKLRKNALGRPLDKH
ESSLEILLRYYDQLCAIEPKFPFSENQLCLTFTWKDAFDKGSLFGGSVKLSLASLGYEKT
CVLFNCAALASQIAAEQNIDNDECLKAAAKYYQLASGAFSHIKDTVLSALNREPTMDICP
ETVSTLSSIMLAQAQEVFFLKATSDKMKDAVIAKLANQAADFYGEAFKQCQFKDTLPKYF
YFQEVLPVLAAKHCIMQANAELHQSILAKQKKRFGEEIARLQHAAELVKTVASRYDEYVS
VKDLTDKINRALTAAKKDNDFIYHDRVPEVKDLEHIGKAALVKSSTITPPLSQKFTDLFE
KMVPMAVQQSMSFYSQRKAETVNRLVGTMREATNLCNGVLASLNLPAALEDLSGDSIPQS
IAEKAKSIVGQGGLQSIEKLIKDLPELLTRNREILDESLKMLDDEETTDNELRAKFNQRW
NRTPSGDLYKPLRAEGTNFRNILDKAVGADQVVRDRYNTQCDMIALLCKPESELTAAIPS
ANPTKTLQGSEVVNVLRSLLAQLDEVKKEREVLEGEIKAVTFDMSTTFLKALAQDGAINE
EQLSMSQLDQLYGSYNQKVQASLSMQEELLGQVQTSHQEFASLKQSNSDANQREEVLKKL
ASAHDSYVEICSNLREGTKFYNDLTEILLKFQNKCSDIVFARKTERDELLKELQQSIARE
PSAPAFNVPAYQSAPAAPVSAPGPTPAPRTVFPQQPQQAQQPQPKPQPPSRPPPPSFTPQ
AAAPASPAPTGPPNNNPPPVAPTSQAQGPPYPSYQGYPGFYQMPMGYNPYAYGQYNVPYM
PYQTTPGQGGYPGAPPAGQPYPGYPQQPPQQQQHPYYPQQ
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgtttatttcagtcccgttgaagaaatcgtctgaagtggagctggtgaagccg
ctgtcgaagtttgtcacagcctcttatccagccggagaggagcaaaccgagtacctccgc
gccgtggaggagttgaacaagctccgcaagaacgcgctgggaaggccgctcgacaaacac
gaaagctcccttgagatcttactcagatactatgatcagttgtgtgcaattgagcccaag
tttcccttctctgaaaaccagctctgcctaaccttcacatggaaggatgcctttgataaa
ggatctctgttcggaggctcagtcaaactctctttggccagtttaggctacgagaaaacg
tgcgtgttgttcaactgtgcagctctggccagtcagattgccgcggagcagaacattgat
aacgatgaatgcctcaaggctgctgccaaatactatcagttggccagcggggccttcagt
cacattaaggacacggtgctctctgccctgaacagagagcccaccatggacatctgtcct
gagaccgtgagcactctgagcagcatcatgctggcccaagctcaggaggtcttcttcctc
aaagccacgtcagacaagatgaaagatgctgtgattgcaaagctggccaatcaggctgca
gatttctacggcgaggcctttaagcagtgtcagttcaaagacacccttcctaaatatttt
tattttcaggaagtgctgccggtcctggcagcaaagcattgcatcatgcaggccaacgcc
gagctgcaccagagcatcctcgccaaacagaagaagcgcttcggagaggagattgctcgt
ctgcagcacgcggctgagctggtgaagacagttgcgtctcgttacgacgagtatgtgagc
gtaaaggacctgactgataagataaatcgagccctcactgcagccaagaaggacaatgac
tttatctaccacgaccgtgtgcctgaagtcaaagacctggaacatatcggaaaggcagcg
ctggtcaaatcttccaccatcacacctccactcagtcagaaattcacagatttgtttgag
aagatggtgcccatggcagtgcagcagtccatgagcttttacagccagagaaaagccgag
acggtgaacagactggtgggaacaatgagggaggccaccaatctctgcaacggggtgttg
gcgtcgctgaacctgcccgctgctctggaggatctgtctggagattctatcccacaatcc
attgctgagaaggccaaatcgattgtggggcagggaggattgcagagcatcgagaagcta
atcaaagacctgcctgagctattaactcgcaacagagagatcctggatgagtctctgaag
atgctggacgacgaggagacaacagacaacgagctgcgagccaagttcaaccagcgctgg
aacagaaccccctcaggagatctgtacaagccccttcgtgcagagggcaccaacttccgt
aacatcctggacaaggcggtgggggctgaccaggtggtgagggaccgctacaacacacag
tgtgacatgatcgcactgctgtgtaaacctgagagcgagctcaccgccgccatcccctcc
gccaacccgacaaagacactacagggcagcgaggtggtgaacgtgctgcgctccctcctc
gcccagctggatgaggtgaagaaggagagggaggtcctggagggagaaatcaaggccgtg
acgttcgacatgtccactacgttcctgaaggcgctcgcccaggacggagcgatcaacgag
gagcagctgtccatgtcccagctcgaccagctgtacggcagctacaaccagaaggtgcag
gccagcctcagcatgcaggaagagctgctgggacaagttcagacgtcccaccaggagttc
gcaagcctcaaacagtccaacagtgatgccaaccagcgggaggaggtcttaaagaaactg
gcttcagctcacgacagctacgtggagatctgcagcaacctgcgcgaaggcaccaagttt
tacaacgacttgacagaaatcctgctcaagttccagaacaaatgcagcgacatcgttttc
gctcgcaagacggagcgggacgagctcctcaaagagctgcagcagagcatcgctcgggag
cccagcgctccggccttcaacgttcccgcctatcagagcgcccctgctgcccccgtctcg
gccccaggtccaacccctgctcccagaacagtctttccccagcagcctcagcaagctcag
cagccccaaccgaagccccaacctccttccaggccaccacccccaagcttcactcctcag
gcagccgcacccgccagcccagcacccaccggtcctcccaacaataaccccccacctgtg
gcaccaacctcccaggcacaaggaccaccttatccctcctaccaaggctatccagggttc
taccagatgcccatgggctacaacccgtatgcgtacggtcagtacaacgtgccctacatg
ccctaccagaccaccccaggacagggaggatacccaggagcccctccagcaggacagccc
taccctggctacccacagcagcccccccagcaacaacaacatccgtactaccctcaacaa
taa
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