Nematolebias whitei (Rio pearlfish): 119427201
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Entry
119427201 CDS
T08042
Symbol
cngb1a
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
119427201 (cngb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119427201 (cngb1a)
Ion channels [BR:
nwh04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
119427201 (cngb1a)
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GFIT
Motif
Pfam:
cNMP_binding
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
119427201
NCBI-ProteinID:
XP_037550712
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Position
2:51486817..51535295
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AA seq
689 aa
AA seq
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MRPLSAASIGSVGFQERLNELVKFFKGRTERQKGRLVDPDASEDDSPKTSPSKAPLPPPP
PPPPGGENKDGMTAVQEQDEGNELNFELMGYPVKIPKLPPIPSWLRAILEYRFPSSIDPF
TDLIYVIWLFFVVAAWNWNMWLIPVRWAFPYQTTENLHLWLLADYTCDFIYIADLLIFQP
RLQFVRGGDIVCDKKDMREHYMTTERFKMDVLSLFPMEVFYLFTGVNPLLRFPRLLKYMA
FFEFNDRMEAVMKKAYIYRVIRTSTYLLYSLHINACLFYWGSDYEGLGSTKWVYNGEGNA
YIRCYYFAVKTLITIGGLPDPTTVFEICFQLINYFVGVFAFSIMIGQMRDVVGAATAGEN
YYRACMDSTIKYMNSYSIPREVQSRIKTWYDYTWKSQGMLDEQELLVQLPAKMRLDIAVD
VNYSIVSKVALFQGCDRQMMFDMLTRLKSVVYLPGDFVCKKGEIGREMYIIKQGEVQVVG
GPDLQTVFVTIRAGSVFGEISLLAGGGGNRRTANVKAHGFANLFILDKKDLAEILVHYPE
SQKLLRKKAKKMLTKDKKPDEKDTQKEATEVIPPRPDTPKLFKAALKVTEQAGIEGTFSK
LKKVYRPPESSAEAPPTISPVPPPSPMHRRYPAPPNSALEDEDESVAETADSSVIIRMTP
QKGEELLTVEVLAAEEEAKEKMEDEKEEK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccgttgtctgctgccagcatcggcagcgttggattccaagaacgcctgaatgag
ctggtcaagttcttcaaaggtcgaacagaacgccagaaaggccgactggtagatccagat
gcatctgaggatgacagccccaaaacctccccgagcaaagctccactgcctcctcctcca
ccacctcctccaggaggggagaacaaggatggcatgactgcagtacaggaacaagatgag
gggaatgagctcaactttgaacttatggggtatccagttaaaatccccaaacttccccct
atccccagctggctgcgagcgatcctggaataccgcttcccctcaagcattgacccattc
actgatctaatttacgtgatctggctgttctttgtggtggcggcgtggaactggaacatg
tggctgatccctgtccgctgggcattcccctaccaaactactgagaacctccacctgtgg
ctgctggcagactacacctgtgacttcatctacattgccgacttactgatcttccagccc
agactgcagtttgtccgtggaggagatatagtgtgcgataaaaaggacatgagggaacat
tacatgaccactgagaggtttaagatggacgtcctcagtctgtttcccatggaagtattt
tacctcttcacaggagtgaaccctctgttgaggttccctcgtctgctgaagtacatggct
ttcttcgagtttaacgacagaatggaggctgtcatgaagaaggcgtacatctacagggtg
atccggacctccacctacctgctgtactctcttcacatcaatgcctgtctcttctactgg
ggttctgactatgaaggactgggatccaccaaatgggtctacaacggagagggcaatgct
tacatccgttgttactactttgctgtgaagaccctgatcaccatcggaggactgccggac
cccaccaccgtctttgagatctgcttccagctcatcaactactttgttggtgtctttgct
ttctccatcatgattggccagatgagagatgtagttggagcagcgactgcaggggagaac
tactaccgggcctgtatggacagcaccatcaagtacatgaactcctacagcataccccgt
gaagttcagagccgcatcaagacctggtatgactacacctggaagagccagggcatgctg
gatgaacaggagctgttggtgcagctgcctgctaagatgaggctggacattgccgtggac
gtcaactactccattgtcagtaaagtggccctgtttcagggctgcgacaggcagatgatg
tttgacatgctgaccaggctcaagtccgttgtatacctgcctggagactttgtttgtaag
aagggggagatcggcagagagatgtacattatcaaacagggggaggttcaggtggtgggg
ggtccagatctgcagacagtgttcgtcaccatcagagctggctcagtgttcggagagatc
agtctgcttgcaggaggtggaggaaaccggcgaacagccaatgtgaaggcacatggattc
gcgaacctcttcatcctggataagaaggacctggcagaaatcctggttcattaccccgag
tctcagaaactcctgcggaagaaagcaaagaagatgctgaccaaggacaaaaagcctgat
gagaaggacacccaaaaagaggcaacagaggttatccctccacgacccgacacccccaaa
ctgttcaaggctgctctgaaggtgacggagcaggcgggcatcgaaggaacgttctccaag
ttgaagaaggtctacagaccacctgagagctctgcagaggctcctcccacaatttctcca
gtcccgcctccttctccgatgcaccggcgctatccagcccctccaaattcagcactggag
gatgaagacgagtctgtagctgagacggcggacagctctgtcatcatcaggatgacgcca
cagaaaggagaggagcttctcaccgtggaggtgctagcagctgaagaggaggcaaaggag
aagatggaggacgagaaagaggagaaatga
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