Nematolebias whitei (Rio pearlfish): 119428911
Help
Entry
119428911 CDS
T08042
Name
(RefSeq) sodium channel protein type 2 subunit alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119428911
Ion channels [BR:
nwh04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
119428911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
ATP-synt_B
GPHH
Spem1
PFF1_TM
IQ
IQCJ-SCHIP1
New_glue
Motif
Other DBs
NCBI-GeneID:
119428911
NCBI-ProteinID:
XP_037552536
LinkDB
All DBs
Position
23:complement(9723933..9803642)
Genome browser
AA seq
2003 aa
AA seq
DB search
MAQLLVPPGPDSFRPFLPESLAAIERRIAEEKARRPRAERRSDEDDENGPRPNSDLEAGK
SLPFIYGDTPPHLVSTPLEDLDTYYSNQKTFIVLNRGKAIFRFNATSALYILNPFNPLRR
LAIKVLVHSMFSMLIMFTILTNCAFMTLSNPPEWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFSVILMAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCMRILNNTSSSNDTDMNLLGFNT
TFNWTEYINDERNYYYLPGRRDALLCGNGSGAGLCPEGFMCIKGGRNPDYDYTSFDTFSW
AFLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLINLILAVVAMAYDEQN
QATIEEAQQKEEEFQAMLEQLKRQQEEAQVAAAAAAAESGEYSGRGAPTSESSSGTSKLS
SKSAKERRNRRKKRKQREEEERDGRDKFHKSESEDSIKRSSFRFSIDANRLSYEKRCSSP
NQSLLSVRGTLFSPRRNSRASLFSFRGRARDMGSENDFADDEHSTFEESDSRRGSLFVPR
RLERRCSAVSQTSLVAPRIVLPANGKMHCSVDCNGVVSLVGGTSVTSPVGLLLPEGTTTD
TEIKKRRSGFFQPSMDYLEEPGGRPRAMSVASILTNTMEELEESRQKCPPCWYRFANTCL
IWDCCPAWLKIKDVVSTVVMDPFVDLTITICIVLNTLFMAMEHYPMTKEFDNVLSVGNLV
FTGIFTAEMCFKIIALDPYYYFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRV
FKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISED
CELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCIIVFMMVMVIGNLVVLNL
FLALLLSSFSADNLAATDEDSEMNNLQIAVGRIQRGISYIKSKVQQFLRSLCFGGGKGLA
LAEESKPLDELHSNGKGNCISNHTPLEITKDPDGMYLVEGNGRPGEGLVVGVGGDTTGKY
PMEECDYMSFIHNPSLTVTVPIAVGESDFENLNTEDFSSDSSDLEGSKEKLDVDPQPLSS
SEGSTVDIRPPGDGAESVELEPEESLDPEACFTEGCVRRFQCCQVSEDVGWFKSWWTLRK
TCFIIVEHNWFESFIIFMILLSSGALAFEDVYIEQRRTIKTVLEYADKVFTYIFILEMLL
KWVAYGFVKYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKTLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCVNTTTDEPFPITV
VNNKSECLSLVNDSARWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRNLEDQP
DYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPTNAFQGFVFDCITKQAFDIVIMILICLNMVTMMVETDDQTKEMDR
ILYWINLVFIVLFTGECALKMISLRHYYFTIGWNIFDFVVVILSIVGMFLSEVIEKYFVS
PTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFAMSN
FAYVKRESGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNKREPDCDSQMEHPGNL
YKGNCGNPSVGIFFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEV
WERFDPDATQFVEYSKLSNFADALDPPLRIPKPNMIQLITMDLPMVSGERIHCLDILFAF
TKRVLGEGGEMDMLRGQMEERFMASNPSKVSYEPITTTLRRKQEEMAAVIIQRAFRHYMI
RQAMKKASALYKEKLKEGVRDPDKDVMVISKFNENSTSDKTDVTPSTASPPSYNSVTKSD
KDKYEKENREKENKGKDLKDKKK
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgcccggaccagacagcttccgccccttcctccccgagtcg
ctggccgccatcgagaggcgcatcgccgaggagaaggcccggagaccgcgggcggagcgc
cgcagcgacgaagacgatgaaaatgggcccaggcccaacagcgacttggaggcggggaag
tctctgcccttcatctacggagacacccctcctcacctggtgtcgacccctctggaagac
cttgacacctactacagcaatcagaagaccttcatagtattgaatcgtgggaaggcaatc
ttccgtttcaatgccacttctgccttgtacatcctgaaccccttcaaccctctaagaaga
ttagctattaaagttttagtgcactcgatgttcagcatgttgatcatgttcaccatcttg
accaactgtgcttttatgaccctgagtaaccccccggaatgggccaagaatgtagagtac
acattcacggggatttacaccttcgagtctcttataaagatcctggcccggggcttctgt
gtggggaagttcacgttcctgcgggacccgtggaactggctggatttcagcgtcatactc
atggcgtatataacagagtttgtaaacctaggcaatgtttccgctctgcgcacattcaga
gtattgcgagctttgaaaactatctcagtaatcccaggcctgaagaccatcgtgggcgcc
ctgatccagtcagtgaagaagctgtcggacgtgatgattctcaccgtgttctgcctcagc
gtctttgccctgatcggcctgcagcttttcatgggcaacctgaggcagaagtgcatgcgc
atcttgaacaacaccagcagcagcaatgacaccgacatgaacctgctgggcttcaacacc
accttcaactggacagagtacatcaacgatgagcgtaattactattaccttcctggccgt
agggatgcactgctatgtggaaatggcagtggtgcagggctctgtccggagggcttcatg
tgtatcaaagggggtcgtaatccagactacgactacacgagcttcgacaccttcagctgg
gccttcctgtctctgttccgactaatgactcaggacttctgggagaacctctaccagcag
accttgcgtgcggcggggaagccctacatgatcttctttgtgctggtgatattcctgggc
tccttctacctcatcaatctgatcctggctgtggtggccatggcatatgacgagcagaac
caggccaccattgaggaggctcagcagaaggaggaggagttccaggccatgttggaacag
ctgaagagacagcaggaggaagctcaggttgccgcggcagcagcggccgcggagagcggc
gagtacagcgggagaggggcccccacctcggagtcgtcctcggggacgtccaagctcagc
tcgaaaagcgccaaggagcgacgcaaccggcggaagaagaggaagcagcgggaggaggag
gagagggacgggcgcgacaagtttcacaagtccgagtccgaggacagcatcaagaggtcc
agcttccgcttctccattgacgccaaccggctgtcttatgagaaacgatgctcctcaccc
aaccagtccctcctcagtgttcgcggcaccctgttctcacctcggaggaacagccgagcc
agcctcttcagcttccgtggccgagcgcgcgacatgggctcggagaacgacttcgccgac
gacgagcacagcaccttcgaggaaagcgacagtcgccgcggctccttgttcgtgccgcga
cgcctcgagcgccgctgcagcgccgtgagccagaccagccttgtggcgccgcggattgtg
ctgcccgccaacggcaagatgcactgctccgtagactgcaacggagtggtgtcgctggtc
ggtgggacgtccgtaacctctcctgtaggtctcctgctgccggagggaacaacaacagat
acagagataaagaagcgtaggtcgggtttcttccagccatccatggactatttagaagaa
ccagggggccggccgagggccatgagtgtggccagtatccttaccaacacaatggaagag
cttgaagagtccagacagaagtgcccgccctgctggtatcgattcgctaacacctgtctg
atctgggattgctgtcctgcatggctgaaaatcaaagacgttgtcagcacggtggtcatg
gacccgtttgtagacctgaccatcaccatttgcatcgtcctcaacaccctgttcatggcc
atggagcactaccccatgaccaaagagttcgataacgtcctctcagttggaaacctggtg
ttcaccggcatcttcacagcagagatgtgcttcaagattatcgccctggatccctactac
tacttccaggagggctggaacatcttcgacggcatcatcgttagcctcagcctgatggag
ctcggcttggccaacgtggaaggcctgtctgtactcaggtcctttagattgctgagggtc
ttcaaactggccaagtcgtggcccacgctcaacatgctcatcaagatcattggtaactct
gtcggcgctctgggcaacttgactcttgtgctggccatcatcgtgttcatctttgccgtg
gtgggcatgcagctgttcgggaagagctacaaggagtgcgtgtgcaagatttctgaggac
tgcgagctgccgcgctggcacatgcacgacttcttccactccttcctcatcgtgttccgg
gtgctgtgtggcgaatggatcgagaccatgtgggactgcatggaggtagcggggcagacc
atgtgcataattgtcttcatgatggtcatggtcataggaaaccttgtggttctgaatctt
ttcctggctctcctcctgagctcatttagcgccgacaacctggcagcgactgacgaagac
agcgagatgaacaacctgcagatcgccgtgggtcgcatccaacggggcatctcgtacatt
aagtccaaagtgcagcagttcctccggagcctctgctttggcggcggcaagggcttggct
ctggcagaagagagcaaacccctggacgagctgcacagcaacggcaagggcaactgcatt
tctaaccacactccactggagatcaccaaagaccctgatgggatgtacctggtggagggc
aacgggaggccaggagaagggctggtggttggggtaggtggggataccacgggcaagtac
ccaatggaggaatgtgactatatgtcgtttattcacaaccccagcctgactgtgacggtg
cccatagctgtgggcgagtcagacttcgagaacttaaacacggaagatttcagcagcgat
tcgtctgacctggagggcagcaaagagaagcttgacgtcgacccacagcctttgagctca
tcggaggggagcacggttgatattcgacccccaggagatggtgctgaatcagtggaactg
gaaccagaggagtctctggatccagaggcctgcttcacagaaggctgcgtccgtaggttc
cagtgctgtcaggtcagcgaggacgtaggctggttcaagagctggtggactctccgaaaa
acctgctttatcatagtggagcacaactggtttgaatccttcatcatattcatgatcctg
ctcagcagtggagcgctggcatttgaggatgtttacatcgagcagcggcgaaccatcaag
acagtgctggagtacgcagacaaggtgttcacgtacatcttcatcctggaaatgctgctg
aagtgggtggcgtacggcttcgtcaagtacttcaccaacgcttggtgctggcttgacttc
cttattgtagatgtgtccttggtgagcctcgtagcaaacgctctgggctactctgagctc
ggcgccatcaaaactctgaggacactgcgagccctccggcccctgagggccctgtctcgg
tttgagggcatgagggttgtggttaacgccctgctgggggccatcccctccatcatgaac
gtgctcctggtctgcctcatcttctggctcatcttcagcatcatgggcgtgaaccttttc
gcagggaagtactactactgcgtcaacaccaccacggacgagcccttccccatcaccgtc
gtcaataacaagagcgagtgcctgagcctggtcaatgacagtgcacgctggaagaacgtc
aaaatcaactttgacaatgttggggctggttatttggccctgctacaagtggcaacattt
aaaggttggatggacatcatgtacgcagctgtggactccagaaatttggaagaccagcct
gactatgaagtgaacctgtacatgtacctctacttcgtcatcttcataatcttcggctcc
ttcttcactcttaacctgtttattggcgtcatcatcgacaacttcaaccagcagaagaaa
aagtttggaggccaggacatcttcatgacagaggaacagaagaaatactacaacgccatg
aagaagctgggttccaagaaaccgcaaaagcctattcctaggccaacgaatgcatttcaa
ggcttcgtgtttgactgcatcacaaagcaggcgtttgacattgtaatcatgatcctcatc
tgccttaacatggtgaccatgatggtagaaacagatgaccagacaaaagagatggacagg
atcctttactggattaacctggttttcattgtgctcttcactggggagtgtgcgctcaag
atgatctcgttgcgtcactattacttcaccattggttggaacatctttgactttgtggtg
gtgatcctttcgattgtaggtatgtttttatctgaggttattgagaagtactttgtgtct
ccaacgctgttccgagtgatacgactcgcccggataggtcgcattcttcgccttatcaaa
ggtgccaagggcatccggacgctcctctttgccttgatgatgtcactacctgccctgttc
aacattggccttctactcttcctggttatgttcatctatgccatctttgccatgtccaac
tttgcttacgtcaaaagggagtcagggatcgatgacatgttcaattttgagaccttcggg
aacagtatgatctgtttgtttcagattacaacctcagctgggtgggacggactgttggca
cccatacttaacaagagggaacctgactgtgacagtcaaatggaacacccaggaaacttg
tacaagggcaactgtggtaacccttcagtgggcatctttttctttgttagctacatcatc
atttgctttctcattgtggttaacatgtacattgccgtcatcctggagaactttagcgtg
gctacagaggaaagtgctgagccgctgagcgaggacgattttgagatgttctacgaggtg
tgggaacgcttcgaccctgacgccactcagtttgtagagtacagcaagctctcaaacttt
gcagatgctctagacccaccgttacgcattcccaagcctaatatgatccagctcataacg
atggacctgccgatggtgagtggcgagcgcatccactgccttgacatcctgtttgctttc
accaagcgagtgttgggagaaggcggtgagatggacatgttacgtggacagatggaggag
cgcttcatggcctccaacccctccaaggtttcctacgagcccattaccaccaccctgcgc
cgcaagcaggaggaaatggctgccgtaattatccagagagccttccgccactacatgatc
cgccaggccatgaaaaaggcctccgccctctacaaggagaagctaaaggagggcgttcgc
gacccagacaaggatgtgatggtcatcagcaagttcaacgaaaactccacgtcggataaa
acagacgtgactccttccacggcctccccgccctcctacaacagtgtgacgaagtcagac
aaggacaaatacgaaaaagaaaaccgggaaaaggaaaacaaagggaaagacttgaaagac
aaaaagaaatag
DBGET
integrated database retrieval system
