Nitrospina watsonii: NSPWAT_0941
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Entry
NSPWAT_0941 CDS
T08754
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
nwt
Nitrospina watsonii
Pathway
nwt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nwt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NSPWAT_0941 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwt03019
]
NSPWAT_0941 (rny)
Messenger RNA biogenesis [BR:
nwt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NSPWAT_0941 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
CAI2717800
UniProt:
A0ABM9HCA2
LinkDB
All DBs
Position
NSPWAT:1000087..1001676
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AA seq
529 aa
AA seq
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MGNSVSGMELSLVTLIVSLVGTLGIGFFGGYLLRKKFAEYQLKESEALGEKIIQEAEKEA
ETRKRQAELEIKEEKIATRARMEKELEGEMGELREQEKALRQKESELNNLIEKNRQAERS
FDYRGKELDEREAEAKKQKQEYQVLVAEQIKQLESISHYTAEEAKEAIRNQMLEEARQDA
ARQVKRIEEDARIHADDEARRLISMAVQRLASDHVAETSVSVVELPNDDIKGRIIGREGR
NIRALEQSTGVDLIIDDTPGAVVLSSFDPIRREIARRALEKLTLDGRIHPGRIEEVVSKC
KKEINQDIIEAGEQAVMDVGVDRMHPDMVKLLGRLKYRTSYTQNVLEHSKEVAWVCGSMA
SEMGLDVQLAKRSGLLHDIGKAVDRQTDGTHTALGVDIANRYNEHKYVVNAIGAHHEDIE
PESIYAVLVAAGDTISASRPGARREMLETYVKRMSQLEEIGDSFKGVEKTYAIQAGREVR
IVVVPDNITDDEAILLSKDVAKRIEKEVTYPGEIKITVVRESRFVQIAR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgggtaattcagtgagtggcatggaactgagtctggtgacgttgattgtgagcctggtc
gggactctcggcatcggttttttcggaggataccttctgcgcaaaaagttcgcggagtat
cagttgaaggagtcggaggccctgggcgaaaaaatcattcaggaagcggaaaaagaagcg
gagacgcgcaagcgtcaggccgaactcgagatcaaggaagaaaaaatcgccacccgggcc
cgcatggaaaaggaactggaaggcgagatgggcgaattgcgtgaacaggaaaaagccctg
cgccagaaggaatcggaactgaataacctgatcgaaaaaaaccggcaggccgaacgcagt
ttcgattaccggggcaaggagctggacgagcgggaagcggaagccaaaaagcagaaacag
gaataccaggtcctcgttgccgaacagatcaagcagctcgaatccatcagccattacacg
gcggaggaagccaaggaagccatccgcaaccagatgctggaggaagcccggcaggatgcg
gcgcgccaggtgaaacgcatcgaagaggatgcccgcatccacgcggacgacgaggcccgc
cgcctcatctccatggcggtgcaacggctggcttcggaccacgttgccgaaacgtcggtg
tcggtggtggagttgcccaacgacgatatcaaaggccgcatcatcggccgcgaaggccgc
aatatccgcgccctggaacagagcaccggtgtcgatctcatcatcgacgacacgccgggc
gcggtggtgctgtcgagcttcgatcccatccgccgggaaatcgcccgccgtgctttggag
aaactgacgctggacgggcgcatccatcccggccggatcgaggaagtcgtctccaaatgc
aaaaaggaaatcaaccaggacatcattgaggccggtgagcaggcggtcatggatgtgggc
gtggaccgcatgcatccggacatggtgaagctcctgggccgcctcaagtaccgcaccagc
tacacgcagaacgtgctcgaacactccaaggaagtggcgtgggtgtgcggttccatggct
tcggaaatgggcctcgatgtgcaactggccaaacgttccggccttttgcatgacatcggc
aaagcggtggaccgccagaccgacggcacgcacacggcgctgggcgtggacatcgccaac
cgttacaacgaacacaagtacgtggtcaatgccatcggcgcgcaccacgaggacatcgaa
ccggaatccatttacgcggtgcttgtggccgcaggcgacaccatctccgcgtcacggccc
ggagcccggcgcgaaatgctggagacctacgtcaaacgcatgtcgcaactggaagagatc
ggcgattcattcaagggggtcgagaagacctacgccattcaggccgggcgcgaagtgcgc
atcgtggttgttcccgacaacatcaccgacgacgaagccatcctgctgtcgaaggacgtg
gccaagcgcatcgaaaaggaagtcacgtatcccggcgagatcaagatcactgtggtgcgc
gaatcccgctttgtgcagatcgcccgctga
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