KEGG   Nitrospina watsonii: NSPWAT_0941
Entry
NSPWAT_0941       CDS       T08754                                 
Symbol
rny
Name
(GenBank) Ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
nwt  Nitrospina watsonii
Pathway
nwt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nwt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NSPWAT_0941 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nwt03019]
    NSPWAT_0941 (rny)
Messenger RNA biogenesis [BR:nwt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     NSPWAT_0941 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 KH_PNO1_2nd HDOD KH_KhpA-B KH-I_KHDC4-BBP KH_2
Other DBs
NCBI-ProteinID: CAI2717800
UniProt: A0ABM9HCA2
LinkDB
Position
NSPWAT:1000087..1001676
AA seq 529 aa
MGNSVSGMELSLVTLIVSLVGTLGIGFFGGYLLRKKFAEYQLKESEALGEKIIQEAEKEA
ETRKRQAELEIKEEKIATRARMEKELEGEMGELREQEKALRQKESELNNLIEKNRQAERS
FDYRGKELDEREAEAKKQKQEYQVLVAEQIKQLESISHYTAEEAKEAIRNQMLEEARQDA
ARQVKRIEEDARIHADDEARRLISMAVQRLASDHVAETSVSVVELPNDDIKGRIIGREGR
NIRALEQSTGVDLIIDDTPGAVVLSSFDPIRREIARRALEKLTLDGRIHPGRIEEVVSKC
KKEINQDIIEAGEQAVMDVGVDRMHPDMVKLLGRLKYRTSYTQNVLEHSKEVAWVCGSMA
SEMGLDVQLAKRSGLLHDIGKAVDRQTDGTHTALGVDIANRYNEHKYVVNAIGAHHEDIE
PESIYAVLVAAGDTISASRPGARREMLETYVKRMSQLEEIGDSFKGVEKTYAIQAGREVR
IVVVPDNITDDEAILLSKDVAKRIEKEVTYPGEIKITVVRESRFVQIAR
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgggtaattcagtgagtggcatggaactgagtctggtgacgttgattgtgagcctggtc
gggactctcggcatcggttttttcggaggataccttctgcgcaaaaagttcgcggagtat
cagttgaaggagtcggaggccctgggcgaaaaaatcattcaggaagcggaaaaagaagcg
gagacgcgcaagcgtcaggccgaactcgagatcaaggaagaaaaaatcgccacccgggcc
cgcatggaaaaggaactggaaggcgagatgggcgaattgcgtgaacaggaaaaagccctg
cgccagaaggaatcggaactgaataacctgatcgaaaaaaaccggcaggccgaacgcagt
ttcgattaccggggcaaggagctggacgagcgggaagcggaagccaaaaagcagaaacag
gaataccaggtcctcgttgccgaacagatcaagcagctcgaatccatcagccattacacg
gcggaggaagccaaggaagccatccgcaaccagatgctggaggaagcccggcaggatgcg
gcgcgccaggtgaaacgcatcgaagaggatgcccgcatccacgcggacgacgaggcccgc
cgcctcatctccatggcggtgcaacggctggcttcggaccacgttgccgaaacgtcggtg
tcggtggtggagttgcccaacgacgatatcaaaggccgcatcatcggccgcgaaggccgc
aatatccgcgccctggaacagagcaccggtgtcgatctcatcatcgacgacacgccgggc
gcggtggtgctgtcgagcttcgatcccatccgccgggaaatcgcccgccgtgctttggag
aaactgacgctggacgggcgcatccatcccggccggatcgaggaagtcgtctccaaatgc
aaaaaggaaatcaaccaggacatcattgaggccggtgagcaggcggtcatggatgtgggc
gtggaccgcatgcatccggacatggtgaagctcctgggccgcctcaagtaccgcaccagc
tacacgcagaacgtgctcgaacactccaaggaagtggcgtgggtgtgcggttccatggct
tcggaaatgggcctcgatgtgcaactggccaaacgttccggccttttgcatgacatcggc
aaagcggtggaccgccagaccgacggcacgcacacggcgctgggcgtggacatcgccaac
cgttacaacgaacacaagtacgtggtcaatgccatcggcgcgcaccacgaggacatcgaa
ccggaatccatttacgcggtgcttgtggccgcaggcgacaccatctccgcgtcacggccc
ggagcccggcgcgaaatgctggagacctacgtcaaacgcatgtcgcaactggaagagatc
ggcgattcattcaagggggtcgagaagacctacgccattcaggccgggcgcgaagtgcgc
atcgtggttgttcccgacaacatcaccgacgacgaagccatcctgctgtcgaaggacgtg
gccaagcgcatcgaaaaggaagtcacgtatcccggcgagatcaagatcactgtggtgcgc
gaatcccgctttgtgcagatcgcccgctga

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