Nocardia yamanashiensis: LTV02_00980
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Entry
LTV02_00980 CDS
T07935
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
nya
Nocardia yamanashiensis
Pathway
nya00190
Oxidative phosphorylation
nya03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nya00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
LTV02_00980
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LTV02_00980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nya03019
]
LTV02_00980
Enzymes [BR:
nya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
LTV02_00980
Messenger RNA biogenesis [BR:
nya03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LTV02_00980
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
UGT42037
LinkDB
All DBs
Position
complement(205518..207746)
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AA seq
742 aa
AA seq
DB search
MIVRVSDTETVKQSPLLPAAPPAATPPPTPTPPLPQDRYVNRELSWLDFNARVLALAEDH
SQPLLERAKFLAIFASNLDEFYMVRVAGLKRRAETGLSVRSADGLSPTEQLEMIAARTQE
IAERHARVFLDQVLPALTAEGIAIIRWNELDDAEKQRLSGYFQDQVFPVLTPLAVDPAHP
FPYISGLSLNLAVTVKDSVTGGEHFARVKVPDNVDRFVRVRRTVGSRETAVAATGREPVG
RDSAGGQSSMAAFLPMEELIAAHLDQLFPGMEVVEQHSFRITRNADLEVEEDRDEDLLQA
LERELARRRFGSPVRLEVSDDMTEHMLELLLRELDVDPADVIQVPGLLDLSCLWQVYGVD
RPNLKDAPYVPATPPAFGERETPRNVFAALREGDVLVHHPYDSFSTSVQRFIEQAAADPQ
VLAIKQTLYRTSGDSPIVNALIDAAEAGKQVVALVEIKARFDEQANIKWARALEQAGVHV
VYGLVGLKTHCKTCLVVRREGATIRRYCHIGTGNYNPKTARLYEDVGLLTAAPEIGADLT
DLFNSLTGYSRKANYRNLLVAPTGVRAGIVERIERETELARQGEAARIRLKANAIVDEQI
IDALYRASQAGVPVEIVVRGICGLRPGVPGMSENIEVRSILGRYLEHSRVLHFQAQNEYW
IGSADMMHRNLDRRVEVLAQVKDPRLAEQLNQMFDSALDPATRCWVLQADGSWAAQPDPS
VPDVQVRDHQEYLMRLRRPDRQ
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgagagtgagcgatacggaaaccgtcaagcaatcgccgctactacccgcggcg
ccgcccgcggcaaccccaccgcccactccgacaccgccgctgccacaggaccggtatgtg
aaccgggaattgagctggctcgatttcaacgcccgcgtgctcgccttggccgaagaccat
tcccagccgctgctggagcgcgccaagttcctcgccattttcgcgtccaatctggacgag
ttctacatggtgcgggtggccgggctcaagcgccgcgcggaaaccgggctgtcggtgcgg
tccgcggacgggttgtccccgaccgaacaactggagatgatcgccgcccgcacccaggag
atcgccgagcggcacgcgcgggtgttcctggaccaggtgctgcccgcgctgaccgccgag
ggcatcgccattatccggtggaacgagctcgacgacgccgaaaagcagcgcctgtccggg
tatttccaggatcaggtcttcccggtgctgaccccgctggcggtggatccggcccacccg
ttcccgtacatcagcggcctgagcctcaatctcgccgtgacggttaaggattcggtgacc
ggcggcgagcacttcgcgcgagtcaaggtgcccgacaatgtggatcgcttcgtgcgggtg
cgccgcaccgtgggcagccgcgagaccgccgtcgccgccaccggccgcgaacccgtcggc
cgcgactccgccggcgggcagtcctccatggccgccttcctgcccatggaagagctgatc
gccgcccacctggatcagctgttcccgggaatggaagtggtggaacagcattcgttccgg
atcacccgcaatgccgacctcgaggtcgaggaggatcgcgacgaggacctgctgcaggcc
ctggaacgcgaactggcccgccgccgcttcggatccccggtgcggctggaggtctccgac
gacatgaccgagcacatgctcgaactgctgctgcgggaactcgatgtcgacccggccgac
gtgatccaggtgcccggcctgctcgacctgtcctgcctgtggcaggtgtacggcgtggac
cggcccaacctcaaggacgccccgtacgtgcccgccacgcccccggcgttcggcgaacgg
gaaacgccccgaaacgttttcgccgcgctgcgcgagggcgacgtgctggtgcaccacccg
tacgactccttctccaccagcgtgcagcgcttcatcgaacaggccgcggccgacccgcag
gtgctcgccatcaagcagacgctgtaccgcacctccggcgactcccccatcgtgaacgcg
ctcatcgacgccgccgaggccggtaagcaggtggtggcgctggtcgagatcaaggcccgc
ttcgacgagcaggccaacatcaaatgggcgcgcgcgctggagcaggcgggcgtgcacgtg
gtctacggcctggtcgggctcaagacgcactgcaagacctgcctggtggtgcgccgcgaa
ggagccaccatccgtcgctactgccacatcggcaccggtaattacaatccgaagaccgcg
cgcctgtacgaggatgtcggattgctcacggccgcaccggagatcggcgccgacctcacc
gacctgttcaactcgctgaccgggtactcgcgaaaagccaactaccgcaacctgctggtc
gccccgaccggcgtgcgagccgggatcgtggagcggatcgagcgcgagaccgagctggcg
cggcagggcgaagcggcgcgaatccggctgaaggccaatgccatcgtggacgagcagatc
atcgacgcgctctaccgcgcctcccaggccggcgtgccggtggagatcgtggtgcgcggc
atctgcgggctgcgaccgggcgttccgggcatgagcgagaacatcgaggtgcgctcgatt
ctcggccggtacctggaacattcgcgggtgttgcacttccaggcgcagaacgagtactgg
atcggcagcgccgacatgatgcaccgcaatctggaccggcgcgtggaagtgctggcgcag
gtgaaggatccgcgtctggccgagcagctcaaccagatgttcgattccgcgctcgacccc
gccacccgctgctgggtgctgcaggccgacggcagctgggccgcccagcccgatccctcg
gtgccggacgtgcaggtgcgcgaccaccaggagtacctgatgcgactgcgccggccggat
cgccagtga
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