Neisseria zoodegmatis: SAMEA4504057_0727
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Entry
SAMEA4504057_0727 CDS
T06683
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
nzo
Neisseria zoodegmatis
Pathway
nzo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nzo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA4504057_0727 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nzo03400
]
SAMEA4504057_0727 (xthA)
Enzymes [BR:
nzo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SAMEA4504057_0727 (xthA)
DNA repair and recombination proteins [BR:
nzo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SAMEA4504057_0727 (xthA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
MIase
Motif
Other DBs
NCBI-ProteinID:
SNU79239
UniProt:
A0AB38DPT7
LinkDB
All DBs
Position
1:800996..801766
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AA seq
256 aa
AA seq
DB search
MKIATWNVNSLNVRLPQVQDWLQQHSPDVLVLQELKLDQDKYPAAVFQMGGWHTVWSGQK
TYNGVAIISKEAPQDVHTGLPALPDDPQRRVIAATVNGVRVINVYCVNGEAPDSPKFQYK
EQWFAALTEFVRDEMSSYEKLVLLGDFNIAPTDLDCYDPEKWREKIHCTSIERSWFQKLL
DLGLTDSLRHRHPEEVMYTWWDYRGAMFQRKQGLRIDHLLITPALRDALQDVQVDLEARA
QERPSDHAPVWAEFAV
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgctacttggaacgtaaattccctcaatgtgcgcctgccgcaggtgcaggat
tggctgcaacagcacagccccgacgtattggttttgcaggaactcaagctcgaccaagac
aaataccccgccgccgttttccaaatgggcggctggcataccgtgtggagcggtcaaaaa
acctataacggcgtggccatcatcagcaaagaagccccgcaagacgtgcacaccggcctg
cccgcgctgcccgacgacccgcagcggcgcgtgattgccgccaccgttaacggcgtgcgc
gtgatcaacgtatattgcgtgaacggcgaagcacccgacagcccgaaattccaatataaa
gaacaatggttcgccgcgctgaccgaatttgtgcgcgatgagatgagcagctacgaaaag
ctggtgttgctgggcgatttcaatatcgctcccaccgatttggattgctacgaccccgaa
aaatggcgtgaaaaaatccattgcaccagtatcgagcggtcgtggttccaaaaactgctc
gatttagggctgaccgacagcctgcgccaccgccatcccgaagaagtgatgtacacatgg
tgggattaccgcggcgcgatgttccaacgcaaacagggtttgcgtatcgaccacctgctg
attacccccgccttgcgcgatgccctgcaagacgtgcaggtggatttggaagcccgcgca
caagaacgccccagcgaccatgcgccggtgtgggcggagtttgccgtttaa
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