KEGG   Strawberry lethal yellows phytoplasma (CPA) NZSb11: SLY_0498
Entry
SLY_0498          CDS       T02674                                 
Symbol
hup
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
nzs  Strawberry lethal yellows phytoplasma (CPA) NZSb11
Brite
KEGG Orthology (KO) [BR:nzs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nzs03032]
    SLY_0498 (hup)
   03036 Chromosome and associated proteins [BR:nzs03036]
    SLY_0498 (hup)
   03400 DNA repair and recombination proteins [BR:nzs03400]
    SLY_0498 (hup)
DNA replication proteins [BR:nzs03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    SLY_0498 (hup)
Chromosome and associated proteins [BR:nzs03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    SLY_0498 (hup)
DNA repair and recombination proteins [BR:nzs03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      SLY_0498 (hup)
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: AGL90418
UniProt: R4S0X8
LinkDB
Position
complement(431414..431698)
AA seq 94 aa
MNTLDFLKILAEKHNVSQKEAAKILDSFVAAIYESVQSFEENEKLTLTGFGTFGAKQRTT
RQGKNPRTGETIDIPAKKVPVFKFSKNFKDVFVS
NT seq 285 nt   +upstreamnt  +downstreamnt
atgaatacattagactttttgaaaatattagcagaaaaacataatgttagccaaaaagaa
gctgccaaaattttagatagctttgttgcagcaatttatgaaagcgttcaatcatttgaa
gaaaatgaaaaacttactttaactggttttggcactttcggagctaaacaaagaactact
cgccaaggaaaaaacccaagaactggcgaaactattgatattccagctaaaaaagttcct
gtttttaaatttagtaaaaatttcaaagatgtttttgtttcctaa

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