Strawberry lethal yellows phytoplasma (CPA) NZSb11: SLY_0498
Help
Entry
SLY_0498 CDS
T02674
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
nzs
Strawberry lethal yellows phytoplasma (CPA) NZSb11
Brite
KEGG Orthology (KO) [BR:
nzs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nzs03032
]
SLY_0498 (hup)
03036 Chromosome and associated proteins [BR:
nzs03036
]
SLY_0498 (hup)
03400 DNA repair and recombination proteins [BR:
nzs03400
]
SLY_0498 (hup)
DNA replication proteins [BR:
nzs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SLY_0498 (hup)
Chromosome and associated proteins [BR:
nzs03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SLY_0498 (hup)
DNA repair and recombination proteins [BR:
nzs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SLY_0498 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AGL90418
UniProt:
R4S0X8
LinkDB
All DBs
Position
complement(431414..431698)
Genome browser
AA seq
94 aa
AA seq
DB search
MNTLDFLKILAEKHNVSQKEAAKILDSFVAAIYESVQSFEENEKLTLTGFGTFGAKQRTT
RQGKNPRTGETIDIPAKKVPVFKFSKNFKDVFVS
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaatacattagactttttgaaaatattagcagaaaaacataatgttagccaaaaagaa
gctgccaaaattttagatagctttgttgcagcaatttatgaaagcgttcaatcatttgaa
gaaaatgaaaaacttactttaactggttttggcactttcggagctaaacaaagaactact
cgccaaggaaaaaacccaagaactggcgaaactattgatattccagctaaaaaagttcct
gtttttaaatttagtaaaaatttcaaagatgtttttgtttcctaa
DBGET
integrated database retrieval system