Ornithorhynchus anatinus (platypus): 100074556
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Entry
100074556 CDS
T01045
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100074556 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oaa03019
]
100074556 (CNOT1)
Messenger RNA biogenesis [BR:
oaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100074556 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100074556 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
100074556
NCBI-ProteinID:
XP_007670161
Ensembl:
ENSOANG00000012109
LinkDB
All DBs
Position
11:complement(35193001..35276266)
Genome browser
AA seq
2382 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCASIEECRSIIRQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLQNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFNFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLGGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTAALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTAKTITITRPTGVSFKKDVPPSINTTNIDTLLVA
TDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSI
EPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGM
ITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTMA
IMNVLAELHQEHDLKLNLKFEIEVLCKNLALDISELKPGNLLKDKDRLKNLEEQLSAPKK
DVKQPEELPAITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTIP
LFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIAA
HHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQREMMEQAAAQLAQDNCE
LACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLKV
GGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYDKCITELEQ
HLHAIPPALAMNPQAQALRSLLEAVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADLL
LRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQQ
YDLHLAQSMENGLNYMAVAFAMQLVKILLVDERTVAHVTEADLFHTIETLMRINAHSRGN
APEGLPQLMEVVRANYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWVN
LYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRAQ
AEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVL
LQDHDVRQNDFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGF
VYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKG
TLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDM
LSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQL
INALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQL
RYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPA
FKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7149 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggc
cccgaagcagacaggcatttattacgctgcctattttcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcagtttctgattcaggagtgtgcgtcg
ctgattacgaagccaaactttatctcgacgctgtcctatgccattgataatcccttgcac
tatcagaagagtctaaagccgtcaccccacttatttgcccaattgagtaaagttctcaag
ttaagcaaagttcaggaggtaatttttggtcttgcgctgttgaattcatctagctcagat
ctacgaggttttgctgcccagtttatcaaacaaaagcttccagaccttctgcgctcttac
atcgacgcggacgttagcggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ttgcacctcctcctctcccatctcctatttgggcagaagggagccttcggggttggacag
gaacagatcgacgcattcctcaagacgctgcgtagagattttccccaggaacgctgtcct
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgactctggagggatagctaaaaccatgatggagagctctcttgcagacttcatgcaa
gaagttggctatggcttttgtgcaagtattgaagaatgtcgcagtataatcaggcagttt
ggtgttcgggaggtcacagcagcccaggtcgccagggttttgggaatgatggcccgcact
cattcagggttgacggatggaattccattacagtccatttcagcccctggcagtgggata
tggagtgatggaaaagataaaagtgatggtgcacaggcccatacctggaatgtggaagtc
ttaattgatgtcttgaaggagctgaaccctagtttgaacttcaaggaagtaacttacgaa
ctggaccaccctggatttcaaattcgtgacagtaagggactgcagaatgtggtgtatggc
attcagagaggccttggcatggaagtcttcccagtagatctcatttataggccttggaaa
cacgccgagggccagctctccttcattcagcattccctcataaatccagagatcttctgt
tttgctgattatccctgtcatactgtggcaactgacatcctgaaagcaccaccggaagac
gacaatcgagaaatagccacatggaagagcctggacttgattgaatccctgttgcgactg
gctgaggtgggccagtatgagcaggtcaaacaactcttcaacttccctatcaaacactgt
ccggatatgttggtattagccttactgcagatcaacacctcctggcataccttgcgacat
gaactcatctccacactgatgccaattttccttggaaaccaccctaattctgccattatt
ttgcactatgcatggcatggtcagggccagtctccttcaattcgccaacttatcatgcat
gcaatggcagaatggtacatgagaggggagcagtacgaccaggcaaaattatctcggatt
cttgacgtggcccaagacctgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgtcgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggagcccttcatccaggcgtgtatgactttctta
aagagacggtgcccttctatcttgggtggccttgccccagagaaggatcagcccaaaagc
gcccaacttcctccagaaacactggcaacaatgttggcctgtcttcaagcgtgtgccggg
agtgtttctcaagagctttcggagactatcctcactatggtggccaactgcagcaatgtt
atgaacaaggctagacagccaccccccggagtcatgccaaaaggacgccctcccagtgca
agcagcttagacgccatttctcccgtacagattgactctcttggtgggatggcatctctt
agtataggtggttcagctgccccccacacccagagtatgcagggttttcctccaaatttg
ggttctgccttcagtacccctcagtcaccagcaaaagcatttccacccctttctacccca
aatcagaccacagctttcagcggtatcggagggctctcttcacaacttccagtaggtggt
ctcggtacaggcagcctgaccggtataggaactgccgctcttgggctccccgcagtgaat
aatgatccgtttgtgcagaggaaactgggcacatctggactgaaccagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggcaaatcagcacttt
agcaaagagatagatgatgaagcaaacagctattttcagcgtatttataaccatccacca
cacccaaccatgtctgttgatgaggttttagaaatgctacagaggtttaaagactccaac
ataaaacgggaacgagaagtgtttaactgtatgttgaggaacttgtttgaagagtatcgg
tttttcccccagtacccagataaagagctgcatataacagcctgcctctttggtgggata
atagaaaaaggactggtcacttacatggctctgggtcttgccctgcgctatgttcttgaa
gccttacgcaagccgtttgcatccaaaatgtattattttggaatcgctgcactagatagg
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagtttcctcatcatctacaggagtacattgaatacggacagcaatctagagac
cctcctgtaaaaatgcagggttccatcaccacccctggaagtattgcacttgcccaggct
caggcccaggcccaggttccagcaaaagctcctcttgctggtcaagtcagcactatagta
accacctctaccaccaccactgctaaaaccatcacgatcacccgaccaacaggagtcagc
ttcaaaaaggatgtgccaccttctattaatactaccaacatagatacactgctagtggcg
accgatcaaactgagagaattgtggaaccaccagaaaatgtgcaagagaaaattgctttc
atcttcaacaatctctctcaatcaaacatgacacagaaggttgaggagctgaaagaaacg
gtaaaagaggaatttatgccttgggtttcacaatacctggtaatgaagagagtcagtatt
gagccaaacttccacagcttgtattcaaatttcctcgatactcttaagaaccctgaattt
aacaagatggttctgaatgaaacctacagaaacatcaaagtgctactgacatcagataaa
gctgcagccaatttttcagaccgttccctactgaagaacctgggccactggctgggaatg
attacactagctaaaaataaacccatcttgcacactgacttggatgtaaaatctttgctg
ctcgaagcttacgttaaaggacaacaagaattgctttatgtggtgccctttgttgccaaa
gtactggaatccagtgttcgaagtgtggtgttcaggccaccaaacccctggactatggct
atcatgaacgtcttagccgagttacatcaagaacatgacctgaagctaaacttgaaattt
gaaattgaggtgctctgcaagaaccttgcgttagacatcagtgagctaaaacccgggaac
cttctgaaggataaagatcgattaaaaaacttagaagaacagctctctgctccaaagaaa
gatgtaaaacaaccagaagaacttccagccatcacaacaactacggcctctacaacacca
gccaccagtacgacctgtacggcgacagttcctcctcagccccagtacagctaccacgac
atcaacgtgtactcgctcggagggctggccccacacattactctaaatcccacgattccg
ttgttccaggcccatccacagttaaagcagtgtgtgcgccaagcaatcgaacgtgctgta
caagagcttgtccatccggtggtggataggtccattaagattgccatgactacttgtgaa
caaatagtcaggaaggattttgcactggattcagaggagtcacgcatgcgaatagcagca
catcacatgatgaggaatctgacagccggaatggctatgataacttgcagggaacctttg
ctgatgagtatagctaccaacctgaaaaacagcttcgccaccgcactgcgggctgcgtct
cctcagcaaagggaaatgatggagcaggcagctgcgcagttagctcaggacaattgtgaa
ttagcctgctgcttcattcagaagactgccgtagaaaaagcaggccccgaaatggacaag
aggctagcaactgagtttgagctgcgcaaacacgctaggcaggagggccgtaggtactgt
gatcccgttgtattaacctatcaggctgagcggatgccagaacagatcaggctgaaggta
ggaggtgtggaccccaaacagctggctgtttatgaggagtttgcacgcaatgttcctggc
ttcttgcctactaatgatttaacccagcccacgggattcttagcgcagcctatgaaacaa
gcttgggcaacagacgatgtagcccagatttatgacaagtgtattacagaactggaacag
cacctgcatgccattccacctgcattggccatgaaccctcaagctcaggctcttcgcagc
cttttggaagctgtggtgctgtctcgcaactctcgtgatgccatagcggcacttgggttg
cttcagaaggcagtagagggtttactggatgccacaagcggtgcagatgccgacctattg
ctacgttaccgagagtgtcatctacttgtactgaaagcgctgcaggatggtcgggcctat
ggttcaccgtggtgtaataaacagatcacgaggtgcctgatcgagtgtcgggatgaatat
aagtataacgttgaagcagtggaactgctgattcggaaccatctagttaacatgcagcag
tatgacctgcacctggctcagtcaatggagaatggtttgaactacatggcagtggcattt
gctatgcagttggtgaagatcctgttggtggatgaaaggactgtagcccatgtaacagag
gcagatttatttcacaccattgaaactctgatgaggattaatgctcactccagaggaaat
gcccccgaaggattaccccagctgatggaagtggtgcgtgccaactatgaagcaatgatt
gatcgtgctcatggaggtcctaacttcatgatgcactctgggatctctcaagcctcagaa
tatgatgaccctccaggcctaagggagaaggcagagtatcttctgagggaatgggtgaat
ctctaccattcagccgcagctggtcgcgacagtaccaaagctttctctgcgtttgttgga
caggtagagcttttggaaagaaagatgcaccagcaaggaatcttgaagaccgacgacctc
ataacaaggttctttcgcctgtgcacagaaatgtgtgttgagatcagctaccgagctcag
gccgagcagcaacacaatcccgcagccaaccctaccatgatccgagccaaatgctatcat
aacctggatgcttttgtgcgacttattgccctcctggtcaaacattcgggggaggccacc
aatacggtcaccaagataaacctgctgaataaggttcttgggatcgtggtgggcgtcctc
ctgcaggatcacgatgttcggcaaaacgattttcagcagcttccataccaccgtattttc
atcatgttgcttttggaactcaatgcccccgagcatgtcttggagaccattaattttcag
acgctcacagctttctgcaatacattccacatcttgaggcctaccaaagctcccggcttt
gtgtatgcctggcttgagctgatctcccaccggatatttatcgcacggatgctggcacat
acaccacagcagaagggctggcccatgtatgcccaactactgattgatttgttcaaatat
ttggctcccttccttagaaatgtggaacttaccaaacctatgcaaatcctgtacaagggt
actttacgagtgctcctggtcttattgcatgactttccggaattcctttgtgattaccat
tatgggttctgtgatgtcatcccacccaattgcatccagctaagaaatttgatcctgagt
gcctttccacgcaacatgaggctcccagacccattcactcccaacttaaaggtggatatg
ttgagtgaaattaacatcgctcctagaatcctcaccaatttcacaggagtgatgccacct
cagttcaaaaaagatctggattcctatctcaaaacccgctcaccagtcacgttcctttcg
gacttgcgcagcaacctgcaggtatcgaatgaacccggtaatcgttacaacatccagttg
atcaacgccctggtgctctacgtaggtactcaagccatcgcccacatccacaataaaggt
agcacgccatccatgagcaccatcacccactcggctcacatggacatcttccagaacctg
gccgtggacctggacactgaaggtcggtacctgttcctgaatgccatcgctaaccagctg
cggtacccgaatagccacactcattacttcagttgtaccatgctgtacctgttcgcagaa
gccaacactgaagccatccaggaacagatcaccagggttctcttggaacggttgattgta
aataggccacatccttggggtctcctcattaccttcatcgagctgattaaaaacccagcg
tttaagttctggaaccacgagttcgttcactgtgccccagaaattgaaaagttgttccag
tcggttgcacaatgctgcatggggcagaagcaggctcagcaagtgatggaagggaccggt
gccagttaa
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integrated database retrieval system
