Ornithorhynchus anatinus (platypus): 100082294
Help
Entry
100082294 CDS
T01045
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa04622
RIG-I-like receptor signaling pathway
oaa05161
Hepatitis B
oaa05162
Measles
oaa05164
Influenza A
oaa05168
Herpes simplex virus 1 infection
oaa05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
100082294 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
100082294 (IFIH1)
05171 Coronavirus disease - COVID-19
100082294 (IFIH1)
05164 Influenza A
100082294 (IFIH1)
05162 Measles
100082294 (IFIH1)
05168 Herpes simplex virus 1 infection
100082294 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oaa04054
]
100082294 (IFIH1)
Enzymes [BR:
oaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100082294 (IFIH1)
Pattern recognition receptors [BR:
oaa04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
100082294 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
CARD_2
RIG-I_C
ResIII
DEAD
Helicase_C
CARD
SWI2_SNF2
DUF3638
5HT_transport_N
SRP_TPR_like
Motif
Other DBs
NCBI-GeneID:
100082294
NCBI-ProteinID:
XP_028928139
Ensembl:
ENSOANG00000006194
LinkDB
All DBs
Position
9:complement(11738281..11786927)
Genome browser
AA seq
1006 aa
AA seq
DB search
MARGYSSEEAFRQLLFCFRPRLQASIQVTPLLDHLTFLDGEVKDEIKRIAETRGRPRAVE
RLLAALERGDWPPGYRREFVTALRLVGCPLAARYVDPDGGDLPSPAEEAANDLHGQLLTL
LLPSLVERLRPGQVLDRCLQKGLLTPEDRAEVCQAISNHGNPSGTRELLNRIVLKEDWFS
LFVAVLRETEHDDLAESLIGKNVLESTEEAEIKENGVEQPEAEDISTPGFTLTSVSEQLK
SESTNRLNETDSLDSSFSESLASVSDTSLAEGGISCLEESLGRNDTMGSDSDPESVNERG
SPEPELTLRPYQMEVAKLALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKEKASELGKVI
VLVNKVPLVEQHFRKEFQPFLKKWYRVIKLSGDSQLKISFPEVVKSHDVIISTAQILENS
LLNSEEDERVQLSDFSLIIIDECHHTQKEGVYNNIMTRYLTQKMKNKKLMKENQPVVPLP
QILGLTASPGVGKAKKQAKAEEHILRICANLDAFTIKTVKENEALLKSQVKDPCKKIVIA
DYTRYDPFKKKLIDIMTDIQSHCRLYPTSDFGGQQYEQWVVQMEKKAAKEENRTERVCAE
HLRKYNEALQINDTIRMIDAYNHLKNFYKDEKAKKMAAQEDDEQAALILNKTDKYLIDLF
YENKEKLKQLAIDPDHENEKLTKLRNTIIEEFTKADEAAARGIIFTKTRQSACALSQWIS
ENDKFAEIGVKAYYLIGAGHNSEFKPMTQNEQREVINKFRTGKLNLLIATTVAEEGLDIK
ECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAKSGSGVVERESVNVYREKMMYKAIN
RVQNMKPQDYSEKILVFQMQSIMEKKMKIKKNLTKQIKENPALIILSCRNCTKQACAGED
IQVIENMHHVNMTPEFKQLYTTRNNKVLQQKFADYQINGEIICKCGQSWGTMMVHKSLDF
PCLNIKHFVVTFTNNSEKKIYKRWSELPITFPKLNYSEYCMFSDED
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggggctactcgtcggaggaggccttccgccagctgctcttctgcttcaggccg
cggctgcaggcctccatccaggtgaccccgctgctggaccacctgaccttcctggacggc
gaggtcaaggatgagatcaagaggatcgccgagacccgcggccggccccgcgccgtggag
cggctgctggccgccttggagaggggggactggccaccaggttatcgccgggagttcgtc
acggccctgcggttggtgggttgccccctggccgcccgctacgtcgaccccgacggcggc
gatctgccttccccggccgaggaggccgccaacgacctgcacggccagctgctcaccctc
ttgctgccctccctggtggagcgcctgcggcccggacaggtcctggaccggtgcctgcag
aaggggctgctcaccccagaagacagggccgaggtgtgtcaggcaatcagcaatcatgga
aatccgtctggtacaagggaattgctgaataggatagtgctgaaggaagattggttttct
ctgttcgtggcagttctgcgagaaactgagcatgacgatctcgcggagagcttaattggc
aaaaatgtccttgaaagcactgaagaagcagagattaaagaaaatggggtagaacaacca
gaggcagaggacatttcgacccctggattcacccttacttcagtatcagagcagttgaag
tcggagagtactaatcggctcaatgagactgattcgctggactcatctttttcggaatct
ttggcttcagtatcggacacaagtttggcagaaggaggtatcagctgcttagaggaaagc
cttggacgtaatgataccatgggcagtgattcagacccagagagtgtaaacgagagagga
tcgcctgagccggagctgacgctcaggccttaccagatggaagtggccaagctagcactg
gaagggaagaacattattatctgcctccctacaggcagtgggaaaaccagggtggccgtt
tatattgccaaagatcacttggataagaaagagaaagcatcagagcttggaaaagttata
gttcttgtgaataaggtccccctcgtggaacaacacttccgcaaagagttccagccattc
ttgaaaaaatggtatcgcgtcatcaagttaagcggtgattctcagctgaaaatctcattt
ccagaagtggtcaaatctcatgatgtcatcatcagtacagctcaaatcctggagaattcc
cttctgaactcagaggaagatgaacgtgtccaattatccgatttttcactcatcatcatt
gatgaatgtcatcacacccaaaaagaaggtgtctataacaatataatgacccgctatttg
acacaaaagatgaaaaataagaagttgatgaaagaaaatcagccagtggttcctctgcct
caaatcctaggactgacagcctccccaggggtgggcaaagcaaagaagcaagcaaaagct
gaagagcatattttaagaatatgtgccaaccttgatgcatttacaattaagacagttaag
gaaaatgaagcccttctaaaatctcaggtgaaggatccatgcaagaagatagtgattgca
gactacaccagatatgatccttttaaaaagaagcttattgatattatgacagatattcaa
agccattgccgactctatccaacatctgattttggcggccagcagtacgaacaatgggta
gttcaaatggaaaaaaaagctgcaaaggaagaaaaccgtacagagcgtgtgtgtgcggag
catctgagaaagtacaatgaggccctgcaaattaatgacaccattcgaatgatcgatgca
tacaaccatcttaaaaacttctataaggatgaaaaagcaaagaaaatggcagcacaagag
gatgatgaacaggctgctctaatactgaataagacagataaatatctcatagatttattt
tatgaaaacaaagaaaagctgaagcaattggccatagatccagatcatgaaaatgaaaaa
ctgaccaagttgagaaacaccataattgaagaattcaccaaggccgatgaagcggcagcc
cgaggaatcatttttaccaagactcgacagagtgcttgtgccctctctcagtggatctct
gaaaatgacaaatttgcagaaataggagtgaaagcttactacctcattggtgccggccac
aacagtgaatttaaacccatgacccagaatgaacaaagagaagtcattaataagttccgt
actggaaagttaaatctcctcatcgcaaccacagtggctgaggaaggtctggatataaaa
gaatgtaatattgttatccgctatggtctcgttaccaatgaaatagctatggtccaggcc
cgaggacgagctcgtgctgatgaaagcacgtacgtactggtggcgaagagtgggtcagga
gtcgtcgaacgtgaaagtgttaatgtttatcgggagaaaatgatgtataaagccatcaac
cgtgttcagaacatgaagccgcaggattattctgagaagattttggtgttccagatgcaa
agtataatggaaaagaaaatgaaaatcaagaaaaatctaaccaagcaaatcaaagaaaac
ccagcattgataattttgagctgcagaaactgtactaagcaagcctgtgctggagaagac
attcaagttattgaaaatatgcaccatgtcaatatgactccagagtttaagcaactttat
actacaagaaataacaaagtactgcaacaaaaattcgcagattatcaaataaacggggaa
attatctgcaaatgtggacagtcctggggaacaatgatggtgcacaaaagtttagatttc
ccttgtctcaatatcaaacattttgtggtgactttcacgaataattctgaaaagaagata
tataaacgatggagtgaactacctatcacattcccgaagcttaactattcagaatattgt
atgtttagtgatgaagattaa
DBGET
integrated database retrieval system
