Ornithorhynchus anatinus (platypus): 100086863
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Entry
100086863 CDS
T01045
Symbol
PUM1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100086863 (PUM1)
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Motif
Pfam:
PUF
Motif
Other DBs
NCBI-GeneID:
100086863
NCBI-ProteinID:
XP_028936016
Ensembl:
ENSOANG00000004902
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All DBs
Position
16:complement(46094158..46129564)
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AA seq
1262 aa
AA seq
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MSVACVLKRKAALWQDSFSPHLEPLPQQPAHPNMPVVLASGPGAQAQQPPAASQALAAAA
AAAAAAAAAAAAAGTRSSPAPGSGGGAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYSN
SKHRWPTGDSIHAEHQVRSMDELNHDFQALALEGRAMGEQLLPGKKFWETDDSSKDGPKG
IFLGDQWRDSAWGTSDHSVSQPIMVQRRPGQSFHVNSEVNSVLSPRSESGGLGVSMVEYV
LSSSPGDSCLRKGGFGPRDADGDDNDKGEKKSKGTFDGDKLAELKEEGDSMDKANGCLPV
QNGIDGDGKDFSRTPGNCPTSAAEVDLLGPNPGGADGLAQLGGGNGAKPVEDFSAMESQS
VPLDAMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTTAQQ
QQYALAAAHQPHIGMFSAGLAPAAFVPNPYIISAAPPGTDPYTAGLAAAAATLGPAVVPH
QYYGVTPWGVYPASLFQQQAAAAAAAAATNSANQQTTQQTQQGQQQVLRGAASQRPLTPN
QNQQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLG
APVRLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQPQP
SSNLASSSFYGNSSLSNNAQSSSLFSQGSAQPASPSLGFGGSGSLGATLGSALGGFGTAV
ANSSAGSASRRDSLTGSSDLYKRTSGNLTPIGHSFYNGLGFSSSPGPVGMPLPSQAPGHS
QTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSALFPPSR
LRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPA
ERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCR
VIQKALEFVPPDQQVINDMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFK
GQVFALSTHPYGCRVIQRILEHCLPDQTLPVLEELHQHTEQLVQDQYGNYVIQHVLEHGR
PEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCSVNDGPHSALYT
MMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVD
LGPICGPPQRHHLRERGRSPTPAPALLRHHRPRYSSRSADPGTGDTHTQTHTHTPLPLCK
FL
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggcgtgcgtcttgaagcggaaagcagccctctggcaggactccttcagcccc
cacctggagccgctccctcagcaaccagctcatcccaacatgcccgtggtgttggcatct
ggacccggggcccaggcgcagcaaccccccgcggccagccaggccctggccgccgccgcc
gccgccgccgctgccgccgccgccgccgccgccgccgcggggacccgctccagccccgcg
cccggctccggcggcggcgccggacgctcccaggacgacgctatggtggattacttcttc
cagaggcagcacggggagcagctcggcggagggggcagcggcggaggcggctacagtaac
agcaaacatcgctggcccaccggggacagcatccacgccgagcaccaggtgcgctccatg
gacgagctgaatcatgatttccaagcacttgctctggagggtcgagctatgggcgagcag
ctcttgccagggaaaaagttttgggaaacagatgattccagcaaagacggaccaaagggg
atattcttgggtgaccagtggcgagacagtgcctggggaacgtcagaccactccgtctcc
cagccgatcatggtgcagcgccggcccggccagagcttccatgtcaacagcgaggtcaac
tcggtactgtcaccgcggtcggagagcgggggcttgggcgtcagtatggtggagtacgtc
ctgagttcttcccctggggactcctgcctcaggaaaggcggatttggcccacgggatgca
gatggcgacgacaacgacaaaggggagaagaagagcaaaggcacctttgacggggacaag
ctggcagagctgaaggaggagggggacagcatggacaaggccaatgggtgcttacccgtg
cagaatggaattgatggggatggcaaagacttcagtcggacccccgggaactgcccgacg
tcagccgccgaggtggatctcctgggcccaaaccccggcggagccgacggcctggcccag
ctgggcggcggcaacggggccaagcccgtggaggacttctcggccatggaatcccagagc
gtgccgctggacgccatggagcacgtgggcatggagcccctccagttcgactactccggc
acacaggtgcccgtcgactcggccgcggccaccgtggggctgttcgactacaactcccag
cagcagctgttccagaggccaaatgcgcttgcggtccagcaactgaccacggcccagcaa
cagcagtatgcgctggccgctgctcaccaaccacacatcggtatgttttcagcaggtctg
gctcccgccgcctttgtccccaacccctacatcatcagcgccgcacccccggggacggac
ccctacacggccggactggcggccgctgcggccactctcggccccgcggtggtcccccac
cagtactacggagtcaccccctggggcgtctacccagccagtctcttccagcagcaggcg
gccgctgccgccgcggccgccgccaccaactcggccaatcagcagacgacgcagcagacc
cagcaaggccagcaacaggtgctgcggggagcggccagccagcggcccttgaccccaaac
cagaaccagcagggacagcagacggaccccctcgtggcagccgcagccgtcaactccgcg
ttggccttcggacaggggctggcggccgggatgccgggctacccagtcctggcgcctgcc
gcatattacgaccagacgggcgccctggtggtgaacgcgggagcccgcaacggcctgggc
gcgcccgtccgcctcgtggctcccgcccccgtcatcatcagctcctcggctgcccaagca
gcggtcgcggcggccgcagcttcggccaacggcgcagcggggggcctcgcgggcacgacg
aacgggccgttccgccctttgggcacgcagcagccgcagccgcaaccccagccacagccc
agcagcaacctggcgtccagctccttctacggcaacagttcgctgagcaacaacgcccag
agcagctccctgttctcccagggctcggcccagcctgccagcccctccctgggcttcggg
ggcagcggctctctgggtgccaccctgggctctgccctcggtgggtttggcacagcagtc
gccaactccagtgccggcagcgcctcccgccgtgactctctgacgggcagcagcgacctg
tacaagcgcacctctggcaacctcacccccatcggacacagcttctacaacggcctgggc
ttctcctcgtctccgggcccagtgggcatgcccctgcccagccaggccccgggacactcc
cagacgccgcccccatccctctcttcgcacgggtcctcgtccagtctaaacctgggcgga
ctgaccaacggcagcgggaggtacatttcggcggcacccggggccgaggccaagtaccgc
agcgccagcagcgcctccagcctgttcagcccgagcagcgccctgttcccgccgtcccgc
ctgcgctacggcatgtccgacgtcatgccgtccggccgcagccgcctcctggaggatttc
cgcaacaaccgctaccccaacttgcagctgcgcgagatcgccggccacatcatggagttc
tcccaggaccagcacggatccagattcatccagctgaaactggagcgggcgaccccagct
gagcgccagctggtcttcagcgagatcctgcaggcggcctaccagctcatggtggatgtg
tttgggaactatgtcatccagaagttttttgaatttgggagcctggagcagaagctggcg
ctggcagagcggatccggggacacgtactgtccctggcgctgcagatgtacggctgccgc
gtcatccagaaggcgctggagttcgtcccccctgaccagcaggtaattaacgacatggtg
cgggagctggacggccacgtcctcaagtgcgtcaaggaccagaacggaaaccacgtggtg
cagaagtgcatcgagtgtgtccagccacagtccctgcagttcatcatcgacgccttcaag
ggccaggtgttcgcgctgtccacgcacccgtacggctgccgcgtgatccagaggatcctg
gagcattgcctccccgaccagacgctgcctgtcctggaggagctgcaccagcacacggag
cagctcgtgcaggaccagtacggaaactacgtcatccagcacgtactggagcacgggcgt
ccagaggataagagcaagattgtagctgaaatccggggcaacgttcttgtattgagtcag
cacaagtttgccagcaatgtggtggagaagtgtgtgacccacgcatcgcgcaccgagcgc
gccatgctgatcgacgaggtgtgcagcgtgaacgatgggccgcacagcgcgctctacacc
atgatgaaggaccagtatgccaactacgtcgtgcagaaaatgatcgacgtggccgagccc
gcccagcgcaagatcgtcatgcacaagatccggccacatatcgccacgctgcgcaaatac
acgtacgggaagcacatcctggccaagctggagaagtactacatgaagaacggggtggac
ctgggacccatctgcggccccccccaacggcatcatctgagagaacgggggcgctcgcct
acccccgcccctgccctcctccgccaccaccgcccccgatattccagcaggtccgcggat
ccgggaaccggagacacacacacacagacacacacacacacccctctccccctttgtaaa
ttcctttaa
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