Oscillatoria acuminata: Oscil6304_0695
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Entry
Oscil6304_0695 CDS
T02368
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
oac
Oscillatoria acuminata
Pathway
oac03410
Base excision repair
oac03430
Mismatch repair
oac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Oscil6304_0695
03430 Mismatch repair
Oscil6304_0695
03440 Homologous recombination
Oscil6304_0695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oac03400
]
Oscil6304_0695
DNA repair and recombination proteins [BR:
oac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Oscil6304_0695
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Oscil6304_0695
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Oscil6304_0695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AFY80434
UniProt:
K9TEI9
LinkDB
All DBs
Position
865059..867518
Genome browser
AA seq
819 aa
AA seq
DB search
MNQQPVTWHLQQPVLPPEWFLEQVRQHLNSNSSGLSGQYAAALLWQRGIQDREELARFLN
PQDYQPASPFDFGEEMSAGVDRLKLARTQGEKVAIWGDFDADGITATSVLWDGLGQFFTP
NSQLTYFIPNRLTQSHGLNRSGINDLAASGTTLIVTCDTGSTNLDEIEYAHELGIDIIVT
DHHTLPPSRPRVAAIINPRSLPATHPLAHLSGVAVAYKVVEALYSTLPEIPQEPLEGLLD
LVAIGLIADLVQLSGDCRYLAQMGLKRLHQEWQKSPMERRRPGVGELLDLCKRSGDRPTD
ISFGIGPRINAVSRIHGDASFCVELLTTRDRRHAQKLAQDTELANSRRQAIQAEVDKQVQ
QKLDRLDLSTTGVIVLQDPQWPAGVLGLVAGKVAQEYARPTILLSTDSGNSEAETPQKTQ
LFSDSSDAASLTLARGSARSVQNIDLYELVKEQEHLLHRFGGHPFAAGLSLPVQNVPLFT
EAINRLLKEKMGAVGGLGIPVIQADLRCTVIELGLNLFKELKILEPCGMGNRVPLLLIEN
CQFKNVWNAKVKDKKGRKIEYIKTEFQIWDESSETGFPGLWWGHYKEELPTVPCDAVVEL
DHNSFKKRYEVRLIAVRPRKAGTVVTSPEGGLPILDFRSNLIQKGEEKKDELDSSEGLNL
DRTTSIVLETCPSSWEELHQWLDLAIQTQKTLTIAYPPPKPVSPLQVWYQLVGVAKYLSR
TGQRATRGQVCSKLSISDRTLEIGIQALIAAGFQVKTMGESLQVISGPLTHPLGVGDRFS
AAVEEEQFRRTYFYQVPLSTVQAIGRGRGDGEDGEDLQK
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcaacccgtcacctggcatctgcaacaacccgtactccctccggagtggttc
ctcgaacaagtccgacagcatctcaactccaactcctcgggtttatccggccaatatgcc
gcagcattactctggcaacggggaattcaggaccgagaggaactagcccggtttttaaat
ccgcaagactatcaacccgccagtccctttgacttcggcgaggagatgtccgctggtgtc
gatcgcctcaaactggcccgaacacagggggaaaaagtggccatctggggagactttgat
gccgatggaatcaccgccaccagtgtcttatgggacggcctgggccaatttttcaccccc
aacagccaactcacctacttcattcccaaccgcttaacccaatctcacggtctgaatcgg
tcaggaattaacgatttagcggcatcgggaacgacgttaattgttacctgtgataccggc
agtaccaatttggacgaaatcgagtatgctcatgaacttggcatcgatatcatcgtcacg
gatcatcatactttaccccctagtcgcccaagagttgccgcaattatcaacccccgttct
cttccggcaacccatcccctagcgcatctttcgggcgtcgctgttgcttataaggtggta
gaagcgctgtatagcacactgccggaaattccgcaagaacccttagaaggattattggat
ttagtcgccattgggttaattgccgacttggtacaactgagtggagactgtcgatattta
gcccaaatgggactcaaacgcctgcatcaggagtggcagaaatctccgatggaacgacgc
agacccggggtgggggagttgttggatttgtgcaaacgcagtggcgatcgcccgacggat
atttcctttggcattggtccgcgcattaatgccgtcagtcggattcatggggatgcctcc
ttttgtgtggaattgctcaccactcgcgatcggcgtcacgcccaaaaactcgcccaagat
accgaactcgccaactctcgacgtcaagcgatccaagcagaggtcgataaacaggtccaa
caaaaactcgatcgcctcgacctctctaccaccggagtaatcgtcttacaagaccctcaa
tggcctgccggagtcctcggtttagtcgccggtaaagttgcccaagagtacgcccgtccc
accattttgttaagtaccgattccggcaattctgaggcagaaacccctcagaaaactcag
cttttcagtgattcatccgatgccgcctccttgactcttgcccgagggtcagcgcgttcc
gtccaaaatattgatttgtatgaattagtcaaagaacaagagcatttactgcaccgtttc
ggcggtcatccctttgccgctgggttaagtttacccgtccaaaatgttcccctctttacc
gaagcgattaaccgattgctaaaggagaaaatgggggcagtgggaggcttgggaatacca
gttattcaagcggatttacgctgtactgtaatcgagttgggtttaaatctatttaaagaa
ttaaaaatactagaaccttgtggaatgggcaatcgagtaccgttgctgttgattgaaaat
tgtcaatttaaaaatgtgtggaatgctaaagtcaaggataaaaagggtcggaaaatagaa
tatattaaaaccgagtttcagatttgggatgaatccagcgaaactgggtttcccggcttg
tggtggggacattataaagaggaattaccgactgttccttgtgatgccgtggtggaactg
gaccacaacagttttaaaaaacgctatgaagtgcgcttgattgcagtccgtccccgaaaa
gcggggaccgtggtcacatctccggaagggggattacctattctggattttcgtagcaac
ctgatccaaaagggagaagagaagaaggatgagttagacagttctgaggggttgaatctc
gatcgcaccacttcaattgtgctagaaacttgtcctagtagttgggaggagttgcaccag
tggttagatttagcaatccagactcaaaagacactgacgatcgcctatcccccgcccaaa
cctgtttctcccttacaagtttggtaccagttggtgggggtggcgaaatatctcagccga
accggacaacgcgcaacccggggacaagtctgttctaaactatcgattagcgatcgcacc
ttagaaatcggcatccaagccttaatcgccgcaggttttcaagtcaagacaatgggagag
agtttgcaggttatttccggacccttaacccatcctctcggcgttggcgatcgcttttct
gccgcagttgaggaggaacagtttcggcgcacctatttttatcaagttcccctgtctacc
gtccaggcgatcgggcgtggtaggggggatggggaggatggggaggacttacaaaaatag
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