Oreochromis aureus (blue tilapia): 116320324
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Entry
116320324 CDS
T07295
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04137
Mitophagy - animal
oau04140
Autophagy - animal
oau04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116320324 (hif1al)
04137 Mitophagy - animal
116320324 (hif1al)
04148 Efferocytosis
116320324 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116320324 (hif1al)
Transcription factors [BR:
oau03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116320324 (hif1al)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HIF-1
PAS_9
PAS_4
CENP-B_dimeris
DUF3446
Motif
Other DBs
NCBI-GeneID:
116320324
NCBI-ProteinID:
XP_039454027
Ensembl:
ENSOABG00000025271
LinkDB
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Position
LG14:5241207..5268965
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AA seq
683 aa
AA seq
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MEKKEGVVAVKRTSSEQRKLRSRDAARCRRSQETEVFYELAHTLPLPRRVSTHLDKAAIM
RVTLSFLRMHHLLRSDKNLKEEPKEEEVEAEEEEEEEEKDEDPMDAFYPQALAGFIMVMT
EEGDMIYLTENVNKHIGITQLELLGQSIYDFVHPCDQEELRDLLTPRPGLSKKSRTEQTS
ERNFFVRMKSTLTTRGRTVNIKSATWKVLHCTGQIRPFGSGSASPPAGRVMTLLCEPIPH
PSSVEFPLDTCTFLTRHSMDLRFTHCEGRVAELVGYKPDDLIGRSGFEFLHALDSDHINK
SLHTLLSKGQVSTSQYRFLANNGGYVWAETQATVLYNSKTSQPDAIVCLNFILSSVEQPD
VIFSMEQTRCSRVPKIEPADEDSGTADIRESETDSEPRTVSTEAEDVDSDSSSSAKLFME
LREKPEELLQLAPDAGDTIVPLSPGSVELSFASPPSPDSVPEHPQDLCTPQLRKLLAPIF
DPITPPPSASSSSSSPSPSSSPEPEQSRSEEEVMDTSEVEKFFAFWPEDAQKKDTLVEME
GMDLDMLAPYISMDDDFQLTFLSSMTEEAEKPSSSESSATSRKRTHDSAEEMLSTVMLQD
KRPKKDPSIEEELLLTHKLLDSLDETDQPDLIMDPVPESRSHLLTDRDPVLGGMQGLCDT
AALMKDIFVSRPTLLSPPLSPMT
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaggagggggtcgttgcggtcaaacggaccagctcagaacagagaaaactg
cgctctcgtgatgcggccagatgcaggcggagtcaggagaccgaggtcttttatgagctc
gcccacactctgcctctcccacgccgagtgtccacccacctggacaaagccgccatcatg
agagtgaccctcagcttcctgcgaatgcaccacctgcttcgatcagataagaatctgaaa
gaagagcctaaagaggaggaagtggaggcggaggaggaggaggaggaggaggagaaggat
gaagatccgatggatgctttctatcctcaggcgctggctggcttcatcatggtgatgacc
gaggagggagatatgatctacctgacagagaatgtcaacaaacacattggcatcacacag
ctggagctgctgggtcagagcatctatgactttgttcatccctgcgatcaagaggagctc
agagacctgctgactccacgtccaggtctgagtaagaaatcacggacagaacagacgagc
gagagaaacttctttgtgcgaatgaagagcacactgaccaccagggggcgcactgtcaac
atcaaatctgccacctggaaggtcctccactgcacaggccaaattcgtccctttggcagc
ggctctgcgtcgccccctgcaggcagagtcatgaccctgctgtgtgagcccatcccacac
ccatccagcgtggagttccctctggatacttgcaccttcctcacccgtcacagcatggac
ctgcgcttcacccactgcgagggcagggttgcagagctggtgggatacaaacctgatgat
ttgattggacgctcaggcttcgagtttcttcacgcgctcgactcggatcacatcaacaag
agcctgcacacattgctctccaaaggtcaggtcagcaccagccagtaccgtttcctggca
aacaacggcggctacgtgtgggcggagactcaggccacagtgctgtacaacagtaaaact
tcccagccggacgccatcgtctgcctcaacttcatcctcagctctgtggagcagccggat
gtgattttctccatggagcagacccgctgtagtcgcgtgcctaaaattgaaccggcagat
gaggactccgggactgccgacatacgcgagtctgaaactgacagtgagcctcgcactgtt
tccactgaggctgaagatgtggattcagattccagcagcagcgcgaagctcttcatggag
ctgcgggagaagccggaggagctgctgcaattggctcctgatgctggagacaccatcgta
cctctgagtccaggttctgtcgagctctcatttgccagtccacccagtccagattctgtg
cccgagcaccctcaggatctgtgcaccccgcagctgagaaagctcctcgcacccatcttt
gaccccatcactcctcctccatctgcatcctcatcctcttcttcaccatcgccgagctcc
tcacctgaacccgagcagagccgcagtgaagaggaggtgatggacaccagcgaggtggaa
aagttcttcgccttttggccagaagatgcccagaagaaagataccctggtggagatggag
gggatggacctggacatgttggctccgtacatctccatggatgatgacttccagctgacc
ttcctcagcagtatgaccgaggaagctgagaaaccttcgtcatccgaaagttcagcaaca
agcaggaaacggacccatgactctgctgaagagatgttgtcaacagtgatgcttcaggac
aagagaccgaaaaaggatccttccatagaggaggagcttcttctcacccacaaactactg
gacagtctggatgaaaccgaccaaccagatctgatcatggacccggtgccggagagtcgc
agccatctgctcacagacagagatccggtcttaggaggcatgcaaggactgtgtgacacc
gcagctctgatgaaggacatatttgtatctcgcccgactctcctctcgccacctctctca
cctatgacctaa
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