Oreochromis aureus (blue tilapia): 116321004
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Entry
116321004 CDS
T07295
Symbol
scn1lab
Name
(RefSeq) sodium channel, voltage-gated, type I like, alpha b isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oau04040
]
116321004 (scn1lab)
Ion channels [BR:
oau04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
116321004 (scn1lab)
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
ATP-synt_B
GPHH
Spem1
IQ
Motif
Other DBs
NCBI-GeneID:
116321004
NCBI-ProteinID:
XP_039463113
Ensembl:
ENSOABG00000018528
LinkDB
All DBs
Position
LG23:4826724..4869852
Genome browser
AA seq
2017 aa
AA seq
DB search
MAQLLIPPGPDSFRPFVPESLAAIERRIAEEEARRPRVERRSDSDDENGPKPNSDVEAGK
SLPFIYGDIPPGLVSTPLEDIDPYYSNQKTFIVLNRGKAIFRFNATPALYILSPFNPLRR
IAIKVLVHSMFSILIMFTILTNCAFMTLSNPPDWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFSVILMAYVTEFVDVGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRIPLGSNTTLNNTHESNNTLV
KNVTFLENITKNSLDWIEYINDERNYYYLPGRRDALLCGNGSGAGVCPEGFSCIKAGRNP
DYGYTSFDTFSWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLVNLI
LAVVAMAYDEQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQVAAAAATESGEYSGRGGPT
SESSSGTSKLSSKSAKERRNRRKKRKQREEEEERGCRDKFHKSESEDSIKRSSFRFSIDA
NRLSYEKRCSSPNQSLLSIRGSIFSPRRNSRASLFSFRGRARDMGSENDFADDEHSTFEE
SDSRRGSLFLPRRLERRCSAVSQTSLGAPRIMLPANGKMHCAVDCNGVVSLVGGTSVTTS
PVGLLLPEGTTTDTELKKRRSGFHQPSMDYLNEPGGRQRAMSVASILTNTMEELEESRQK
CPPCWYRFANTCLIWDCCPAWLKIKEIVSMVVMDPFVDLAITICIVLNTLFMAMEHYPMT
KEFDNVLSVGNLVFTGIFTAEMCFKIIALDPYYYFQEGWNIFDGIIVSLSLMELGLANVE
GLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFG
KNYKECVCKISEDCTLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLIVFM
MVMVIGNLVVLNLFLALLLSSFSADNLAATDEDSEMNNLQIAVGRIQRGIAFVKNSMRQF
LQSLCFGRGGKGSGLAEESKPLDELHSNGKGNCISNHTTVEITKDPSGVYMREGNGRPGG
LVVGVSVGGDSTGKYPVEDCDYMSFIHNPSLTVTVPIAVGESDFENLNTEDFSSDSSDVE
GSKEKLDAEPQPLSSSEGSTVDIRPPGDGVDSVELEPEESLDPEACFTEGCVRRFQCCQI
SEEGDKFKSWWTLRKTCFIIVEHNWFESFIIFMILLSSGALAFEDIYIEQRRTIKTVLEY
ADKVFTYVFILEMLLKWVAYGFVKYFTNAWCWLDFLIVDVSLVSLVANALGYSELSAIKS
LRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYY
HCVNATTDEPFPIEVVNNKSDCLSLNDSARWKNVKINFDNVGAGYLALLQVATFKGWMDI
MYAAVDSRNLEEQPDYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQD
IFMTEEQKKYYNAMKKLGSKKPQKPIPRPTNAFQGCVFDFITKQAFDIVIMILICLNMVT
MMVETDDQTKEMDRILYWINLVFIVLFTGECVLKMISLRHYYFTIGWNIFDFVVVILSIV
GMFLSEVIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLL
FLVMFIYAIFGMSNFAYVKREAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNKR
EPDCESQLEHPGNSYKGNCGNPSVGIFFFVSYIIICFLIVVNMYIAVILENFSVATEESA
EPLSEDDFEMFYEVWERFDPDATQFVEYSKLSDFADALDPPLRIPKPNMIQLISMDLPMV
SGERIHCLDILFAFTKRVLGEGGEMDMLRGQMEDRFMASNPSKVSYEPITTTLRRKQEEM
SAIIIQRAFRRYMIRLAMKKASALYKEQLKEGIHDPDKDVMVISKFNENSTSEKMDMTPS
TASPPSYNSVTKSDKDKYEKENRERENKAKDLKDRKK
NT seq
6054 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttataccgcccggacctgacagcttccgccccttcgtccccgagtcg
ctggccgccattgaaaggcgcatcgccgaggaggaggcccggagaccacgggtggagcgc
cgcagtgacagcgacgatgaaaatgggcccaagcccaacagcgatgtggaggcggggaaa
tctctccccttcatttatggggacatcccccccggcctggtctccacccctctggaggac
attgacccctactatagcaatcagaagaccttcatagtattgaatcgtgggaaggcaatc
ttccgtttcaatgccactcctgctttgtacatcctaagtcccttcaatcctctgaggagg
atagctattaaagttttagtgcactcgatgttcagcatattgatcatgttcacgatcctg
accaactgtgctttcatgaccctcagtaatcccccggattgggccaagaatgtagagtac
acatttacggggatttacacctttgagtcccttataaagatcctggccaggggcttctgt
gtggggaagttcactttcttgcgagacccatggaactggctggacttcagtgttatcctc
atggcatatgtcacagagtttgtggacgtgggcaatgtctcagcactgcgaaccttcagg
gttctgcgagccctgaaaactatatcagtcatcccaggtttgaagaccattgttggtgca
ctgatccagtcagtgaaaaagctgtcagatgtgatgatcctcaccgtgttctgtctcagt
gtctttgcccttatcggcctccagctcttcatgggcaacctgaggcagaagtgcgtgcgc
attcctttgggcagcaacacaactttgaacaacacacatgaaagcaacaacacactggtg
aagaacgtcacattcctggagaacatcacaaaaaactccctcgactggatagagtacatc
aacgatgagagaaattactattacctccctggccgtagggatgctctgctctgtggaaat
ggcagtggtgctggggtctgcccagagggcttttcatgtataaaagcaggtcgcaatcca
gactacggctacaccagctttgacaccttcagctgggccttcctttccttgttccgcctc
atgacccaggactactgggaaaacctctaccagcagactttgcgtgcagcagggaagccc
tacatgatcttctttgtgctggtgatcttcctgggatctttttacctggtcaacctgatc
ttggctgtggtagccatggcttatgacgagcaaaaccaggccaccatcgaggaggcccag
cagaaagaggaggagttccaggctatgctggagcagctgaagagacagcaggaggaggca
caggttgccgcggcagcagccacagagagcggcgaatacagcgggagaggaggccctacc
tccgagtcctcctcagggacatctaagctcagctcgaaaagcgccaaagagcgacgcaac
aggcggaagaagaggaagcagagggaggaagaggaggagagggggtgccgtgacaagttc
cacaaatctgagtctgaggacagcatcaagaggtccagcttccgcttctctattgatgcc
aacaggctttcttatgagaagagatgctcttcacccaaccagtctcttctcagtatccgt
ggctcaatcttctcacctcggaggaacagccgcgccagccttttcagcttccgtggccgt
gcacgagacatgggctccgagaacgactttgcggatgatgagcacagcacctttgaggag
agcgacagtcgccggggttccttgttcttgccccgccgcctcgagcgccggtgcagtgct
gttagccagaccagcctcggagcacctcggataatgctgcccgccaatggcaagatgcac
tgcgcagtagactgcaacggtgtggtgtcactggttggtggaacttctgtaacaacctct
cctgtaggtctcctgctgcctgaggggacaactacagatactgagcttaagaaacggcgg
tcgggtttccaccagccatctatggattatttaaatgaaccaggtggccgacagagagcc
atgagtgtggccagtatcctcaccaacaccatggaagaacttgaagagtcgagacaaaaa
tgccctccttgctggtatagatttgccaacacctgcctgatctgggattgttgtcctgca
tggctgaaaatcaaagagattgtcagcatggtggtcatggatccatttgtggatctagca
atcacaatttgcatagtcctcaacacacttttcatggccatggagcattaccccatgacg
aaagaatttgataatgtcctctctgtgggaaacctggtgtttacgggcatcttcacagca
gagatgtgctttaagattatcgctctggatccctactattacttccaggagggctggaac
atctttgatggcattattgttagtctcagcctgatggagcttggcttggctaacgttgaa
gggctgtctgtactcaggtccttcagattgctgagagtcttcaaactagccaagtcttgg
cccactttgaacatgctcatcaagatcatcggtaactctgtgggtgctctgggaaatttg
actctggtgctggccatcatcgtgttcatcttcgctgtggtgggcatgcagctgtttggc
aaaaactacaaggagtgtgtgtgtaagatttcagaggactgcacgttgccccgctggcac
atgcacgatttcttccactccttccttatcgtgttccgggtgctgtgcggagagtggata
gagaccatgtgggactgcatggaggtggcaggacagactatgtgtcttatcgtcttcatg
atggtcatggtcattggaaacctggtggttctaaatctcttcctggctctcctactgagt
tcattcagtgccgacaacctggcagcaaccgatgaggacagcgagatgaacaacctgcaa
attgctgtgggcaggatccagcggggcatcgcatttgtcaaaaactcaatgcggcagttc
ctccagagcttgtgctttggcagaggcggaaagggctctggtctagctgaggaaagcaaa
cccctggatgaactgcacagcaatggcaagggcaactgcatttccaatcacacaacagtg
gaaatcaccaaagaccccagtggggtgtacatgagggagggcaacggacgaccaggaggg
ctggtggttggggtcagtgtaggaggggacagtacgggaaaatacccagttgaggactgt
gactacatgtcatttattcataaccccagtctgacagtcacggtgcctattgctgtgggc
gagtcagactttgagaacctaaacacagaagatttcagtagcgactcatctgacgtggag
ggcagcaaagagaagctcgacgcagagccccagccactgagctcatcggaggggagcaca
gtcgatatccgcccccccggagatggggttgattcagtggagctggaaccagaggagtca
ctggacccagaagcctgctttacagagggctgtgtgcgcaggttccagtgctgccagatc
agtgaggagggagacaagtttaagagctggtggacactcaggaagacctgctttatcata
gtagagcacaactggtttgaatccttcatcatattcatgattctgctgagcagtggagca
ctggcgtttgaggacatttacatcgagcagcggcggaccatcaaaaccgtgctagagtac
gcagacaaggtcttcacttacgtcttcatccttgaaatgctgttaaagtgggtggcatat
ggctttgtcaagtacttcaccaatgcctggtgctggctggacttcttaattgtagacgtg
tccttggtcagcctggtagcaaatgctctgggctactctgagcttagcgccatcaaatct
ctgaggacactgcgagctctacggcccctgagggccctgtctcggtttgagggcatgagg
gttgtggtgaatgcattgctgggagccatcccctccatcatgaatgtgctgctggtctgc
ctcatattttggctcatcttcagcatcatgggtgtcaacctgtttgcgggcaagtactac
cactgcgtcaatgccaccacggatgagcccttccctatcgaagtcgtcaacaacaagtct
gactgcctgagcttgaatgacagtgcccgctggaagaatgttaaaatcaactttgacaat
gtgggagccggctatctggctctgttgcaagtggcaacatttaagggttggatggacatc
atgtatgcagctgtggactctcgtaatttggaagaacagcctgattacgaagtaaacttg
tacatgtacctctatttcgtcatcttcatcatctttggctccttcttcacactcaacctt
ttcattggtgtcatcatcgacaacttcaatcagcagaagaaaaagttgggaggtcaggac
atcttcatgactgaagagcagaagaaatactacaacgccatgaagaagctggggtccaag
aagccgcagaaacctatacctcgaccaacaaatgcatttcaaggctgcgtcttcgacttc
atcacaaagcaggcctttgacatcgtgatcatgatcctcatctgccttaacatggtgacc
atgatggtagagacggatgaccagacgaaagagatggaccgaatcctgtactggattaat
ctggtcttcattgtgctcttcactggggagtgtgtgctcaagatgatttcactgcgtcac
tattacttcaccattggctggaatatttttgactttgtggtggtgatcctttcgattgta
ggcatgtttttatctgaagttatcgagaagtactttgtgtccccaacactgttccgagtg
atccgattggccaggataggccgaatcctccgccttatcaaaggtgccaagggcatccgg
acgcttctctttgccttgatgatgtcactccctgccctgttcaacattggcctcctcctc
tttcttgttatgtttatctatgccatttttggcatgtccaactttgcttatgtcaagcgg
gaggcaggaatcgatgacatgttcaatttcgagacctttgggaacagtatgatctgtttg
tttcagattaccacctcagctgggtgggatggcctgctggcacccatacttaacaagagg
gagcctgactgtgagagccagctggagcacccaggcaactcctacaaaggcaattgcggc
aatccatcagtaggcatcttcttctttgtcagctacatcatcatctgctttctcattgtg
gtcaacatgtacattgctgtcatcctggaaaactttagtgtggccaccgaggaaagcgcc
gagccattgagcgaggatgactttgagatgttctatgaagtgtgggagcgctttgatcct
gatgctacgcagtttgtggagtacagcaaactctctgactttgcagatgctctggatcca
cctctacgcatacccaagcctaacatgattcagctcatctccatggacctgcccatggtg
agcggtgagcgcatccactgcctcgacattctgtttgccttcactaaaagagttttgggt
gaaggcggtgaaatggacatgttgcgcggacagatggaggaccgctttatggcctccaac
ccctctaaggtgtcttacgagcccatcaccaccaccttgcgccgcaaacaggaggaaatg
tctgccataatcatccagagagccttccggcgctacatgatccgcctggccatgaagaag
gcctcagccctctacaaggagcagttgaaggagggcatccacgaccctgacaaggatgtg
atggtcatcagcaagttcaatgagaactccacgtcagagaaaatggacatgaccccctcc
acagcctccccgccatcatataacagtgtgacaaagtcagataaggacaaatacgaaaaa
gaaaatagggaaagagaaaataaagcaaaagacttgaaagaccgaaagaaatag
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integrated database retrieval system
