KEGG   Oreochromis aureus (blue tilapia): 116321034
Entry
116321034         CDS       T07295                                 
Symbol
sf3b6
Name
(RefSeq) splicing factor 3B subunit 6
  KO
K12833  pre-mRNA branch site protein p14
Organism
oau  Oreochromis aureus (blue tilapia)
Pathway
oau03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116321034 (sf3b6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oau03041]
    116321034 (sf3b6)
Spliceosome [BR:oau03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    116321034 (sf3b6)
 Complex B
    116321034 (sf3b6)
 Complex C
   U2 SnRNP specific factors
    116321034 (sf3b6)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 116321034
NCBI-ProteinID: XP_031596641
Ensembl: ENSOABG00000020736
LinkDB
Position
LG15:complement(1170461..1174032)
AA seq 125 aa
MAMQAAKRANIRLPPEVNRILYVRNLPYKITAEEMYDIFGKYGPIRQIRTGNTPETRGTA
YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN
TDPPK
NT seq 378 nt   +upstreamnt  +downstreamnt
atggctatgcaagcagcaaaacgcgctaatatccgattacctcctgaggtgaacagaatc
ctgtatgtccggaatcttccttataagatcacagcagaggaaatgtatgatatctttggg
aaatatggaccaatacgacaaatcagaacagggaacacgcctgaaacaagaggaacagct
tatgtcgtatatgaagacatctttgatgccaagaacgcctgtgaccacctgtcaggcttc
aatgtctgcaatcgttacctcgtggtcctctactacaacgcaaacagagctttccagaaa
atggacacaaaaaagaaagaagaacagctgaagttgctaaaagagaaatacggcatcaac
acagaccctccaaagtag

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