Oreochromis aureus (blue tilapia): 116322947
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Entry
116322947 CDS
T07295
Symbol
ifih1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1 isoform X1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04622
RIG-I-like receptor signaling pathway
oau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
116322947 (ifih1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116322947 (ifih1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oau04054
]
116322947 (ifih1)
Enzymes [BR:
oau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116322947 (ifih1)
Pattern recognition receptors [BR:
oau04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
116322947 (ifih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
Helicase_C
DEAD
ResIII
CARD
SWI2_SNF2
AAA_22
C1_4
DUF3638
TFIIS_C
Motif
Other DBs
NCBI-GeneID:
116322947
NCBI-ProteinID:
XP_031599038
Ensembl:
ENSOABG00000020715
LinkDB
All DBs
Position
LG16:complement(15456002..15470124)
Genome browser
AA seq
1036 aa
AA seq
DB search
MESETDEMRESLIDCLRPRLKELIVVDRVLDLIDFIENEQKERIRQKARNDGDISAADSL
INAVVQKPHTPGWFTAFVDALNNGGCKFAADYIQLNLPTPEVEAENENCVRFIHLLIPSL
ADMGTDQVCADCFSKGLLTIDERDRIMAEIVNRGSRSGARELLRRIIKCPPGWYSTFLQI
LKDTEHHVLYNELTGNEDKKPSLKDKPKATTGESPASAESCDGTESMEITVNEQTMDQST
DLYAGNELPSNSEPSQPGSDKKPSLKDKPKATTGESPASAESCDGTESREITVNEQPMDQ
STDLYAGNELPSNSEPSQPDGSALEVARSPEKEIILRDYQMEVAGPALEGKNIIVCLPTG
SGKTRVAVYITKEHLDRRKAEGKPRKVIVLVNKVPLVEQHYSAEFLPFLKNKYKVERVSG
DSQLKISFTEIVKKNDIIICTAQILENYLERANGGEDEGVNLSDLTLIIIDECHHTQKGG
VYNHIMMRYLKQKHKNKRLIKEQKEPVPLPQILGLTASPGVGGATKMEKAEEHILRICAN
LDASRIMTRSHEEFKKEQRKIIVSVEDRREDPFGDVIKKIMTAIHNHAELTPTCDLGSQN
YEQWVVQKERQAAKDENQKVRVCAEHLRQYSESLNLSNTIRMQDAFSFLNKYYEEEMKKK
TAPEEEHKIQITDTERFLFNLFKDNKKELETLAKNPEYENDSLSKLRTKILHEFSSRDEA
RGIVFIKTRRSAIALNQWIQENPKFADIGVKSAYVIGGGDQSVVKPMTSAEQKDVLKKFG
NGQVNLLIATTVAEEGLDIPACNFVIRYGLVTNEIAMIQAQGRGRAEDSSYTLVEVKNSG
VAEKECVNEYRKNMMNKAIQKIKLLNQAAYEKRITEFQIQAIMEEKVRMTKKKQKDIKNE
SPSNVKFSCRSCSEPICTGDDIQIIENMHRVNVTSQFRKLYIQRENTTLQERLLDYETNG
FIACKNCGQRWGSMMMYKGIDCPCLDVKNFVVNLNGKKISKCTKWNEVPIKFSAFDYAEH
ASNMTMSDNSDDDETM
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgaaacggatgaaatgcgcgagtccctgatcgactgcttgaggccgaggctg
aaggagcttattgtggtggatcgggtcctggatcttatagactttatcgaaaacgagcaa
aaggaacggatcagacagaaggccagaaacgatggtgatatttcggctgcggactccctt
attaacgcagtagttcagaagccacatactcccggatggttcactgcgttcgttgacgca
ctgaataacgggggctgtaaattcgcagctgactacatccagttaaatctcccaactccc
gaagttgaggcagagaatgaaaactgtgtccggtttattcacttacttattcccagcctt
gcagacatgggtacagaccaagtgtgtgcagactgtttcagtaaaggactgctcaccata
gatgagcgcgacagaattatggctgaaatagtcaacaggggatccaggagtggagcaagg
gaacttttaagaagaattatcaaatgtccaccaggatggtattcaacatttcttcaaatt
cttaaagacactgaacaccatgtgctctataatgagttgactggcaacgaagataagaaa
ccatcactgaaagacaaacctaaagctacaacaggggagagtccagcatcagctgaaagt
tgtgatggcactgaatccatggagatcaccgtgaacgaacagactatggatcaatccaca
gacttgtatgcaggcaatgaactgcccagcaactcggagccctcacagccaggatcagat
aagaaaccatcactgaaagacaaacctaaagctacaacaggggagagtccagcatcagct
gaaagttgtgatggcactgaatccagggagatcaccgtgaacgaacagcctatggatcaa
tccacagacttgtatgcaggcaatgaactgcccagcaactcggagccctcacagccagat
ggaagtgccttagaagttgccagaagcccagaaaaagaaattattctccgagattatcag
atggaagtcgctggacctgccttggaggggaaaaacatcatcgtatgtctccccacagga
agcggtaaaaccagagttgcagtttatattaccaaagaacatctggacagaaggaaggct
gaagggaaaccaaggaaagtgatcgtcctggtgaacaaggttcctcttgttgagcagcac
tactctgcagaattcctgccctttctcaagaacaaatataaagtggagcgagtcagcgga
gactcccagctcaaaatctctttcacagaaatcgtgaagaagaatgacatcatcatttgc
acagcccagattctggaaaactacttagagagggctaacggtggagaggatgagggcgtg
aacttaagtgacctgacactcattataatagatgagtgtcaccacactcagaagggaggc
gtctacaaccacataatgatgcgatacctgaagcagaaacacaagaacaaaaggctcata
aaggagcagaaggagcctgtgcccctccctcagatcctgggcctgactgcctctccaggg
gttgggggagccacgaaaatggaaaaagccgaggagcacatactgcgtatctgtgcaaac
ttggacgcttccagaataatgacaaggagccacgaggaattcaaaaaggagcaaagaaaa
ataattgtttctgttgaagataggagggaggatccctttggtgatgtaatcaagaaaatt
atgactgccatccacaaccatgccgagctgacccccacctgtgacctcggctctcagaat
tacgaacagtgggttgttcaaaaagaacgacaagctgcaaaagatgaaaatcagaaagta
cgagtttgtgcagagcacctccgacagtacagcgagagcctgaatctcagcaacacgatt
cgcatgcaagatgccttcagtttcctgaacaaatactacgaggaggagatgaagaaaaaa
actgccccagaggaggagcataagatacaaatcacagatactgagaggttcctcttcaat
ctgtttaaagacaacaagaaggagctggagactctagcaaagaatccggagtatgaaaat
gacagtctgtcaaaactaagaactaaaattctgcatgagttcagctctcgggatgaagcc
agagggatcgttttcatcaaaacacgacgcagtgccattgctctaaatcagtggatacag
gaaaaccccaagtttgctgacattggagtgaaatcagcatatgtcattggaggaggagac
cagagcgttgttaaaccaatgacctcggcagagcaaaaggatgtgttgaaaaaatttggc
aacggtcaagtcaacctgctgattgctaccacagtagccgaggaaggcttggacatacca
gcctgcaatttcgttatccgatatggccttgtgacaaacgagatcgctatgattcaggcc
caaggcagaggaagagccgaggacagcagttacacgctggtcgaggtgaagaactccggg
gtggctgaaaaggagtgcgtcaatgaataccgcaagaacatgatgaacaaagccattcag
aaaattaaattgttaaatcaggcagcctatgaaaaaaggatcactgagtttcagattcag
gctataatggaagagaaagtaagaatgacgaagaagaagcagaaggacataaagaacgag
agcccatctaatgtgaagtttagctgccgaagctgcagcgagccaatctgcacgggcgac
gacatccagatcatcgaaaacatgcacagagtcaatgtgacgtcacaatttagaaaactt
tacattcagagagaaaatactactcttcaggagcgccttctcgactatgagaccaacggc
ttcattgcatgtaaaaactgcggacagagatggggttcaatgatgatgtacaaggggatc
gattgcccctgccttgatgtgaaaaactttgtggtgaatttaaatggaaagaagattagc
aaatgcaccaagtggaatgaagtccccatcaagttttctgccttcgactacgctgaacat
gcaagcaacatgaccatgtccgataactcggacgatgacgaaacaatgtga
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integrated database retrieval system
