Oreochromis aureus (blue tilapia): 116327821
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Entry
116327821 CDS
T07295
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau00260
Glycine, serine and threonine metabolism
oau00630
Glyoxylate and dicarboxylate metabolism
oau00670
One carbon pool by folate
oau01100
Metabolic pathways
oau01200
Carbon metabolism
oau01230
Biosynthesis of amino acids
oau01240
Biosynthesis of cofactors
Module
oau_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
116327821 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
116327821 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
116327821 (shmt1)
Enzymes [BR:
oau01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
116327821 (shmt1)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
116327821
NCBI-ProteinID:
XP_031605346
Ensembl:
ENSOABG00000015466
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All DBs
Position
LG4:complement(26600715..26606492)
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AA seq
482 aa
AA seq
DB search
MSLSNGHHVSKEEWESHNKMLLEPLAVNDSEVFSIIKKEKHRQTYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHIDELERLCQKRALEAYSLDSEKWGVNVQPYSGS
PANFAVYTAVVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVHPETGYI
DYDRLQENARLFHPKLIIAGTSCYSRNLDYARLKQIANENGAYLMGDMAHISGLVAAGVV
PSPFEHCDIVTTTTHKTLRGCRAGLIFYRKGVRSVDAKGKETLYNLESLINQAVFPGLQG
GPHNHAIAGVAVALKQAMTPEFKAYQLQVLANCKALSSALVDHGYKIVTGGSDNHLILLD
LRSKGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRGLVENDFRKVA
EFIHRGIELTVEVQKSLDPKANLKEFVQALSQGEKFQQRVAEIRAEVEAFAGQFPMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctttatctaacggccatcatgtgagcaaagaagaatgggaatcgcacaacaagatg
ctgctggagccgctggcagttaacgactcagaggtgttctccattattaaaaaagagaag
cacaggcagacgtacggtttggagctgatagcatctgagaactttgccagcagagctgtt
cttgaagctctgggttcctgtatgaacaacaaatactccgagggctatcctggccagagg
tactacggtggtacggagcatatcgatgagctagagagactttgtcagaagagagcactg
gaggcctacagtctggactcggagaaatggggtgtcaacgttcagccatactcggggtca
cctgcaaacttcgccgtctacactgctgttgtggagccccacggcaggatcatggggctg
gatcttccagatggaggtcacctgacgcacggcttcatgactgagaagaaaaaaatctcg
gcaacctcaatcttctttgaatccatgccgtacaaggtccatccagagactgggtacatc
gactacgacaggctgcaggaaaatgcacgactcttccaccctaaactcatcatcgcagga
acgagctgctattctcgcaaccttgactatgcccgcttgaagcagattgctaatgagaat
ggtgcctatctgatgggagacatggctcacataagtggattagtggctgccggagtggtg
ccctcaccctttgagcattgtgacattgttaccacgacgacgcacaagacactgcgtggc
tgccgtgctgggcttattttctacagaaaaggcgtgcggagtgtggatgccaaaggaaaa
gagactctgtacaacttggagtcattgattaaccaggccgtgtttcccggactgcaggga
ggaccgcacaaccacgccatcgcaggtgttgctgtagctctgaagcaagccatgacacca
gagtttaaggcctatcaattgcaggttctcgctaactgcaaggctctatccagcgctctt
gttgaccatggctacaagattgtcaccggcggctctgacaaccatctgatcctgctggac
ctgcgcagcaagggaaccgatggaggacgagcagagaaggtcctggaagcatgtgccatt
gcttgtaataaaaacacctgtccaggagataaaagtgctttgcggcctagcggcctgagg
ttcggctcgcctgctcttacctccagaggcttggtggagaatgacttcaggaaggtggct
gagttcattcacagaggcattgaactgactgtggaggtgcagaaaagtctggatcccaaa
gccaatctgaaagagtttgttcaggcattatcccagggagagaagttccagcagcgggta
gcagagatcagggctgaggtggaggctttcgccggacagttcccaatgccgggtctacct
gagctgtag
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