Oreochromis aureus (blue tilapia): 116331230
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Entry
116331230 CDS
T07295
Name
(RefSeq) calcium-responsive transactivator isoform X1
KO
K15623
protein SSXT
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116331230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oau03036
]
116331230
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116331230
GBAF(ncBAF) complex
116331230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
116331230
NCBI-ProteinID:
XP_031609697
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Position
LG20:13792140..13801841
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AA seq
415 aa
AA seq
DB search
MSVAFSSARPRSKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTSSMSLGPGGMGQSGGHGQSNLNDNMGPALPATSMMQSQMS
NGLSHAPMQQQSGQVQSAIPSTSLSLPASSYGSSVPGYSHAAPSSQGSMIQGPGPGYGSS
SSSSSTSSSSSSSSRSNLNMHSNQVSMMHQQSATPHYSSAQAGGQHYQGQQAMGMMGQGS
QGNSMMSQRPMGSYRSSQQGSAQQYMGQDEFYGEQYGHTQSSSEPINQQYYPDGHGEYSY
QQSSYGEQGYDRSFDESSQHYYEGGNSQYSQQQAQYQQSSGQQQAFSQQQYSSQQGYSGQ
PQGYGPVQGGSSQYSQYQQSQSQQYGSYRSSQGGPGAQTQRPFSYEQGQYGNYQQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgttttcatcggcgcgccccagaagtaaaggggaggtgacacagcaaacc
attcaaaagatgctggatgaaaatcatcatttaatacaatgcataatggattaccaaagc
aaaggcaagacagctgaatgcacacagtatcagcagatcctgcacagaaatcttgtttac
ttggccacaatagctgattcaaatcagaacatgcagtcattactacctgcgcctcccact
tccagtatgtctttgggtcccggagggatgggccagagtgggggacatggtcaaagcaac
ctcaatgacaacatgggaccagcactgcccgcgacatcaatgatgcagagccaaatgagt
aatggcctcagccatgcccccatgcagcagcagtctggtcaggtgcagtcggctattccc
tccacctccctcagcctgccagcaagcagctatggcagctcggtccctgggtacagccac
gctgcaccctcctcccagggcagtatgatccagggccctgggcctggttatggctcttcc
tcctcttcttcctccacatcctcatcttcttcttcctcctcccgcagcaacctcaacatg
cattccaaccaagtctccatgatgcaccagcagtctgccacaccacactactcctcagcc
caagctggggggcaacattatcagggacagcaggccatgggcatgatgggtcagggcagt
caaggaaacagcatgatgtctcagaggcccatgggatcctaccgctcttcccagcaagga
tctgcacagcagtacatgggacaagacgagttctacggagagcagtatggacacactcag
agctccagcgagcccataaaccagcagtattaccctgatggtcatggggagtattcatat
caacagtcttcatatggtgaacaagggtatgatagatcatttgatgaatcctcacaacat
tactatgaaggaggtaactctcagtacagtcaacagcaggcccagtatcaacagagctct
ggccagcagcaagccttcagccaacagcagtactcttctcaacaaggctacagtggacag
ccccagggatatggtccagtccagggaggatcatctcaatattctcagtatcagcagagt
caaagccaacagtatggatcctaccgatcttcccagggaggccctggagcgcagacgcag
aggccgttctcctatgaacagggtcaatatggaaattatcagcagtga
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