KEGG   Oreochromis aureus (blue tilapia): 116332009
Entry
116332009         CDS       T07295                                 
Symbol
ran
Name
(RefSeq) GTP-binding nuclear protein Ran
  KO
K07936  GTP-binding nuclear protein Ran
Organism
oau  Oreochromis aureus (blue tilapia)
Pathway
oau03008  Ribosome biogenesis in eukaryotes
oau03013  Nucleocytoplasmic transport
oau03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:oau00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116332009 (ran)
   03008 Ribosome biogenesis in eukaryotes
    116332009 (ran)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116332009 (ran)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oau03019]
    116332009 (ran)
   03009 Ribosome biogenesis [BR:oau03009]
    116332009 (ran)
   03016 Transfer RNA biogenesis [BR:oau03016]
    116332009 (ran)
   03036 Chromosome and associated proteins [BR:oau03036]
    116332009 (ran)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oau04147]
    116332009 (ran)
   04031 GTP-binding proteins [BR:oau04031]
    116332009 (ran)
Messenger RNA biogenesis [BR:oau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     116332009 (ran)
Ribosome biogenesis [BR:oau03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    116332009 (ran)
  Pre-60S particles
    116332009 (ran)
Transfer RNA biogenesis [BR:oau03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    116332009 (ran)
Chromosome and associated proteins [BR:oau03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     116332009 (ran)
   Spindle formation proteins
    116332009 (ran)
Exosome [BR:oau04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116332009 (ran)
GTP-binding proteins [BR:oau04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    116332009 (ran)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RNA_helicase AAA_24 ArgoMid Pox_A32 AAA_7 AAA_16 TsaE DUF5906 AAA_22
Other DBs
NCBI-GeneID: 116332009
NCBI-ProteinID: XP_031610749
Ensembl: ENSOABG00000016354
LinkDB
Position
LG2:13807590..13810323
AA seq 215 aa
MAQCVPVAVFKLVLVGDGGTGKTTFVKRHITGEFEKKYVATLGVEVHPLIFHTNRGAIKY
NVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCG
NKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPA
LAPPEVQMDPSLAAKYEEELQVASQTALPDEEDDL
NT seq 648 nt   +upstreamnt  +downstreamnt
atggcacagtgtgttccggtggcggtgtttaagttggttttggtaggagatggaggcacc
gggaaaactacttttgtgaagaggcatatcacaggagagtttgagaagaaatatgttgct
actcttggagtagaggtgcacccactgattttccacaccaacagaggagcaatcaagtat
aatgtgtgggacacagccggtcaggagaagtttggaggcctgagagatggctactacatt
caagctcagtgtgctatcatcatgtttgacgtcacttctcgagtcacctataagaacgtg
cccaactggcatcgtgacctggtccgtgtctgtgagaacattcccattgttctttgtggc
aacaaggtggacatcaaagacaggaaagtcaaagccaagagcattgtgtttcaccgcaag
aagaacctgcagtactacgacatttctgccaagagtaactacaactttgagaagcctttc
ctgtggttagcaaggaagttgatcggtgatcccaacctggagtttgtggcaatgcctgcc
cttgctcccccagaggtccagatggacccatcccttgctgctaagtatgaggaagagctt
caagttgcatcacaaacagcactcccagatgaagaagatgacctctaa

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