Oreochromis aureus (blue tilapia): 116334616
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Entry
116334616 CDS
T07295
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116334616
03036 Chromosome and associated proteins [BR:
oau03036
]
116334616
Transcription factors [BR:
oau03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116334616
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116334616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_jaz
zf-met
DTHCT
zf-C2HE
LIM
zf-C2H2_6
Rhabdo_M2
Motif
Other DBs
NCBI-GeneID:
116334616
NCBI-ProteinID:
XP_031613928
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All DBs
Position
LG1:complement(23931613..23938855)
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AA seq
748 aa
AA seq
DB search
MEAEVVSMESAQATDGKVLPEGGEALTQGEVAGNMEMMVMDALDPTLLQMKTEVLEGGGT
MTVSGGDEGQIITLQVVNMEEQAGAALGLGQLQLVQVPVTTTTVDGLQATYVETSAANKD
AEPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAHEELQGTRVEEEEEDEEPAEVET
SVPPQDDPEWTKDPDYQPITAVRKGKKGKKSRLRYAEGDRDMDVSVYDFEEEQQEGLLSE
VNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLC
GRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYS
SVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQS
GTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCDAVFHER
YALIQHQKTHKNEKRFKCDQCDYCCRQERHMIMHKRTHTGEKPFACSQCDKTFRQKQLLD
MHFKRYHDPNFIPTAFVCDKCSKTFTRRNTMLRHADNCTGDATLEENGTPPPKKGRRGRK
RKMQSRRDDDDDDTEGELDEAEEEEDMLTEIEVEQAPSVVPIPAPVEPPVKRKRGRPPKS
KPDTAAIIRVEDEATGEVDDIIVKKEVGADQDDDGNEAAQEVVVGEGKSTIQMEELSQGE
GVAQAGQLSEAPPNGDLTPEMILSMMDR
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaggttgtttccatggagtccgctcaggcgacggatggaaaggtcctgcca
gagggtggagaggccttgacacagggtgaagttgctggtaacatggagatgatggtgatg
gatgctctcgatccaactctgctacaaatgaagacagaggtgttggagggaggcggcaca
atgacagtttcaggtggagatgagggccagatcatcacgctccaggtggtgaacatggag
gagcaagcaggtgcagcattaggtctgggtcagcttcagctcgtgcaggtacctgtcaca
actacaactgtagacgggctccaggctacttacgttgagacgtcagcggctaacaaggat
gcagagccagttatttgtcacactcttcctttacctgagggcttccaggtggttaaagtg
ggtgcaaatggtgaagtggagactgtagagcaggaggagctccaggcagcccacgaggag
ctccaagggacaagggtggaggaggaagaggaggatgaagagccagcagaggtggagacc
tctgtgcccccacaagacgacccagagtggacaaaggaccccgactaccagcctattacc
gctgtccgtaaagggaagaagggaaagaagagtcgcctgcgctatgcagaaggcgatcgt
gacatggatgtttccgtgtacgactttgaggaagagcagcaggaggggctactgtcagag
gttaatgctgagaaggttgtgggcaacatgaagccccctaagcccacaaagatcaagaag
aaaggtgttaagaagactttccagtgtgagctgtgcagctacacctgcccacggcgctct
aacctggaccgacacatgaagagccacacagatgagaggccgcataaatgtcacttgtgc
gggagagcgttcagaacagtcacactgctgagaaaccacctcaacacacacacaggcact
cggccacataaatgcacagattgcgacatggcatttgtgaccagcggtgagttagtgcgt
catcgtcgctacaagcacacacacgagaagccttttaagtgctccatgtgcgactattcc
agtgtcgaggtgagcaagttgaaaaggcacatccgctctcacacaggggagcgacccttc
cagtgcagtctgtgcagctatgccagcagagacacttataagctgaagagacacatgagg
acacattctggtgagaagccatacgagtgctacatctgccatgctcgttttacacaaagt
ggcaccatgaagatgcacatcctgcagaaacacacggagaatgtggcaaagtttcactgc
ccacactgtgataccgtcattgcacgtaaaagtgatcttggtgttcacttgagaaaacag
cattcatttattgagacggggaagaaatgtcgttactgcgatgctgtgtttcatgagcgc
tatgctctcattcagcaccagaagactcacaagaatgagaagcgtttcaagtgtgaccag
tgtgactactgctgcagacaggaacgccacatgataatgcacaagcgcacccacacgggg
gagaagccattcgcctgcagccagtgtgacaaaactttccggcagaagcagctcctggac
atgcacttcaagcgttaccacgatcccaacttcatccccactgccttcgtctgcgacaaa
tgtagcaagacattcactcgcaggaacacgatgctgcgtcatgctgacaactgtacaggc
gacgctactttggaagaaaacggaactccaccacccaaaaagggacggcgtggcaggaag
aggaagatgcagtccaggagggatgatgatgatgatgacacagaaggtgagcttgatgag
gcagaggaggaagaagatatgctaactgagatcgaggtggagcaggccccatctgttgtc
cctatcccagccccagtggaaccaccagtcaagaggaaacgtgggcgccccccaaagagc
aaaccagacacggctgctatcatccgtgtggaggacgaggccaccggagaagtcgacgac
atcattgtgaagaaggaagttggagctgaccaagacgatgatggtaatgaggccgcacag
gaggtggtggttggtgaagggaagtcgaccatccagatggaggagctgtcccagggagag
ggtgtagcacaggcggggcagctgtctgaagcccctccgaacggggacctgactcctgag
atgatcctcagcatgatggaccggtga
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