Oreochromis aureus (blue tilapia): 116334933
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Entry
116334933 CDS
T07295
Symbol
cacna1ba
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04010
MAPK signaling pathway
oau04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116334933 (cacna1ba)
04020 Calcium signaling pathway
116334933 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oau04040
]
116334933 (cacna1ba)
Ion channels [BR:
oau04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116334933 (cacna1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
116334933
NCBI-ProteinID:
XP_039476627
LinkDB
All DBs
Position
LG12:39220578..39561265
Genome browser
AA seq
2351 aa
AA seq
DB search
MARFEDELSSRYGGGCPAAPARGGSRQPGPPGGQRMYKQTMAQRARTMAIYNPIPVKQNC
LTVNRSLFIFSEDNVIRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPASDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGADFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMGK
FHRTCFRINTSEQTADFPCGYEAPARTCANGTVCREYWIGPNFGITNFDNILFAVLTVFQ
CITMEGWVDILYNANDASGNMWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKR
QEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKSLDGAWYKRKHNNSVLKRT
RKSKNDLINAEEGDDHFTDISSVGSPYARASVKSKNESSSYLRRKEKRIRFTIRRLVKSQ
SFYWTVLCLVGLNTLCVAIVHYDQPEWLTYALYLAEFVFLGLFLVEMSMKMYGLGPQNYF
HSSFNCFDFGVIIGSIFEVVWAAMKPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSL
LNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVFQILTG
EDWNAVMYHGIESQGGVHGGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDE
EEQEEAINKKLALQKAKEVKEVSPMSAANISITAKEQQRSVKTMSVWEQRTSQLRKQNRA
SCEALYSELTSEERLHISSALHMQPDMKTHLDRPLVVEPHSGSNQHHHKKTCLPEEADTA
TDPPPSVPQKPRHHHYHRDRERKQETNDNGDSTKDGRHHVHHNRSKDHDSCRDKRGKSER
SHSREGGRKHRHQCSVDDSGGWGNVGERDHHHHHSHRQSRGGNGTVTSGGRGERRSRHKD
GNLSNRNGDRDSRGDNGASGERRRHRIHGSRGHSTESNDREKTHSHRFGDSEGESLAITP
QQGSGGTSWPPDHIEDSDNQRNVRRTGQTSIQIPPVTITSPPGETTLIQMNSIDCETVPI
NEKTLEDLGPCGPKPILPYSSMFIFGQTNPVRRLCHYIVTLRYFEMSILVVIAMSSIALA
AEDPVWTNAPRNNVLKYLDYAFTGVFTFEMVIKMVDLGLLLHPGSYFRDLWNILDFIVVS
GALVAFAFSGTKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIV
YILFMFIFAVIAVQLFKGKFFYCTDESKGLEKDCKGQFLDYDKDEVAAMPREWKKYEFHY
DNVLWAFLTLFTVSTGEGWPTVLKHSVDATFEDQGPSPGYRIEMSIFYVVYFVVFPFFFV
NIFVALIIITFQEQGDKALSECSLEKNERACIDFAINAKPLTRYMPENTQSFQYRMWKFV
VSAPFEYSIMIMIALNTVVLMMKFYGAPEFYEAMLKNLNIVFTTLFSLECILKIIAFGPL
NYLKDAWNVFDFVTVLGSITDILVTEINTTDRLLNLSFLRLFRAARLIKLLRQGYTIRIL
LWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELNEDTAINHHNNFRTFLQALMLL
FRSATGEAWHEIMLSCLSHRTCDERSGTDGKECGSDFAYFYFVSFIFLCSFLMLNLFVAV
IMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIKYLDMYQMLLHMSPPLGLGKKC
PPRVAYKRLVKMNMPIADDNTVHFTSTLMALIRTALEIKLASGIVAQRLCDAELKKELST
VWPNLSQKTMDLLVTPHKPNELTVGKVYAALMIFDYYKQNRARRLQQQQSASGSQCKVGA
LFKPLLPLTHIQEKDLPKMLNSVEPPSMLRYQPKSHAKSQPQTRPSSNSLNNGGTLPSQD
HTIKPSSSWVTDKPKEVPWAKNKRTMSRGPSEDTPDTAINQESVEMKKMETSVSSRIPFT
GPGLENQGRAASMPRLNTELQWSHSRHSPGIHLASVPDASPMKRSASTVTPQRPQEVNLR
DYTLEKPSQERPHHHHHHRRCHHRRDRDRDRDRDRENRQRSLDAPLAGQPPGSAGAVGEP
ASETTASRERAHDRGRSHERKHHHSSADKQRYYSCDRYCSRGQCHSKSSTASCAASPSEG
LETSNKQGSGWVKSSPVALSSNTSTPSRGRRQLPKIPHIPRPGVAYKTANSSPVHFVSSQ
TSLSPGRLSRGLSEHNALRHSGSHHFPCPVTRISSEPFLSQGQGKALGSLYGSLRDQLEV
FQDMAALSPSPCAGHSSWNVLPRMMGALSPAQQQNLGMPNGHHISFGSSTSPGSGVRAPR
CYQEAVKDEWC
NT seq
7056 nt
NT seq
+upstream
nt +downstream
nt
atggctcgatttgaagacgaactgtccagccgctatggaggcggctgtcccgcagcccct
gccaggggaggcagccggcagccggggcctccgggtggccagaggatgtacaagcagacg
atggcccagagagccaggaccatggccatttacaacccaattccagtcaaacagaactgc
ctcaccgtcaaccgctctttgttcatcttcagcgaggataatgtcatacggaaatatgcc
aaaaagatcaccgaatggcctccatttgagtacatgatcttggccactattatagcaaac
tgcattgtgctggccttggaacaacacctaccggcctcagacaaaaccccaatgtcagag
cgtttggatgacacagagccctattttattggaatattttgctttgaggctggcatcaag
atcattgccctgggctttgccttccacaaaggctcctacctgcgtaatggctggaatgta
atggactttgtggtggtcctaacagggatcctggccactgtgggggctgactttgatctg
agaacactgagggcggtgagagtgctgcgaccactcaaacttgtctctgggattccaagt
cttcaggtggttttaaagtccatcatgaaagctatggtaccactgttgcagattggcctg
ctgctcttcttcgccatcctcatgtttgccatcatcggccttgacttctacatggggaaa
tttcatcgcacgtgtttccggattaacacaagtgagcagacggcagatttcccctgtggc
tatgaagctccagcaaggacctgtgccaacggcactgtctgtagggagtactggatcgga
cccaactttggcattaccaattttgacaacatcctcttcgctgttctcaccgttttccag
tgtattacaatggagggatgggttgatatcctctacaatgccaatgatgcctcagggaac
atgtggaactggctgtacttcatccctctcatcatcatcggctctttcttcatgctcaac
ctggtgctaggtgtgctgtcaggggaatttgcgaaggagagagagcgtgtggagaagagg
caagaattcttgaagcttcgccgacaacagcaaatagagagagagttaactgggtacctg
gagtggatctgcaaagcagaagaagtgatgctggcagaggaagacaagaacgcagaagag
aaatctttggatggagcatggtacaaacgaaaacacaacaactctgtgctaaaacggacc
aggaagagtaagaatgatctcatcaatgcagaggaaggggacgaccattttactgacatc
tcatctgttgggtcgccatatgctcgggcaagtgtgaagagcaagaatgagagttcatct
tacctcaggaggaaagagaagaggattcgcttcaccatccggcgcctggttaaatcccag
agcttctactggacagtgttatgtctagttggcctaaatacattgtgtgtagctatagta
cactatgaccagcctgagtggcttacctatgcactataccttgcggagtttgtattcttg
ggcctgttcctggtggagatgtctatgaaaatgtatggtcttggaccccagaactacttt
cactcctcttttaactgttttgacttcggggtgatcattggcagtatttttgaggtggtc
tgggcagccatgaagcctggggcttcatttggaatcagtgtcctgcgagcactgagactg
ctccggatcttcaaagtcaccaagtactggaactcattgaggaaccttgtggtatcccta
ctcaactccatgaagtccattatcagcctgctgtttttgctcttcctcttcatcgtggtc
tttgctctgctgggtatgcagctctttggtggccagtttaattttgaagacgaaacaccg
acaaccaattttgacacattcccagcagccattctcaccgtcttccagatcctaactgga
gaggactggaacgcagtcatgtaccatgggattgaatcccaggggggtgtgcatggggga
atgttctcctccatttatttcatcgtacttactctctttggaaattacaccctcctcaac
gtgttcttggccattgctgttgataatcttgccaatgcccaggagctcactaaggatgaa
gaggagcaagaggaggctatcaataagaaacttgccctccagaaggccaaggaggtaaag
gaagtcagccccatgtcagccgctaacatttccatcacagctaaggagcagcagaggtca
gtgaagacaatgtcagtgtgggaacaaaggaccagccaactgagaaaacagaaccgtgca
agctgtgaggcactgtacagtgagctaacttcagaggagcgactgcacatatcgtcagcc
ctacacatgcagccagacatgaagactcaccttgaccggccgttggttgttgagccccac
agcggcagcaaccagcaccaccacaagaagacttgcttgccagaggaggctgacacagcc
acggacccacctccctctgtacctcaaaagccccgccatcaccactaccaccgagacaga
gaacgaaaacaggaaaccaatgataatggtgatagcactaaagatgggaggcatcacgtc
catcacaaccgctccaaagaccacgacagctgccgggacaaacgggggaaaagtgagagg
tcccacagccgggagggaggcaggaagcaccgccatcagtgttcagtggatgacagtgga
ggttgggggaacgtaggcgagagagatcaccaccatcatcattcacaccggcagtcccga
ggtggcaacgggacagtgactagtggagggaggggagagcgaagatctcgccacaaagat
ggaaatttgtctaacaggaatggggatagggattccagaggcgacaatggtgccagtgga
gagcgaagaaggcatcgcattcacggatccaggggacactccacagagtctaacgacaga
gagaagacccacagtcacaggtttggggattcagagggtgagtccttggctatcaccccc
cagcaaggctctggggggactagctggcctcctgaccatatagaagactcagataaccag
aggaatgtcagacgaactgggcaaacctccatccagattcctcctgtgactatcacctcc
ccacctggagagaccaccctaatacaaatgaacagtattgattgtgaaacagtgcccata
aatgagaagaccctggaggatctaggcccatgtgggcccaaacccatcctgccttacagt
tcaatgttcatctttggacagaccaatccggtgaggcggttgtgtcactatattgtgact
ctacgttattttgagatgtccatcctggttgtcattgctatgagcagtattgctctggca
gcagaggaccctgtctggactaatgcaccccgcaacaatgtgctcaaatatttggactat
gccttcactggtgttttcacttttgaaatggtgatcaagatggtggacctggggctattg
cttcatcctggatcctacttcagagacctgtggaacatcctggacttcatagtggtcagt
ggggcactggtagcatttgctttttcgggaaccaaaggcaaggacatcagcactatcaag
tcattgagggttcttcgagttctcaggcctctgaagaccatcaagcgcctgccaaaactc
aaggcggtgtttgactgtgtggttaactctctgaagaatgtgctgaacatcctcattgtt
tacatcctcttcatgtttatctttgccgtcatcgcagttcagctcttcaaggggaaattc
ttttattgcactgatgagtccaaaggcctggagaaagactgcaaaggacaattcctagat
tatgacaaagacgaggtggccgccatgcccagagagtggaaaaagtacgagttccattat
gacaatgtgctgtgggcttttttgaccctcttcactgtctcgaccggggagggctggcca
actgttctgaagcactcggtggatgccacctttgaagaccagggtcccagtccaggctat
cggatagaaatgtcaatcttctacgtggtctactttgtcgttttcccattcttctttgtc
aacatctttgttgctctgatcatcatcaccttccaggaacaaggagacaaggccttgtct
gagtgcagcttggaaaaaaatgagagggcatgtattgactttgccataaacgccaaaccg
ctaacacgttacatgcctgagaacacacagtccttccagtacaggatgtggaagtttgtg
gtgtcagctccgtttgagtactccatcatgatcatgattgctctcaacaccgtggtactc
atgatgaagttctatggagctccagagttctatgaagcaatgctgaagaacctcaacata
gtgttcaccactctcttctctctcgaatgtattctcaagataattgcttttgggccactg
aactacctaaaggatgcttggaacgtgtttgactttgtgacagtgctgggaagcattact
gacatcctagtgactgaaatcaatactacggacaggctgctgaacctgagctttctgagg
ctctttagagctgctcgactcatcaagctgctgaggcagggatacaccatccgcattttg
ctgtggacctttgttcagtcttttaaggccctgccttatgtttgtttactgattgcaatg
ctgttctttatctacgccatcattggaatgcaggtgtttggcaacattgagctgaatgag
gataccgctataaatcaccacaacaacttccgcacattccttcaggctctcatgctactg
ttcaggagtgcaactggagaggcttggcatgagatcatgttatcgtgcttgagtcaccgt
acatgtgatgagcgatcagggaccgacgggaaagagtgtggcagcgattttgcctacttc
tactttgtctctttcatttttctctgctccttcctgatgctgaacctgtttgtggctgtc
ataatggataactttgagtatctgaccagagactcgtccatcctggggcctcatcatctc
gatgagtttatccgggtttgggctgagtacgacccagctgcgtgtggccgtatcaagtac
ctcgatatgtatcagatgctgctccacatgtccccacccttaggtttgggaaagaaatgt
ccaccaagagtcgcctacaagcgcctcgtcaaaatgaatatgcctattgctgatgacaac
acagttcactttacctccactctgatggccctgattcgcacagcactggagatcaagttg
gcgtcaggaatcgtagcccagcgattatgtgatgcagagttaaaaaaggaattgtccaca
gtgtggcccaacctttcccaaaagaccatggacctgttggtgacgccacataaacccaat
gagctcacagtagggaaggtttatgcagccttgatgatctttgactactataagcagaat
cgagctaggagactacagcagcaacagagtgcttcgggctcccagtgcaaggtcggggct
ctatttaagccattgctgcctctgactcacatacaggagaaagacctccctaagatgtta
aacagtgtggagcctcccagcatgcttaggtaccagcctaaatcccatgccaagtctcag
ccacagacaagacctagctccaactcactcaacaacggaggcactctgccaagtcaagat
cacaccatcaagccgtcatcttcctgggtgactgataaacccaaagaagtgccatgggct
aagaataagagaacgatgtcccggggtccatctgaggacactccagacactgccatcaat
caggagtcggtagagatgaagaagatggagaccagtgtgagcagtagaattccattcact
ggccctggtctggaaaaccaaggccgagctgcttcgatgcctagactcaatactgagctg
cagtggagccattcacgccactctccagggattcatctagcttctgtccctgatgccagc
cctatgaagcgctcagcctcaactgtgaccccacagcggccccaagaggtcaacttaagg
gactacaccctggaaaaaccaagccaggagagaccccaccaccatcaccatcaccgtcgc
tgccaccaccgtagagaccgagacagagatagagacagagacagagagaacagacagagg
tctttagatgcacctttggcaggtcaacctcccggttctgctggtgcagtgggtgagcca
gcatcggaaacaacagcctccagagagcgagcccacgaccgtggacgctcccatgaaagg
aaacaccatcattcctctgcagacaaacagcgctactactcttgtgaccgctactgcagc
cggggacagtgccactcgaaatcttccaccgccagctgtgccgcctctccaagtgaaggg
ctggaaaccagcaacaagcagggcagtggttgggttaaaagcagcccagtggcactgagc
tccaatactagcacgccaagccgtggacgtcggcagctccccaagatcccccacatcccg
cgacctggggtagcttacaagactgccaattcctcccctgtgcattttgtgtccagccag
acctctctgagtcctggccggctaagccgtggcctctcagagcacaatgccctccgtcac
agcggctctcaccacttcccctgccccgtcactcgtatcagctcagagcccttcctgagc
cagggccagggcaaggccctgggtagcctctatggcagcctccgggaccagctggaagtc
ttccaggatatggcagcgctgtctcccagcccctgtgctggacactcctcttggaacgta
ctgcctcgcatgatgggagccttgtctcctgctcaacaacagaaccttggtatgcccaat
gggcaccacatcagctttgggagtagcaccagcccaggttctggcgtcagggcacccagg
tgttaccaggaggcagtgaaggatgaatggtgctag
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integrated database retrieval system
