KEGG   Congregicoccus parvus: ASA1KI_42280
Entry
ASA1KI_42280      CDS       T10563                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
oba  Congregicoccus parvus
Pathway
oba03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:oba00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ASA1KI_42280 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oba03021]
    ASA1KI_42280 (rpoB)
   03400 DNA repair and recombination proteins [BR:oba03400]
    ASA1KI_42280 (rpoB)
Enzymes [BR:oba01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     ASA1KI_42280 (rpoB)
Transcription machinery [BR:oba03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     ASA1KI_42280 (rpoB)
DNA repair and recombination proteins [BR:oba03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      ASA1KI_42280 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: BET69310
LinkDB
Position
complement(5302211..5305990)
AA seq 1259 aa
MVDRSNFGKLKEVIQPPNLIEIQINSYLEYLQKEVPASQRRAVGLEAVFREVFPIQSYDE
RLTLEYVSYTIGDPKNTELECYREGITYSVPLYVKLRLREEAFIKDEDIYMGEIPMVTDR
GSFIINGADRVVVSQLHRSPGICFEVATHPNGKLLHSFRIIPDRGTWLEVQFDNNDLLYV
YLDRRRRRRKFLITTLLRALGFSTDVDILGLFYDIQDLETTKALELENVSSLVLVEDAID
AQKGVVLARAFEPLTKAIVRQFDQHGIHSLRVIDTTVDEGAIIRALKKDPTRNEEEALKE
IYKRLRPGEPPTVANSKALLKRLFFDPKRYDLGRVGRYKINQKLNLKTDLEAGRILNSED
IVEASKYLIRLKKGDGVVDDIDHLGSRRVRTVGELLANQCRVGLARTERLVRERMTLFDQ
SVDSITPQKLINPKALTTVIRDFFARSQLSQFMDQINPLAELTHKRRLSALGPGGLNRDR
AGFEVRDVHPSHYGRICPIETPEGPNIGLINSLSIYSRVNEFGFIETPYRICRDGVAAEE
IDYLTADQEEGKVIAQANSELDESGRFIGKVTVRKSGNFLEVLPEEVDYMDVSPKQLVSV
ASGLVPFLEHDDANRALMGSNMQRQGVPLLQTESPFVGTGIEERVARDSKTVVVSEHDGI
VASVDARRIVISQDGELPARFDRNPKSDPKAGVWVYELRKFMRSNAGTCFNQKPIVKKGA
AIKAGDIIADGPSTDRGELALGRNVLVAFMPWNGYNFEDAILISEKVLKEDIFTSIHIQE
FEVTARDTKLGPEEITRDIPNVGEDALKNLDHNGVVRIGAEVKPGDILVGKITPKSETEL
APEEKLLRAIFGEKAADVKDTSLVVPSGVNGIIMDVKVSSRIDFEKEKLSPSDRRRQVKQ
INEDYKTQMEKLREGLTEALSNILLGEKIPLDVVNGETGEVIIPANRKITKTLLRKLAAV
SKHIEIDPSPVRIKIMEIIGSYQSKFDELETDRERKIGGIEAGDEVAPGVIKQVKVYVAT
KQKLEVGDKMAGRHGNKGVVAKIVPEEDMPYLPDGTPIQICLNPLGVPSRMNVGQVLETH
LGWACSKLGFRVATPVFDGIAEKKVREYLRDAHLPVSGKSMLYDGRTGEKLDQDVVVGFI
YMMKLNHLVSHKIHARAVGPYSLVTQQPLGGKAQYGGQRFGEMEVWALEAYGAAYTLQEL
LTVKSDDVAGRTKIYESLVKGDTSLSAGTPESFNVLIKEMQALGLDVRLQKSDVLNPAV
NT seq 3780 nt   +upstreamnt  +downstreamnt
atggtcgaccgctccaatttcggtaagctcaaggaagtaatccagccgcccaatctgatc
gagatccagatcaactcgtatctggagtatctacagaaggaagtgcctgcgagccagcgc
cgcgccgtcggcttggaagccgtcttccgcgaggtctttccgatccagagctacgacgag
cgtcttacgctcgagtacgtttcctacacgatcggagatcccaagaacacggagctcgaa
tgctaccgtgaggggatcacgtattcggtgccgctgtacgtgaagctgcgcttgcgcgaa
gaggcgttcatcaaggacgaggacatctacatgggcgaaatcccgatggtgaccgaccgc
gggtcgttcatcatcaacggtgccgaccgcgtggtggtcagccagctccaccgttcgccc
ggcatttgcttcgaggtggcgacacacccgaacgggaaactgcttcattctttccgtatc
atcccggatcgcggcacgtggctcgaggtccagttcgacaacaacgacctcctctacgtc
tacctcgaccgtcgccgtcgccgccggaagttcctcatcacgactctgctgcgcgcgctc
gggttcagcaccgacgtggacatcctcggactgttttacgacattcaggatctggagacc
acgaaagcactcgagttggaaaacgtctcgagcctcgtcctcgtcgaagacgcaatcgac
gcgcaaaagggagtcgtgcttgcgcgcgcgttcgagcccctcaccaaggcgatcgttcgt
cagttcgatcagcacggcatccactcgttgcgcgtgatcgacaccacggtcgacgaaggc
gcgatcatccgagcgctcaagaaggatcccacccgcaacgaggaggaagcgctcaaggaa
atctacaagcggctccgtccgggtgaaccgccgaccgtcgccaactcgaaggcgctcctg
aagcgtctcttcttcgatcccaagcgttacgatctcggtcgggtggggcgctacaagatc
aaccagaagctcaacctcaagaccgatctcgaggccgggcgcatcctcaactccgaggac
atcgtcgaagcatcgaagtacctcatccgcctcaagaagggtgacggggtcgtcgacgac
atcgatcacctcggcagccgccgcgtccgcaccgtgggcgagttgctcgccaaccagtgc
cgtgtcggtctcgcccgcaccgaacgtctcgtgcgcgagcgcatgacgctgttcgatcag
agcgtggactcgatcacgccgcagaagctgatcaacccgaaggcgctgaccacggtcatc
cgggacttcttcgcccgtagtcagctctcgcagttcatggaccagatcaatcctctggcc
gaactgacgcacaagcgccgtctttccgcgctcggaccgggcggcctcaaccgcgatcgt
gccggcttcgaagtgcgcgacgtgcacccctcgcactacggacgtatctgcccgatcgaa
acgccggaaggtccgaacatcggtctcatcaactccctctcgatctactctcgtgtcaac
gagttcggcttcatcgagacgccgtaccgcatctgccgcgacggagtcgccgccgaggag
atcgactacctcaccgccgaccaagaggaaggcaaggtcatcgcccaagcgaactccgag
ctcgacgagagcggtcgtttcatcggcaaggtcaccgtccgcaagagcggcaacttcctc
gaagttttgcccgaggaagtggactacatggacgtctccccgaagcagctcgtttcggtc
gcttcgggtctcgtgccgttcctcgagcacgacgacgccaaccgcgcgctcatgggctcg
aacatgcagcgtcaaggcgttccgctcttgcagacggagtcgccgttcgtgggcaccggc
atcgaggagcgcgtcgcacgcgactccaagacggttgtcgtttccgaacacgacggtatc
gtggcttcggtcgacgcccgccggatcgtgatcagccaagacggtgagcttccggctcgt
ttcgaccgcaatcccaagtccgacccgaaggctggggtttgggtctacgaactgcgcaag
ttcatgcgctcgaacgccggtacctgcttcaaccagaagcccatcgtgaagaagggcgcg
gccatcaaggccggcgacatcatcgcggacggtccatcgaccgaccgcggcgagctcgcg
ctcggtcgcaacgtgctggtcgcgttcatgccgtggaacggatacaacttcgaggacgcc
attctcatctccgaaaaggtgctcaaggaggacatcttcacctcgatccacatccaggaa
ttcgaggtcaccgcgcgcgataccaagctcggacccgaagaaatcacccgcgacatcccg
aacgtcggcgaagacgcgctgaagaatctcgaccacaacggcgtcgttcgcatcggtgcc
gaggtgaagcccggcgacatcctcgtcggcaagatcacgcccaagagcgaaaccgaactc
gcgccggaagaaaaactcctgcgcgccatcttcggtgagaaagccgccgacgtgaaggac
acctcgctcgtggtgccctcgggcgtcaacggcatcatcatggatgtgaaggtctccagc
cggatcgacttcgagaaggagaagctcagcccctccgaccgtcgtcgtcaggtgaagcag
atcaacgaggactacaagacgcagatggagaagctccgcgaggggctcaccgaggcgttg
tccaacatcctcctcggcgaaaagatcccgctcgacgtggtcaacggcgagaccggcgag
gtcatcattcccgccaaccgcaagatcaccaagacgctcctgcgcaagctcgccgccgtc
tccaagcacatcgagatcgatccgtctccggtgcgcatcaagatcatggagatcatcggt
tcctaccagtcgaagttcgacgagttggaaaccgaccgtgagcgcaagatcggagggatc
gaagcgggcgacgaagtcgctccgggagtcatcaagcaggtcaaggtctacgtcgccacc
aagcagaagctcgaggtcggagacaagatggctggacgtcacggcaacaagggcgtggtc
gcgaagatcgtgcccgaggaggacatgccgtatttgcccgacggcacgcccattcagatc
tgtctcaacccgctcggcgtgccttcgcgcatgaacgtcggacaggtgctcgaaactcac
ctcggttgggcctgcagcaagctcggcttccgcgtcgcgaccccggtcttcgacggtatc
gccgaaaagaaggtccgcgagtatctgcgcgacgcccacctccccgtgtccggcaagagc
atgctctacgacggtcgcaccggcgagaaactcgatcaagacgtggtcgtcggcttcatc
tacatgatgaagttgaatcacctcgtctcccacaagatccacgcccgcgcggtcggacct
tactccctcgtcacgcagcagcctttgggtggaaaagcccaatacggcggccagcgcttc
ggcgaaatggaggtgtgggcgctcgaggcctacggcgccgcctacacgctccaagagctg
ctcacggtgaagtccgacgacgtcgccggacgcaccaagatctacgagtcgctcgtgaag
ggagacacctctctctccgccggcactcccgaatcgttcaacgtcctcatcaaagaaatg
caggccctcggcttggacgtccgcctccagaagagcgacgtcctcaaccccgcggtctga

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