Osmia bicornis bicornis (red mason bee): 114882585
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Entry
114882585 CDS
T06109
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
obb
Osmia bicornis bicornis (red mason bee)
Pathway
obb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114882585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obb03019
]
114882585
Messenger RNA biogenesis [BR:
obb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114882585
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114882585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
HTH_upst_double_PIN
Motif
Other DBs
NCBI-GeneID:
114882585
NCBI-ProteinID:
XP_029055287
LinkDB
All DBs
Position
Unknown
AA seq
2402 aa
AA seq
DB search
MNLDSLSFTLSQISYLVANLNKKNFRDSCQEISVLVQWKGLEADRHLLRSLLSCIDFSTG
EPPESSAKDYFQVQLLKQECTNLLSKPSFISNLCFAIDHPFHQQKTLNPSPKFFLRLKKV
LGLTLVQEVAFAIALLHSENTEIRTLALEHVKKQLPELIKNYINSETSNKHQEEGLHDSL
PEVLHLILSQAFHSANQFGLSSEAKEKFLKNLRRDFPRELVPVVLAPLLYPDNGETSQAK
IELNMAVNQMDGNSLVELIMELGYGFTGSVDECRSALAGLGAREISPACAARVLAHMARS
CNSLDDAGGLQSFWGNSGATQDANKEKSADSVAPTTWNVDVFIQALKEIQSTLSWNEVIV
KLDHAEFVVKDRQGLSLLITGLRMGLQHQGYPPDMFPVELFYRHWDNVEGQFSLVQQILK
CPDIFCFADYPYHSVTVDVLKAAPESDSKEAQTWRSLNVVELLLHMAERGLYGPVQEIFK
WPIQHCPDVLVLALLQINAPVTILRQELLSTLMPIFLGNHPNSAVILHHAWHGNTVKIKS
IIMHAMAEWYIRGDHDQTRLSRILDVAQDLKALTHLLTAQSYPFVIDLACLASRREYLKL
EKWLTDKIREQGEVFVAACVKFLQRRCPQVMGPGIKEDITVPKASQLPQETLTTMLACLQ
VCAGSVSQECSDAIMTMVQNCSLMLSKSTMSRPPPPGVLRHRGLEPFNPATLGGQLFSSK
QVDPLGNLSSSLASMGLGSSLGPPSSSAFNLPGALGPLVSAPGSPSRLMGPSPSPFPMLP
LSSQLHSGPVGTQGPSVLPGSTTIGGLGRLGPPTGIEKARIPETSNLFPDMSQNVSKEIE
DEANSYFQRIYNHPPHPTLSIDEVLDMLKKFQDSGSKREREVFNCMLRNLFEEYRFFPQY
PDKELQITAQLFGGIIERGLVNSYMTLGLALRFVLDALRKPEGSKMYYFGITALDRFKSR
LKDYQTYCEHVRAIQHFSEFPPHLIEYIEYGLQGQEPPTRPQGPVLPKTLAAMLAPVTTP
YKTITTTTITTSTTQAKSSTTPTTSLSARPSIANATNIDTLLVATDKEEKITSPPEALQD
KTAFIFNNLSQLNLQQKCDEIREIVTEEYWPWMAQYLVMKRASIELNFHALYSNFLDCLK
LPEVNKMVTRETFRNIKVLLRSDKGIANFSDRSLLKNLGHWLGMLTLGRNKPILQIDIDL
KSLLVEAYHKGQQELLYVVPFVAKVLESCAKSRVFRPPNPWTMAIMNVLAELHQEPDLKL
NLKFEIEVLCKNLSIDVGELKPALYLKDPEKLRNLEYQLSHPNKKSESNNNQQQAQGPIE
ELVGSTTTGTIIPQTAPANTTPSLPTGPPEPRFNYMDISVTGIANISQHITINNQLPLFQ
TNPHLKQFVRPAVERAIQEWIHPVVDRSIKIALTTSEQIVRKDFALDPEEVRMRTAARHM
VRNLTAGMAMITCRDQVMASISTNLKQAFLTAMMGTTPQQKELAEQAANVVAADNMELAC
AFVQKTAIEKAIPEMDKRLLNEIELRKIARQEGRRYCDPLAKYQAERMPEQIRLKVGGVT
AQQMAVYEEFARNIPGFLPLSERDTQALLMPKPVTEPTVTAFAANPAVAVATAQQVAAYA
AAVSNDEVGAMLEKLAAEVEVLLAAMGPAVPPPQHAALHSLLESIILTRRSRDAGAAMTL
LKKAVEGLLDGPSISSGVIDSEIILRYRELHLRILKCLQDPRAYGMQWTNKHVTRCLTEC
REEFRYNFEAVDYLIRSHLISLPQYDLALAQAIDSGNAMATAFAMQLVQLYLIDERQTTH
VTESDLFHTIEILARMAHHRAPPEGILLFRLTSLIESLRANHDPGVLADRAPAGPTAHIH
SGILQVRARDFDDPPGLMEKTEYLLREWVSMHHSPTHARDPTKAFGMFVHQMNIHGILKT
DDLITRFFKLSTQMCVDLCYRALSETSAAPSVVRAKCFHSLDAFVRLVALLVKHSGDSTN
THTKINLLNKVLGIVAGVLLQDHEIRGTDFQQLPYHRIFIMLFLELCAPEPVLEAVNYQV
LTAFCHTLHILRPAKASGFCYAWLELVSHRVFIGRMLAITPQQKCWGMYAQLLIDLFKYL
APYLRNAELAKPVTLLYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQMRNLILSA
FPRNMRLPDPFTPNLKVDMLQEIAHAPRVLTNFASMIQPLSFKKELDSYLKARAPVTFLS
ELRSNLQVSQEAGVRYNIQLMNALVLYVGTQAIAYIRSKGHTPNMSTIAHSAHMDIFQNL
AVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTLLYLFAEANTEAIQEQITRVLLERLIV
NRPHPWGLLITFIELIKNPTYKFWTHEFVHCAPEIEKLFESVARSCMVQKQVQPTPEPDI
PE
NT seq
7209 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactcgttgtcttttactttgtcacaaatcagttatttggttgcgaattta
aataagaaaaattttcgggacagctgccaagaaatatcagttctggtgcagtggaagggt
ttggaggcagacagacatttgctgcgctctttgctgtcgtgcattgacttttcaacagga
gaaccaccagaatcaagtgcaaaagattattttcaagtgcaacttctgaaacaagagtgt
actaatcttcttagcaaaccttcttttatttctaatctgtgctttgctatagatcatcca
tttcatcaacaaaagactttgaatccatctccaaagttttttttacgtttgaaaaaggtc
cttggcttaactctggtacaagaagttgcatttgcaattgcattattgcattctgagaat
actgaaattcgtacattagctctagaacacgtaaaaaagcagttgcctgagttaataaaa
aattatattaattctgaaacaagcaataagcatcaggaagaaggattgcacgattcgttg
cctgaagttcttcatctgatattgtctcaggcttttcattcagccaatcaatttggcctt
tcatcagaagcaaaagaaaaatttctcaagaatttaaggcgcgactttccccgtgagctg
gtaccagtggtgttagcaccactcctgtacccagacaacggggaaacttcgcaagccaaa
attgaattaaacatggctgttaatcaaatggatggaaattctttagtagaattgattatg
gaattaggatatggattcactggtagcgttgacgaatgtcgttcagccttagctggccta
ggagctagagaaatatctccagcatgtgctgccagagttttggctcatatggcacgtagt
tgtaatagtcttgatgatgctggaggtttacaatcattttggggtaattcaggagcaaca
caagatgcaaataaagaaaaatcagctgatagtgttgcacccactacatggaatgttgac
gtctttattcaagctttaaaagaaattcaatccacactatcatggaatgaagtaatagtt
aaattggatcatgcggaattcgttgtcaaagatagacaaggattgagtttgttaatcaca
ggactgaggatgggtttgcaacatcaaggatatccacctgatatgtttcctgtggaactt
ttttatcgtcactgggacaatgtagaaggacaattttctttagtacaacaaattctaaaa
tgtccagatatattttgttttgccgattatccatatcattctgtaactgttgatgttttg
aaagcagcaccagaaagtgacagtaaagaagcacaaacatggagatctttaaacgtagtt
gaattacttctacacatggcagaaagaggactgtatggaccagttcaagaaatatttaaa
tggcccattcagcattgtcctgatgttcttgtactagcgctattacaaattaatgctcct
gttactatactacgacaagaattacttagtacattgatgcctatttttcttgggaaccac
ccaaattctgccgttatactgcatcatgcgtggcatgggaatacagttaaaataaaatct
atcattatgcacgctatggcagaatggtatatccgcggagatcacgaccaaacaaggcta
tctcgtattcttgacgttgctcaagaccttaaagcgttaactcatttacttactgctcag
tcatatccatttgttattgacttagcctgtttggcctccagaagagaatatttgaaatta
gagaaatggttgacggataagattagagagcaaggagaggtttttgtcgcagcttgtgta
aaatttttacaaagacgttgccctcaagtgatgggtcccggaataaaggaagatattacg
gttccaaaggcgagtcaacttccacaagagacgttaacaactatgcttgcttgcttgcaa
gtgtgtgctgggagtgtttctcaagagtgttccgatgcaataatgacaatggtacaaaat
tgtagtctaatgttgagcaaaagtacaatgagtagacctccacctccaggagttttaaga
cacagaggactagaaccttttaatccagcgacattagggggacagctgttctcttcgaaa
caagtagacccgcttggaaatttaagttcaagtcttgcatctatgggtttgggttccagt
cttggaccaccaagcagttctgcattcaatttacctggcgctttgggacctttagtatca
gcacctggttctccttctcgtcttatgggaccttctccaagtccatttccaatgttacca
ttatcttctcagctgcattcaggaccagttggtactcaaggaccatctgttttacccggc
agtacaacaattggaggattgggtcgactgggaccacccacgggcatcgaaaaagcaaga
atacctgaaacgtcaaacttatttcctgatatgtcacaaaatgtttccaaagaaatcgaa
gatgaagcgaatagttattttcaacgtatatacaatcatccaccacatccaacattatcg
atcgacgaagttcttgatatgttgaaaaaatttcaagattctggtagtaaaagagagaga
gaagtattcaactgtatgttacgaaatttattcgaggaatatcggttttttcctcaatac
cccgataaagagttacaaatcacggcacaattgttcggaggaattattgaaagaggattg
gttaatagttacatgacacttggattagccttaagattcgttttggatgccctcaggaaa
ccagaaggcagcaagatgtattacttcggcataacagctctggatcgtttcaagagtcgt
ttaaaagactaccaaacatactgtgagcacgtcagggcaattcagcatttcagtgagttc
ccaccacatttaattgagtacatagaatatggattacaggggcaggagcctcccacaaga
cctcaaggtccagtcctcccaaaaactttagcagctatgctggcacctgttactactccg
tataaaactattacaacaacaacgataacgacaagtaccactcaagcaaaatcatctaca
actccaactacatctctctcggcaagaccttccattgctaatgcaacaaacattgatacg
ttattggtagcaacagataaagaagaaaaaattacatcgcctccagaagctttacaagat
aaaacagcattcatctttaacaatcttagccagcttaatttacaacagaaatgtgatgaa
attcgagaaattgtcacagaagagtattggccttggatggctcagtatttagtgatgaaa
cgtgcaagcatagaattaaattttcatgctttatattcaaactttctggactgtttaaaa
ttacccgaagtaaataaaatggttactagagaaacgtttagaaatataaaggttttatta
cgaagtgataaaggaatagcaaatttttcagatcgatcattactcaaaaatttgggtcat
tggttaggaatgttaacacttggcagaaataagcccattttgcagatcgatatagatttg
aaaagtttactcgtcgaagcatatcataaaggtcaacaggaacttctttatgtagttccc
tttgttgctaaggtacttgaaagctgtgcgaagagtcgtgttttccggccaccaaatcct
tggacaatggcaattatgaatgtgctggcggaattgcatcaggaacctgatttaaaattg
aatttgaaatttgagatcgaagtgctttgcaaaaatttaagtatcgatgttggtgaatta
aaaccggcactttacttgaaagatcccgagaagttacgaaatttagaatatcagttgtcg
catcctaataaaaaatcggaatcaaataataatcaacaacaagctcaaggcccaattgaa
gaattagttggatctactacgactggtacgattattccacaaacggctccagcaaataca
acaccatctttacccactggtccaccagaaccacgattcaattatatggatatatctgta
acagggattgctaatatatctcagcacattaccattaataaccaactaccattgttccaa
acgaacccacacttaaaacaatttgttcgtccagcggttgaaagggcaattcaagaatgg
attcaccctgttgttgaccgttcaattaagatagctctgactactagtgaacaaattgta
agaaaggattttgcattagatccggaagaagttcgaatgagaacagcagcaagacacatg
gttcgtaatttaaccgctggaatggctatgatcacttgccgtgatcaagttatggcgtcg
attagtacaaatttaaaacaagcttttctaaccgcaatgatgggtacaactccgcaacaa
aaagaacttgcggaacaagcagctaatgtagttgccgctgacaatatggaacttgcctgt
gcatttgtacaaaaaacagctattgaaaaagctattcctgaaatggataaacgtcttcta
aatgaaattgaattacggaagattgcacgtcaggaaggaagaagatattgcgatcctttg
gctaaataccaagccgaaaggatgcctgagcaaatcagactaaaagtaggcggtgtgaca
gctcaacaaatggctgtttatgaagaatttgcgagaaatattcccggatttttaccactt
tctgaacgagatacacaagctttgttaatgccaaaacctgttacagaaccgactgtaact
gcattcgccgccaatccagcagttgcggtagcaacagctcaacaggtagctgcatatgca
gccgcagtgagtaatgatgaagttggagcaatgttagagaaacttgcagctgaagttgaa
gtattacttgccgccatgggcccagctgtacctcctccacaacatgctgcccttcatagt
cttttagaatctattattcttacgcgaagatcgagagacgcaggtgctgctatgacgttg
cttaaaaaagcagtagaaggactgttagatggtcctagtatttcgagcggtgtaatagat
tccgaaattatattacgatacagagaacttcatttacgcattctgaaatgtcttcaagat
ccacgtgcttatggcatgcagtggacaaacaaacacgttactcgttgtttaacagaatgt
agggaagaatttcgatacaattttgaggctgttgattatcttattagatctcatttaatt
agtcttccacagtatgacttagcattggcccaagctatagattctggaaatgctatggca
acagcatttgccatgcagttggtgcagctttatttaattgatgagagacagactacacac
gttaccgagtctgatttattccacacaattgagatactagccagaatggctcatcataga
gcacctcctgaagggatcttattattcagattaacgagtttgatagagtcattacgcgct
aatcatgatcctggagtattagcggacagggcacctgctggacctacagcacatattcat
tctggaattctacaggtgagagcacgtgattttgatgatccacccggattgatggaaaaa
accgagtatttattacgcgaatgggtttcaatgcatcatagcccaacgcacgcacgtgat
cctacgaaagctttcggaatgtttgttcatcaaatgaatattcatggaatccttaagacc
gacgaccttataacaagattcttcaaattaagcactcaaatgtgtgttgatctgtgttat
cgtgctttatccgagaccagtgcagctccatccgttgttcgtgcaaagtgtttccattcg
ttggatgctttcgttcgcttggtcgcgcttttggtcaaacattctggtgacagtacaaat
acccatacgaaaattaatttactaaataaggtattggggatcgttgccggtgtattatta
caagatcatgaaatacgaggcaccgatttccaacagttgccctatcacagaattttcatt
atgctcttcttagagctttgtgctcctgagccagtattggaagcagtcaattatcaggta
ttaactgctttctgccatactttacacatacttagaccagccaaagcttcaggcttttgc
tatgcttggttagaattggtttcgcatagggttttcattggacgcatgctcgcaattaca
ccgcaacaaaaatgttggggtatgtacgcgcaattattaattgacttattcaaatatctc
gcaccctatcttcgaaatgctgaacttgcaaagccagtcactttattatacaaaggtact
cttagagtattgctggtcttactgcacgattttcctgaatttctttgcgactatcattac
ggattttgtgatgtaattccaccgaattgtatacaaatgagaaatcttattctaagcgca
ttcccaaggaacatgcgtttaccagatccattcacaccaaatctaaaagttgacatgcta
caagaaatagcacatgctcctcgagtattgactaattttgcatctatgatacaaccgctt
agtttcaagaaggaactcgattcatatttgaaggcgcgtgcaccagttactttcctttct
gaattacgcagtaatttacaggtatctcaagaagctggtgttcgctacaatattcagtta
atgaatgctcttgtactctatgtaggtacacaagctatagcttatattcgcagtaagggg
catactcctaatatgtctactatcgcacattctgcacatatggacatattccaaaactta
gcagttgatctcgacacagaaggtcgttatttgtttttaaatgcaattgcgaatcaactt
cgatatcctaacagccatacacattactttagttgtacactcctgtatttgtttgctgaa
gctaataccgaagcgatacaggaacagattacgagagttcttctcgaaagacttattgtg
aatagacctcatccatggggtcttttgataacatttattgagcttataaaaaatccaacg
tacaaattctggacgcacgagtttgttcattgtgcaccagaaattgaaaaattatttgaa
tcagtggctcgttcttgtatggttcaaaaacaagtacagcccactccggaaccggatatc
cctgagtga
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integrated database retrieval system
