Ooceraea biroi (clonal raider ant): 105275642
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Entry
105275642 CDS
T05778
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105275642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105275642
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
105275642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_16
TPR_1
TPR_19
TPR_CcmH_CycH
TPR_14
TPR_17
TPR_8
TPR_12
TPR_11
TPR_9
ANAPC3
PknG_TPR
ARM_TT21_C
TPR_21
TPR_7
ChAPs
BTAD
Tsc35
DUF7017
ARM_TT21_5th
DUF5588
TPR_10
TPR_4
Motif
Other DBs
NCBI-GeneID:
105275642
NCBI-ProteinID:
XP_011330925
LinkDB
All DBs
Position
8:9259886..9265408
Genome browser
AA seq
1299 aa
AA seq
DB search
MSDEIKALLKEARESFKRNEHLEAMKKCKKVLKKDKNNYTALVLLARAMQEVEEFKSQVV
LVLQKATEIQPNNPLAWQGLVVYYEKASQDDNNWRKLATAYCKLLQLDSDSPKFTHFINK
VSEIVLRIKDDEVLSEVLTTLSTLREVSAEERTSLIDKTLAWVLTEYPSSGVKNHQELYE
DILASVIKDTDLMNRQEYYRRYLKALYDSNKYTVLLTAAEDMHAQFPQDAQSLEWICRVY
YEEAILNGHELGVNVTYFYESLLKLIANSEIALIAKAAYFKSANELISSRECLNQVIAVN
VRSFYAWLTLSQVYCKLYCWEEAENASRQALQLMKSNLKEKLCRRVKLRLLEAMSRSGSK
QKLLQARQMCEELLNIESSVQLQVINVRVNVSLDEPDAVAALSVLESQDETKIQAFILKA
LHLMKREQYEEAINALELALESSEAWLLFGKIYWHMGDYNHSLMAFLNGFRADRNNWECM
IYLGHYYREHGNDIERSRRCYHAALQINPNSEEAGIGLSTAYRLLKNTEANMQLLQRVTM
QSTGPKWAWLQLGLHHLDQGDAGQAIKALQHVIRTDPNDNHSWESLADAYLVGGAHVSAL
KSYQRALQLSPGSLYPIIQLANIKLLIGQHKEAREDFENILENDKQYIPALKGLAQACLG
LARENISRQLLCRGRDNLQRAADSLTDAVMIRSDLSCNWKLLGDVCYKVATMPEKYRYLR
VKPILMKRDSAENYVSIKGDEILMLSARCFCRALSITQNSALLWHDLASCYYVQLHRDSA
LDKNDAAAKCLAAAKHAVKLSPQSWLHWNILGVICMSSHVKNYALAQHCFVMAIDREANN
AVAWSNLGTLYLHLGDLYKGNEAFSRAQRADPSYMSSWIGQGLIAEISYRREAMELFRHS
TLLGYHNQAALAYAHWVLTTLLNPAFKRDPLCVYFIEKMHAIDAAVDVLTWYTEHEPKDI
YALNTYGLLLERQKLYNTAVKQFAAALELSEDKERDMISVNLARVLIQVGKHEEAVELCR
QVKSASFNCQCHLALALFKAKEYEESYNAYEAALHWLAVTGAHKGSVLCAMAAIAHMFQG
ADAVKTLLFQCIQIEPPTVAGLLATAALGILHDDANLTSLVLKELKPYENHHEYGHHAVT
LSAYHRVTRGDLVEAIRTFTKAIMRRPDDIRHWIRLVRISLLNPNLDIFRKCARTALVLS
RNTSMTDIVYVACASAYSHFGTTEGLRQAQKNIFTYPANVESWGSFIAAVLPRCAKEDPK
LDNQWLLSLISTVRSQFQTSRHMSDWLLRNAQEIAARSS
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgagataaaagctttgctgaaggaagctcgggaatccttcaagcggaatgaa
catctggaagctatgaaaaaatgcaagaaggttttgaagaaggataaaaacaattacacg
gcattagttttgttagcacgagccatgcaagaggtggaggaatttaaatcacaggtggtc
ttggttctccaaaaagccacggagattcaaccaaacaatccattggcttggcagggttta
gtggtgtactatgagaaagcatcacaggacgataacaattggagaaagttggctacagct
tactgcaaacttttacagttggacagtgattctcccaaattcacgcattttataaataag
gtttctgagatcgttctgcggattaaggacgacgaggtactgtcagaagtgttgaccaca
ctgagcacgctacgggaagtttctgctgaggaaaggacgagcttgatcgataagacactg
gcttgggttttaacagagtatcccagtagtggtgtcaaaaaccatcaggagctctatgaa
gacatattggcgtccgttataaaagatacagacctaatgaataggcaagagtattacaga
aggtatctgaaagcgctgtacgattcaaataaatacacagttttgttaacagcggctgag
gacatgcacgctcagtttccacaggatgctcagtccctagaatggatctgccgtgtctat
tacgaggaagctatactaaatggacacgagctcggagtaaacgtaacatacttttacgag
tctctcttgaagctgatcgcgaactccgagatcgcgttgatcgcgaaagcggcttatttt
aagagtgcaaatgagttaatcagctcacgggagtgcttgaatcaagtgatcgcggtaaat
gtgcggtcattttacgcttggttaacgttgagccaagtgtattgcaagctctactgctgg
gaggaggccgagaatgcttctagacaagcgctgcaattaatgaagtccaatttgaaagag
aaattgtgtcgcagagttaaattgagattactcgaggcgatgagccgaagcggtagtaaa
caaaagttgctacaagcgcgacagatgtgtgaagagttattgaacatcgaatcttccgta
caattgcaagtgataaatgtgcgagtaaacgtatcgctggacgagcccgacgctgtcgcc
gcattaagcgtcttggagtctcaggatgagaccaaaatccaggcgtttattctcaaagca
ttgcatctaatgaaacgcgagcaatacgaggaagctattaacgccctcgagttggcgcta
gagagctctgaagcctggctgttgttcggtaaaatttattggcacatgggagactacaat
cacagcctgatggcatttctaaatggcttccgggcggatcgcaataattgggagtgcatg
atttacctgggccactattaccgcgagcatggcaacgacatagaacgttcgaggaggtgt
taccacgccgcgttgcagatcaatccgaattccgaggaggctggcatcggattgagcaca
gcttatcgtcttctcaagaacaccgaggctaacatgcagctattgcaaagggtaaccatg
cagagtaccgggccgaagtgggcctggctgcaattgggcctacatcacttggatcaaggc
gatgcgggacaggccatcaaagcgttacagcacgtgatcagaaccgatcctaacgacaat
cacagttgggaatctctggcggacgcgtacttagtgggcggcgctcacgtgtcggcactg
aaatcgtatcaacgcgcgctacagctaagcccaggatccctctatccgataatacaactt
gcaaatatcaaacttctcatcggccaacacaaggaagccagggaggatttcgagaacata
ttggaaaacgataagcaatacatccccgcgctgaaaggcttggcccaagcgtgtttgggt
ctggcgagggagaacatttcgagacagcttctgtgtcgcggccgagataatctgcaacga
gcagccgacagcctcacggacgccgttatgatacgctctgatctgtcttgcaattggaaa
ctgctcggcgacgtgtgctataaagtagccactatgccagagaagtatcgttacttgaga
gtcaagccgattttaatgaaacgcgacagcgcggaaaactatgtgagcattaaaggggat
gaaatactgatgttatcggcgagatgcttctgtcgggcgctctcgatcacgcagaattcc
gcgttgttgtggcacgacttagcgtcctgttactacgtgcagctgcatcgcgattccgcg
ctcgacaagaatgacgcagcggccaagtgtctcgccgctgcgaaacacgccgtgaaactg
tccccgcaatcttggctgcattggaacatcctgggcgtgatctgcatgtcgtcccacgtc
aaaaattacgccttggctcagcactgtttcgttatggcgatcgacagggaggcgaacaac
gcggtagcgtggagtaatctgggaacactgtatctgcacttgggagatctgtacaagggg
aatgaggcattttctcgagcccaacgcgcggatcccagttacatgagcagctggatcggt
caaggattaatcgccgagatatcttataggagggaagcgatggaactgtttcggcactcg
acgctactgggctaccataatcaagcggctctagcctacgctcactgggtacttaccact
cttctgaaccctgcgttcaaaagagacccgttgtgtgtttacttcatcgagaagatgcac
gcgatagatgcagcggttgatgtcctcacttggtacacagaacacgagccgaaggatatt
tacgctctgaacacctacggtttgttgctggaacgacagaaattgtacaacacagcagtc
aagcagttcgccgcggctttagagctcagcgaggataaggagagagacatgatatccgtg
aacctggcacgtgttctgatacaagtcgggaagcatgaggaggcggtagagttgtgcaga
caagtaaaatcagcgagtttcaactgccagtgtcacctggcactagccttgttcaaagcg
aaagagtacgaagaatcgtacaacgcgtacgaagcggcattacactggctggcggtcacc
ggagcgcacaaggggagcgtcctgtgcgcgatggctgcgattgcccacatgttccaaggg
gcagacgcggtgaagaccctgctgttccagtgtatacagatagaaccgccgaccgtggcc
gggctcttggccactgccgcgttaggcatcttgcacgatgatgccaatctgacgtcgttg
gtactgaaggaactgaaaccgtacgagaatcatcacgagtacggccatcacgccgtcacg
ttgtccgcgtatcatcgcgtcactcggggagatctcgtcgaggccattcgaaccttcacc
aaagctattatgcgacgtccagatgacatcagacactggatacgtctcgttaggatttcc
ttgctgaatccaaacctggatatcttccggaaatgcgcacggacggcactggtcctaagt
aggaacacgtccatgaccgatatcgtgtacgtcgcttgcgcctcagcgtacagccacttc
ggcacgacggagggactcagacaggctcagaaaaatatatttacatatcctgccaacgtt
gagagctggggcagttttatcgctgccgttctacctagatgcgcgaaggaggatcctaag
cttgataaccaatggttattatcgttaatatctacagtacgatcgcagtttcaaacttcc
agacacatgtcagactggttgctgcgtaacgcgcaagagattgcggctcgcagctcgtaa
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