Ooceraea biroi (clonal raider ant): 105285619
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Entry
105285619 CDS
T05778
Name
(RefSeq) sodium channel protein para isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
obo04040
]
105285619
Ion channels [BR:
obo04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105285619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
SieB
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
105285619
NCBI-ProteinID:
XP_026827701
LinkDB
All DBs
Position
8:15265850..15309837
Genome browser
AA seq
2065 aa
AA seq
DB search
MSEDSDSISEEERSLFRPFTRESLAAIEARIAEEEAKQRELEKKRAEGEVRYDDEDEDEG
PQPDPMFEQGAPIPVRLHNEFPSELASTPLEDIDSFYHNQRTFVVISKGKDIFRFSATNA
MWLLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTIESTEVIFTGIYTFE
SAVKVMARGFILQPFTYLRDAWNWLDFVVITLAYVTMGIDLGNLAALRTFRVLRALKTVA
IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIKNFPEDGSWG
NLTDENWKRFVSNETNWYMDEAKNIPLCGNISGAGQCLPGYTCLQGYGTNPNYGYTSFDT
FGWALLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYD
ELQKKAEEEEAAEEEAMREAEEAALAKENKLAAQAAAREAAAAAAVAAEQIVKSPSDFSC
HSYESFVGQEKGNDDNNKEKMSIRSIESASDPRHLKQINNNHSAANKVRKVSAVPRAANG
QFTYAYQESLRKASLSLPGSPFNLRRSSRGSHQFTIRNGRGRCFVPPGGDRKPLVLSTYL
DAQEHLPYADDSNAVTPMSEENGTIVVPVYYANLGSRHSSYTSHASRLSYTSHGDLAFPG
IRGIDSIGKQITKQEQILRNRNNKQTTPANGHVTDTNQKYHFEADLEDPMGKTKQQDNPF
IEPSQQHAVVDMKDVMVLNDIIEQAAGRQSQTPEQGVSTYYFPTDDDEEEPTFKDKLVAG
MFRCIDIFCVWDCCWLWLEFQKYVSFLVFDPFVELFITLCIVVNTLFMALDHHDMDKDME
RVLKSGNYFFTATFGIEATLKLVAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSV
LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYT
DNVDRFPDGDLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMLVGDVSCIPFFLATVVIG
NLVVLNLFLALLLSNFGSSNLSAPTADNDTNKIAEAIDRIARFIKWIKQNILNVLKLMRA
KLTNQISDQAPGEGPSNSWKEEILCDCADGIDRDGDLDLADGELDAYRDKKSAKELNQLE
VAIGDGMEFTIHGDLKNKLKRGKLCMNNTKVIANSINHHDYRLDNDYINQNEDDTISNKS
YGSHKNRAFKDESHKGSMDSLNGEEKKDASKEDLEQEEDLEDEGEEGEELDGEIIHAEDD
PIQSNYPTDCCPENCYKKFPFLAGDDDAPFWQGWANLRLKTFQLIENKYFETAVITMILL
SSLALALEDVHLQQRPILQDILYYMDKIFTVIFFIEMLIKWLALGFRKYFTNAWCWLDFI
IVMVSLINFLASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNV
LLVCLIFWLIFAIMGVQLFAGKYYKCVDVNKTTLSYEIIPDRNACYAENYTWENSPMNFD
HVGKAYLCLFQVATFKGWIQIMNDAIDSREVNKQPIRETNIYMYLYFVFFIIFGSFFTLN
LFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGNKKPLKAIPRPRWRPQAIVF
EIVTDKKFDMIIMLFIGLNMLTMTLDHYQQSTTFSNVLDYLNMIFIVIFTSECLMKIFAL
RYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKG
IRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDKSGLDDVYNFKTFGQSMI
LLFQMSTSAGWDSVLDGIINEENCQEPNNEIGYPGNCGSSTIGIAYLLSYLVISFLIVIN
MYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPDGTQYIRYDQLSDFLDVLEPPL
QIHKPNKYKIVSMDIPICKGDLMFCVDILDALTKDFFARKGNPIEETGDLGEVQARPDQV
GYEPVSSTLWRQREEYCARLIQNAWRKHKQQRQGGPSEESDDPDTDPRVRQTAVLVESDG
YVTKNGHRVVIHSRSPSVTSRTADV
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagattctgactctatatcagaggaagaaagaagtttgttccgtccgttcacg
cgggagtccctggcagcgatcgaggctcgcatcgccgaggaagaggccaagcagagggag
ctcgagaagaagagagcggaaggcgaggtacgatatgacgacgaggacgaggacgaaggt
cctcagccggatccgatgttcgagcagggagcgccgatcccggtccgactgcacaacgaa
tttccatccgagttggcctccacacctctcgaggatattgatagcttctaccataatcaa
aggaccttcgtcgtcattagcaagggaaaggacatattcaggttctcagcgacgaatgcg
atgtggttgctcgacccgttcaaccctatacgacgtgtggccatttacatattggttcac
ccgctcttttccctcttcatcatcactacgatattggttaactgtatactcatgatcatg
cccaccacgcccaccatcgagtccaccgaagtgatatttacgggcatctacacatttgag
tccgccgttaaggtgatggcgaggggtttcattctgcaaccttttacctatcttagagat
gcatggaattggctcgacttcgtagttataactttagcttatgtgacgatgggcatagat
ctaggcaaccttgccgctctcaggacatttcgagtcctccgagccttgaagactgtcgct
attgtaccaggtctgaaaaccattgtcggcgctgtgatagaatccgtgaagaacctgcgt
gatgtgataatcctgacgatgttctccctctccgtctttgcgctgatgggccttcagatt
tacatgggggtcctcacgcaaaagtgtataaagaactttcctgaggacggctcctggggt
aatctcaccgacgaaaattggaagcggtttgttagtaatgaaactaattggtacatggac
gaagctaaaaatataccgttgtgcggaaatatttcgggggcggggcagtgccttcccggc
tacacgtgtttacaagggtacggcactaatccgaattatggctacacgagcttcgacacc
ttcggttgggcattgctctccgcctttcgtcttatgacacaggactactgggagaatctg
taccaactggtgctacgatcggccggaccgtggcatatgctcttctttatcgtaatcatc
ttcctcggatccttctatcttgtgaacttgatcctcgctattgtcgcgatgtcgtacgac
gaattgcaaaagaaagctgaggaggaagaagccgccgaggaagaggccatgagagaagcc
gaagaggctgcactcgcaaaagagaataagctcgcagcgcaggccgcggcacgggaagcc
gcagccgcggcagcagtcgccgcggagcaaattgttaagtctccttcggatttctcatgt
cacagttacgaatcgttcgttggtcaagagaaaggcaacgacgacaacaataaagagaag
atgagcatacggtcgatcgagtccgctagcgatccgaggcacctcaagcagatcaacaac
aaccacagcgctgccaataaagtgcggaaagtcagcgccgttcctcgcgccgctaatggc
cagtttacttatgcctaccaggaaagtctgcggaaggcgagcctgagcctacccggctca
ccgttcaatctgcgtcgcagcagccgtggcagccaccagttcacgatacggaatggtcga
ggcaggtgtttcgtgcctccgggtggcgaccggaagcccctcgtgctgtcgacgtacctg
gacgcccaggagcacctaccctacgccgacgactcgaacgcggtcacgccgatgtccgag
gagaacggcacgatcgtggtgccggtgtactacgcgaatctcggctcgcgtcattcatcc
tacacctcacacgcttcgcggctctcctacacgtcccacggcgacctggccttccccggt
atccgcggcatcgacagcatcggcaagcagatcaccaagcaggagcagatcctcaggaac
agaaacaacaagcagacgacgcctgccaacggccatgtcaccgacaccaatcagaagtac
catttcgaggccgatctggaggatcccatgggcaagaccaagcagcaagacaatccgttc
atcgagccatcgcagcagcacgccgtggtcgacatgaaggacgtgatggtgctgaacgac
atcatcgagcaggctgccggccgccagagccagacaccggagcaaggagtttcgacctat
tactttccgacagacgacgatgaagaagagcctacattcaaggacaagttagtggccgga
atgttccgttgtatcgacatcttttgcgtctgggactgctgttggctctggctcgagttt
cagaagtacgtgtccttcttggtctttgatccattcgtagaactcttcattacactctgc
atcgtcgtcaatacgctcttcatggcgttggatcaccacgacatggacaaagatatggag
cgagtgctcaaatccggcaattacttcttcacggcgacgttcggtatagaggcgaccctg
aagctggtagcgatgagcccgaaatattattttcaagagggttggaacatctttgatttc
atcatcgtcgctctctcgcttctggaactgggtttggaaggcgtgcaaggtctgtcggtc
ttacgatccttcagattgctgagagtgttcaagctggctaaatcgtggcctacgttgaat
ctgctgatttccatcatgggcagaacggtgggcgcgttgggtaatctaacgttcgtgttg
tgcattatcatcttcatcttcgccgtgatgggcatgcagctcttcggcaagaattacacc
gacaacgtcgaccgcttcccggacggcgacctgcctagatggaactttaccgatttcatg
cactcttttatgatcgttttccgcgtgttgtgcggagagtggatcgagtccatgtgggac
tgcatgctggtcggcgacgtctcctgcataccattcttcttggccaccgtcgtcatcggt
aacttggtcgtcctgaatctcttcttagctctgttgctcagcaacttcggctcgtcgaat
ctgtcagctccgactgcggacaacgacacgaacaagatcgcggaggcgatcgaccgaata
gcacgtttcattaaatggatcaagcaaaatattcttaacgtcttaaagttgatgcgagcc
aaactcaccaatcagatatccgatcaggcgccaggtgagggaccgtccaacagttggaaa
gaagagattttgtgtgactgtgcagatggaattgatcgcgatggggacctagatcttgca
gatggagaattggacgcgtacagagacaagaagagcgccaaagagctcaaccagcttgag
gttgcgattggcgacgggatggagtttactatccatggagatttgaaaaacaagctgaag
aggggcaagctgtgcatgaacaacacgaaagtcatcgcaaattcgataaaccaccacgat
tataggctggataacgattacattaatcagaacgaagatgacaccatcagtaacaaatcc
tatggcagccacaaaaaccgggcattcaaggacgagagtcacaagggcagcatggactcg
ctgaacggcgaggagaagaaagacgcgagtaaagaggatctcgagcaggaagaagatttg
gaagatgagggcgaagaaggagaggaacttgacggcgagatcatacacgcggaggacgat
cctattcaatcgaattaccccaccgactgctgcccggagaattgctacaagaagtttcca
tttttggccggcgatgacgacgcaccattctggcaaggctgggcgaacctgaggttgaag
acgttccagctgattgagaacaagtacttcgagactgccgtcattaccatgatccttctg
agtagcttggccttggctttggaggacgttcatcttcaacaacgacctatactgcaggac
atattgtactatatggacaaaatattcactgtgatcttcttcatcgagatgttgatcaag
tggctggctctagggttcaggaaatatttcactaatgcctggtgttggctcgactttatc
atcgtcatggtatcgctcattaacttcctagcgtcgctctgtggcgctggcgggattcaa
gccttcaaaacaatgcggaccctaagggccctaaggccactcagggcgatgtctagaatg
caggggatgcgggtagtcgttaacgctttggtccaagccattccatccatcttcaacgta
ttgctggtatgccttattttctggcttatattcgctatcatgggggtgcagctatttgct
ggcaaatattataagtgtgttgacgtgaacaagacgacactcagctacgagataataccg
gaccgtaacgcctgctacgcggagaattacacgtgggagaactcgccgatgaacttcgac
cacgtcggcaaagcgtacctgtgcctattccaagtggcgactttcaaaggatggatccag
atcatgaacgacgcgatcgactctagggaggtgaacaagcagccgattcgtgaaacgaac
atttacatgtatctctacttcgtgtttttcattatatttggatcgttttttactctcaac
ctgttcatcggagtgatcatcgataactttaacgagcagaagaagaaggccggcggctcc
ctcgagatgttcatgacggaagatcagaagaaatactacaatgccatgaagaaaatgggc
aataagaagcctctgaaagccattcctcgaccaaggtggcggccgcaggcgatagtgttt
gaaatagtgacggacaaaaagttcgatatgataatcatgctgttcatcgggctgaacatg
ctcacgatgacactggaccattatcaacagagcacaacgttcagcaacgttctggactat
ctcaacatgatattcattgtgatattcaccagcgagtgtctcatgaagatcttcgcgctg
cgttaccactacttcaaggagccgtggaacctctttgattttgttgttgttatattgtca
atattaggtctggtgctcagcgacattattgagaaatacttcgtgtcaccgacattgctt
cgcgtagtgagggtggcaaaggtcggtcgtgtgcttcgactcgtgaaaggtgccaagggt
attcgaacccttctcttcgccctggcgatgtcgttgccagccctcttcaatatttgccta
ctgctgtttttggtgatgttcatcttcgcgatattcgggatgtctttcttcatgcacgtc
aaggacaagagcggactggacgacgtgtacaacttcaagacgtttggacagtcgatgata
ctgctgtttcagatgtcaacgtcggctggttgggacagcgttctcgacggtataataaac
gaggaaaactgccaggagccgaacaacgagatcggctatccgggcaactgcggctcctcg
acaatcgggatcgcttatctgctctcgtacctcgtgatcagctttctgatcgtcattaac
atgtacatcgccgtgatcctcgagaattactcgcaggcgaccgaagatgtgcaggaaggc
ctgacggacgacgattatgacatgtactacgagatctggcagcaatttgacccagacggc
acgcaatatatcagatatgaccagttgtcagacttcctagacgtattggaacccccgttg
cagatacacaagcccaataaatataagatcgtgtcgatggatatccccatatgtaaggga
gaccttatgttttgcgtggatatcctcgatgccctcactaaggacttttttgcgcggaag
ggtaatccaatcgaagagacaggcgatctgggagaggtacaggcgcggccggaccaggtt
ggttacgaaccggtctcgtccactctctggcggcagcgcgaggaatattgcgcccgtctg
atacagaacgcctggcggaagcacaagcagcaacgtcagggtgggccgagcgaggagagc
gacgatccggacacggacccgcgggtccggcagaccgcggtgttggtcgagagcgacggt
tacgtcacgaagaatggtcaccgcgtcgtcattcacagccgatcgccgagcgtcacctcg
agaactgcggacgtctga
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integrated database retrieval system
