KEGG   Oryza brachyantha (malo sina): 102702351
Entry
102702351         CDS       T02995                                 
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr04120  Ubiquitin mediated proteolysis
obr04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102702351
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    102702351
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:obr04121]
    102702351
Enzymes [BR:obr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102702351
Ubiquitin system [BR:obr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102702351
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     102702351
SSDB
Motif
Pfam: WD40 zf-C3HC4_2 zf-C3HC4 WD40_like zf-C3HC4_3 zf-RING_2 zf-C3HC4_4 zf-RING_UBOX zf-RING_5 U-box zf-rbx1 zf-RING_10
Other DBs
NCBI-GeneID: 102702351
NCBI-ProteinID: XP_006647974
UniProt: J3LHH9
LinkDB
Position
2:complement(24779192..24785341)
AA seq 688 aa
MGDSSVAGALVPSVPKQEPAPSGDASTAAPAAGAGAGAEEEEAGARASAAGDGEAMADRD
LLCPICMAVIKDAFLTSCGHSFCYMCIVTHLSHKSDCPCCGNYLTKAQLYPNFLLDKVLK
KMSARQIAKTASPVDQFRYALQQGNDMAIKELDSLMTLIAEKKRHMEQQESETNMQILLV
FLHCLRKQKLEELNEIQTDLQYIKEDISAVERHRLELYRTKERYSMKLRMLLDDPAASKM
WPSPMDKPSSFFPPNSRGPLSTSNPGVLQNKKLELKGQMSHQGFQRRDVLTCSDPPSAPI
QSGNVIARKRRVQAQFNELQEYYLQRRRTGAQSRRLEERDIVTMNKEGYHAGLEDFQSVL
TTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEP
SDVHCPVVEMATRSKLSCLSWNKYSKNVIASSDYEGIVTVWDVQTRQSVMEYEEHEKRAW
SVDFSRTEPSMLVSGSDDCKVKVWCTKQEASAINIDMKANICSVKYNPGSSHYVAVGSAD
HHIHYFDLRNPSTPVHVFGGHKKAVSYVKFLSTNELASASTDSTLRLWDVKENCPVRTFR
GHKNEKNFVGLSVNNEYIACGSETNEVFVYHKAISKPAANHRFVASDLDDADDDPGSYFI
SAVCWKSDSPTMLTANSQGTIKVLVLAP
NT seq 2067 nt   +upstreamnt  +downstreamnt
atgggtgactcatcggtggccggggcgctcgtgccgtccgtgcccaagcaggagcccgcg
ccgtccggggacgcgtccacggccgcccccgcggcgggggcgggggcgggggcggaggag
gaggaggccggggcgcgcgcctccgccgcgggggacggggaggccatggccgacagggac
ctcctctgtccgatctgcatggccgtcatcaaggacgccttcctcacctcctgtggccac
agcttctgctacatgtgcatcgtcacgcacctcagccacaagagcgattgcccctgctgc
gggaactacctcaccaaggcgcagctctaccccaacttcctcctcgacaaggtcttgaag
aaaatgtcggctcgccaaattgcaaagacagcatcaccggttgaccaatttcgatatgca
ctccaacagggcaacgatatggcgattaaagaactagacagtcttatgactttgatcgcg
gagaagaagaggcatatggaacaacaagagtcagaaacaaatatgcaaatattgctagta
ttcttgcactgcctcagaaagcagaagttggaagagttgaatgagattcaaactgaccta
cagtacatcaaagaagatataagtgctgtggagagacataggttagaattatatcgaaca
aaagaaaggtactccatgaagctccgcatgcttttggatgatcctgctgcatcaaagatg
tggccctcgcctatggataaacctagcagcttctttcctcccaactcccggggaccactt
agtacatcaaatccaggggttttacagaataagaagcttgaattgaaaggtcaaatgagc
catcaaggatttcaaaggagagatgttctcacttgctcagaccctcctagtgcccctata
caatcaggcaatgttattgctcggaagaggcgggttcaagctcagtttaatgagcttcaa
gaatactatctgcaaagacggcgtactggagcacaatcacgtagactggaggaaagagac
atagttacaatgaataaagaaggttatcatgcaggacttgaggatttccagtcggtgcta
acaacattcacgcgatacagtcgcttacgtgtaattgcggaactaagacatggagatctg
tttcattctgcaaacattgtatcaagtatcgaatttgatcgtgatgatgagctatttgct
accgctggagtctcaaagcgcatcaaagtctttgagttttctacagttgttaatgaacca
tcagatgtgcattgcccagttgttgaaatggctactagatctaagctcagctgccttagc
tggaacaagtactcaaaaaatgttatagcaagcagtgactatgagggtatagttactgtt
tgggacgtccaaacccgccagagtgtgatggagtatgaagaacatgaaaagagagcatgg
agtgtcgatttttctcgtacagaaccctcaatgctagtatctgggagtgatgattgtaag
gtcaaagtgtggtgcacaaagcaagaagcaagtgccatcaatattgatatgaaggctaat
atttgctctgtcaaatataatcctgggtcaagccactatgttgcagtgggttctgctgat
caccatattcattactttgatttgcgaaatccaagtacacctgtgcatgtttttggtggg
cacaagaaagctgtttcttatgtgaagttcctatccaccaatgagcttgcatctgcctca
accgatagcacattacggttatgggatgtcaaggaaaattgccctgtaaggacattcagg
gggcacaagaatgaaaagaattttgttggactgtctgtaaataacgagtacattgcctgt
gggagtgaaacaaatgaggtttttgtttaccacaaggctatctcaaaacctgccgccaac
cacagatttgtagcatctgatcttgatgatgcagatgacgatcctggctcttattttatt
agcgcagtctgctggaagagcgatagccctaccatgttaactgctaacagtcaaggcacc
attaaagttcttgtgcttgctccctga

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