Oryza brachyantha (malo sina): 102702351
Help
Entry
102702351 CDS
T02995
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04120
Ubiquitin mediated proteolysis
obr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102702351
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
102702351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obr04121
]
102702351
Enzymes [BR:
obr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102702351
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102702351
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
102702351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
zf-C3HC4_2
zf-C3HC4
WD40_like
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_5
U-box
zf-rbx1
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
102702351
NCBI-ProteinID:
XP_006647974
UniProt:
J3LHH9
LinkDB
All DBs
Position
2:complement(24779192..24785341)
Genome browser
AA seq
688 aa
AA seq
DB search
MGDSSVAGALVPSVPKQEPAPSGDASTAAPAAGAGAGAEEEEAGARASAAGDGEAMADRD
LLCPICMAVIKDAFLTSCGHSFCYMCIVTHLSHKSDCPCCGNYLTKAQLYPNFLLDKVLK
KMSARQIAKTASPVDQFRYALQQGNDMAIKELDSLMTLIAEKKRHMEQQESETNMQILLV
FLHCLRKQKLEELNEIQTDLQYIKEDISAVERHRLELYRTKERYSMKLRMLLDDPAASKM
WPSPMDKPSSFFPPNSRGPLSTSNPGVLQNKKLELKGQMSHQGFQRRDVLTCSDPPSAPI
QSGNVIARKRRVQAQFNELQEYYLQRRRTGAQSRRLEERDIVTMNKEGYHAGLEDFQSVL
TTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEP
SDVHCPVVEMATRSKLSCLSWNKYSKNVIASSDYEGIVTVWDVQTRQSVMEYEEHEKRAW
SVDFSRTEPSMLVSGSDDCKVKVWCTKQEASAINIDMKANICSVKYNPGSSHYVAVGSAD
HHIHYFDLRNPSTPVHVFGGHKKAVSYVKFLSTNELASASTDSTLRLWDVKENCPVRTFR
GHKNEKNFVGLSVNNEYIACGSETNEVFVYHKAISKPAANHRFVASDLDDADDDPGSYFI
SAVCWKSDSPTMLTANSQGTIKVLVLAP
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgggtgactcatcggtggccggggcgctcgtgccgtccgtgcccaagcaggagcccgcg
ccgtccggggacgcgtccacggccgcccccgcggcgggggcgggggcgggggcggaggag
gaggaggccggggcgcgcgcctccgccgcgggggacggggaggccatggccgacagggac
ctcctctgtccgatctgcatggccgtcatcaaggacgccttcctcacctcctgtggccac
agcttctgctacatgtgcatcgtcacgcacctcagccacaagagcgattgcccctgctgc
gggaactacctcaccaaggcgcagctctaccccaacttcctcctcgacaaggtcttgaag
aaaatgtcggctcgccaaattgcaaagacagcatcaccggttgaccaatttcgatatgca
ctccaacagggcaacgatatggcgattaaagaactagacagtcttatgactttgatcgcg
gagaagaagaggcatatggaacaacaagagtcagaaacaaatatgcaaatattgctagta
ttcttgcactgcctcagaaagcagaagttggaagagttgaatgagattcaaactgaccta
cagtacatcaaagaagatataagtgctgtggagagacataggttagaattatatcgaaca
aaagaaaggtactccatgaagctccgcatgcttttggatgatcctgctgcatcaaagatg
tggccctcgcctatggataaacctagcagcttctttcctcccaactcccggggaccactt
agtacatcaaatccaggggttttacagaataagaagcttgaattgaaaggtcaaatgagc
catcaaggatttcaaaggagagatgttctcacttgctcagaccctcctagtgcccctata
caatcaggcaatgttattgctcggaagaggcgggttcaagctcagtttaatgagcttcaa
gaatactatctgcaaagacggcgtactggagcacaatcacgtagactggaggaaagagac
atagttacaatgaataaagaaggttatcatgcaggacttgaggatttccagtcggtgcta
acaacattcacgcgatacagtcgcttacgtgtaattgcggaactaagacatggagatctg
tttcattctgcaaacattgtatcaagtatcgaatttgatcgtgatgatgagctatttgct
accgctggagtctcaaagcgcatcaaagtctttgagttttctacagttgttaatgaacca
tcagatgtgcattgcccagttgttgaaatggctactagatctaagctcagctgccttagc
tggaacaagtactcaaaaaatgttatagcaagcagtgactatgagggtatagttactgtt
tgggacgtccaaacccgccagagtgtgatggagtatgaagaacatgaaaagagagcatgg
agtgtcgatttttctcgtacagaaccctcaatgctagtatctgggagtgatgattgtaag
gtcaaagtgtggtgcacaaagcaagaagcaagtgccatcaatattgatatgaaggctaat
atttgctctgtcaaatataatcctgggtcaagccactatgttgcagtgggttctgctgat
caccatattcattactttgatttgcgaaatccaagtacacctgtgcatgtttttggtggg
cacaagaaagctgtttcttatgtgaagttcctatccaccaatgagcttgcatctgcctca
accgatagcacattacggttatgggatgtcaaggaaaattgccctgtaaggacattcagg
gggcacaagaatgaaaagaattttgttggactgtctgtaaataacgagtacattgcctgt
gggagtgaaacaaatgaggtttttgtttaccacaaggctatctcaaaacctgccgccaac
cacagatttgtagcatctgatcttgatgatgcagatgacgatcctggctcttattttatt
agcgcagtctgctggaagagcgatagccctaccatgttaactgctaacagtcaaggcacc
attaaagttcttgtgcttgctccctga
DBGET
integrated database retrieval system