Oryza brachyantha (malo sina): 102704386
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Entry
102704386 CDS
T02995
Name
(RefSeq) cellulose synthase-like protein D4
KO
K00770
1,4-beta-D-xylan synthase [EC:
2.4.2.24
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr00520
Amino sugar and nucleotide sugar metabolism
obr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
102704386
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
obr01003
]
102704386
Enzymes [BR:
obr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.24 1,4-beta-D-xylan synthase
102704386
Glycosyltransferases [BR:
obr01003
]
Polysaccharide
Structural polysaccharide
102704386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_tranf_2_3
Glycos_transf_2
Baculo_IE-1
zf-UDP
Motif
Other DBs
NCBI-GeneID:
102704386
NCBI-ProteinID:
XP_040385753
LinkDB
All DBs
Position
12:complement(13596084..13600336)
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AA seq
1213 aa
AA seq
DB search
MSRRLSLPAGAPVTVAVSPVRSPGGDGVVRRGSGLTSPVPRHSLGSSTATLQVSPVRRSG
GSRYAAGASRDGVEESAEFVHYTVHIPPTPERGASVASEAAGEEVHRPQRSYISGTIFTG
GLNCATRGHVLDLSSGAGGRPAASGNMSCKMRGCDMPAFLDAGRPPCDCGFMICKECYAE
CVAAAGNCPGCKEAFSSAGSDTDSATSDDDEAVSSSEERDHLPLTSMARKFSVVHSMKVP
GAGAGAGKPAEFDHARWLFETKGTYGYGNALWPKDGHAAGATNGFVGVDEPPNFGARCRR
PLTRKTSISQAILSPYRLLIAIRMVALGFFLSWRIRHPNPEAVWLWAMSVACEVWFAFSW
LLDSLPKLCPVHRAADLAVLAERFESPTARNPKGRSDLPGIDVFVTSADPEKEPPLVTAN
TVLSILAADYPVEKLACYLSDDGGALLSFEALAETASFARTWVPFCRKHGVEPRCPEAYF
GQKRDFLKNKVRVDFVRERRKVKREYDEFKVRVNSLPEAIRRRSDAYNAGEELRTRRRQQ
EEAAAAAGSELGGAAAAAVPETAAVKATWMSDGSHWPGTWTSPAPDHSRGDHAGIIQAML
APPTSEPVLGGEAADCGGLIDTTGVDVRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSA
IMSNGPFILNLDCDHYVHNSAALREGMCFMLDRGGDRVCFVQFPQRFEGIDPSDRYANHN
LVFFDVSMRAMDGLQGPMYVGTGCVFRRTALYGFSPPRATEHHGWLGRRKIKLFLTKKKS
MGKKTDRREDDTEMMLPPIEDDNGRPLGGGGGGGDIESAAVLPKRFGGSATFVASIPVAE
YQGRLLQDTPGCHHGRPAGALAVPREPLDAATVAEAISVISCFYEEKTEWGRRIGWIYGS
VTEDVVTGYRMHNRGWRSVYCVTRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNA
LFASPRMKLLQRVAYFNAGMYPFTSVFLLVYCLLPAVSLFSGKFIVQHLSATFLVFLLVI
TLTLCLLALLEIKWSGITLHEWWRNEQFWVIGGTSAHPAAVLQGLLKVVAGVDISFTLTS
KPTNDGGAGGAGAGGEDDAFAELYEVRWSFLMVPPVTIMMVNAVAIAVAAARTLYSEFPQ
WSKLLGGAFFSFWVLCHLYPFAKGLLGRRGRVPTIVFVWSGLISMIISLLWVYISPPAGA
RERIGGGGGFSFP
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggcggctgtcgttgccggcgggggcgccggtgacggtggcggtgtcgccggta
aggagccccgggggggatggggtggtgaggagggggagcgggctgacgagccccgtgccg
aggcactcgctcgggtcgtccacggcgacgctgcaggtgtcgccggtgaggcggagcggc
gggagccggtacgccgccggcgcgtcgagggacggcgtggaggagagcgccgagttcgtg
cactacaccgtgcacatcccgcccaccccggagaggggggcgtccgtcgcgagcgaggcg
gcgggggaggaggtgcaccggccgcagaggagctacatctccgggacgatcttcaccggc
gggctcaactgcgccacgcgcggccacgtgctggatctctcctccggcgcgggcggcagg
ccggcggcgtccgggaacatgtcgtgcaagatgcgcggctgcgacatgccggccttcctc
gacgccggccgcccgccgtgcgactgcgggttcatgatctgcaaggagtgctacgcggag
tgcgtcgccgccgccggcaactgccccggctgcaaggaggccttctcctcggccgggagc
gacaccgactccgccacctccgacgacgacgaggccgtctcctcctcggaggagagggac
catctgccgctcacctccatggcgaggaagttctccgtggtgcactccatgaaggtcccc
ggcgccggcgccggcgccggcaagccggccgagttcgaccacgcccgctggctcttcgag
accaagggcacctacggctacggcaacgctctctggcccaaggacggccacgccgccggc
gccaccaacggcttcgtcggcgtcgacgagccccccaacttcggcgcccgctgccgccgc
cccctcacccgcaagaccagcatctcccaggccatccttagcccttacaggttgttgatt
gcgattcggatggtggcgctggggttcttcctctcgtggcggattcgccacccgaatccg
gaggcggtgtggctgtgggcgatgtcggtggcgtgcgaggtgtggttcgccttctcgtgg
ctgctcgacagcctccccaagctctgccccgtccaccgcgccgccgacctggccgtcctc
gccgagcggttcgagtccccgaccgcgcggaaccccaagggccggtccgacctccccggc
atcgacgtgttcgtcaccagcgccgacccggagaaggagccgccgctggtcaccgcgaac
accgtgctctccatcctcgccgcggactaccccgtcgagaagctggcgtgctacctctcc
gacgacggcggcgcgctcctgtcgttcgaggcgctcgccgagacggccagcttcgcgcgc
acgtgggtgcccttctgccgcaagcacggcgtcgagccgcggtgccccgaggcgtacttt
ggccagaagagggacttcctcaagaacaaggtgcgcgtcgacttcgtccgcgagaggcgc
aaggtgaagcgcgagtacgacgagttcaaggtgcgggtgaactcgctgccggaggcgatc
cggcggcgctccgacgcgtacaacgccggcgaggagctgcgcaccaggaggcggcagcag
gaggaggccgcggcggcggccggcagcgagctgggaggagcggcggctgcggcggttccc
gagaccgccgccgtcaaggccacctggatgtctgatggctcgcactggccggggacatgg
acgtcgcccgcgccggaccactcccgcggcgaccacgccggcatcatccaggcgatgctg
gcgccgccgacgtcggagcccgtgctgggaggcgaggcggcggattgcggcggcctgatc
gacaccaccggcgtggacgtccggctgccgatgctggtgtacgtgtcgcgggagaagcgg
ccggggtacgaccacaacaagaaggccggggcgatgaacgcgctggtgcggacgagcgcc
atcatgtcgaacgggccattcatcctcaacctcgactgcgaccactacgtgcacaactcg
gcggcgctccgggaggggatgtgcttcatgctcgaccgcggcggcgaccgcgtctgcttc
gtgcagttcccgcagcggttcgaggggatcgaccccagcgaccggtacgccaaccacaac
ctcgtcttcttcgacgtgtcgatgcgcgccatggacgggctccagggccccatgtacgtc
ggcaccggctgcgtgttccgccgcaccgcgctgtacggcttcagcccgccgcgcgccacc
gagcaccacggctggctcggccggaggaagatcaagctgttcctcaccaagaagaagagc
atgggcaagaagacggacaggagggaggacgacaccgagatgatgctaccgccgatcgag
gacgacaacgggaggcccctcggcggcggcggcggcggaggagatattgagtcggcggcg
gtgctgccgaagcggttcggcgggtcggcgacgttcgtggcgtcgatcccggtggcggag
taccaggggcggctgctgcaggacacgccggggtgccaccacggccgccccgccggcgcg
ctggccgtgccgcgggagccgctcgacgcggccaccgtggcggaggccatcagcgtgatc
tcctgcttctacgaggagaagacagagtgggggcggcgcatcgggtggatctacggctcc
gtcaccgaggacgtggtcaccggctaccggatgcacaaccgcgggtggcgctccgtctac
tgcgtgacgcggcgcgacgcgttccgcgggacggcgccgatcaacctcaccgaccgcctc
caccaggtgctccggtgggcgacgggctccgtcgagatcttcttctcgcgcaacaacgcg
ctcttcgcctcgccgcggatgaagctgctgcagcgcgtcgcctacttcaacgccggcatg
taccccttcacctccgtgttcctcctcgtctactgcctcctcccggccgtctccctcttc
tccggcaagttcatcgtgcagcacctcagcgcgaccttcctcgtcttcctcctcgtcatc
accctcaccctctgcctcctcgcgctgctcgagatcaagtggtcggggatcacgctgcac
gagtggtggcgcaacgagcagttctgggtgatcggcggcaccagcgcgcacccggccgcc
gtgctgcagggcctgctcaaggtggtcgccggcgtcgacatctccttcacgctgacgtcc
aagccgaccaacgacggcggcgccggcggcgccggcgccggcggcgaggacgacgcgttc
gcggagctctacgaggtgcggtggagcttcctgatggtgccgccggtgaccatcatgatg
gtgaacgccgtggcgatcgccgtggcggcggcgcggacgctgtacagcgagttcccgcag
tggagcaagctgctcggcggcgccttcttcagcttctgggtgctgtgccacctctacccg
ttcgccaagggcctcctcggccgccgcggccgcgtgccgaccatcgtcttcgtctggtcg
ggcctcatctccatgatcatctccctcctctgggtctacatcagcccgccggccggcgcc
cgggagcgcatcggtggcggcggcggcttcagcttcccctag
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