Oryza brachyantha (malo sina): 102704427
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Entry
102704427 CDS
T02995
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr00040
Pentose and glucuronate interconversions
obr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102704427
Enzymes [BR:
obr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102704427
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Cu-oxidase_2
Motif
Other DBs
NCBI-GeneID:
102704427
NCBI-ProteinID:
XP_040381177
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Position
6:15737982..15740139
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AA seq
446 aa
AA seq
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MEGFRWSKPAAGSLVLYAVFLLSAAATSEANIGDYDEHWQKRKLMADAAAEATYKRDPFE
VTNDFNRAVHRSEEKETARRSLMLSKRKKFAGPCKATNPIDRCWRCRDDWATDRKRLARC
AQGFGRNTTGGLAGKFYVVTDGTDDDVVNPRPGTLRWGVIQDEPLWIIFGKNMIINLKEE
LMIGNDKTVDGRGAQVRITNGAQVTVQNSNNVIIHNIHVHDIVLGKGGMIRDSPEHFGFR
TQSDGDGITIFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTNHNDVMLFGSSD
SFSEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKNPTIISQG
NRYIAPPNLAAKQITKQLGAEESEWKNWVWHSEEDLFMEGAYFTTSGGAIRTSINKKDLI
KPKPGSYVTRLTRFAGSIPCRPGKPC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggggttccggtggagcaagccggcggccggctccctggtgctgtacgccgtgttc
ttgctgtcggcggcggccacgtcggaggcgaacatcggcgactacgacgagcactggcag
aagcgtaagctcatggcggacgccgccgccgaggccacctacaagcgtgaccctttcgag
gtcaccaacgacttcaaccgcgccgtccacagatcggaggagaaggagacggcgaggagg
agcctgatgctgtcgaagaggaagaagttcgcggggccgtgcaaggcgacgaacccgatc
gaccggtgctggaggtgccgcgacgactgggcgacggacaggaagcggctggcgcggtgc
gcgcaggggttcgggcggaacacgaccggcgggctggccgggaagttctacgtggtgacg
gacgggacggacgacgacgtggtgaacccgcggccggggacgctgcggtggggggtgatc
caggacgagccgctgtggatcatcttcgggaagaacatgatcatcaacctgaaggaggag
ctgatgatcgggaacgacaagacggtggacgggcgcggggcgcaggtgcggatcaccaac
ggcgcgcaggtgacggtgcagaactccaacaacgtcatcatccacaacatccacgtccac
gacatcgtgctgggcaagggcggcatgatccgcgactcgccggagcacttcggcttccgc
acccagtccgacggcgacggcatcaccatcttcggctccaccaacgtgtggctcgaccac
ctctccctctccaactgccaggacggcctcatcgacgtcatcgccaagtccaccggcgtc
accatctccaactgccacctcaccaaccacaacgacgtcatgctcttcggctccagcgac
tccttctccgaggaccagatcatgcagatcaccgtcgccttcaaccacttcggccgcggc
ctcgtccagcgaatgccccgatgccgatggggattcttccatgtggtgaacaacgactac
acgcactggctgatgtacgccatcggggggagcaagaacccgacgatcatcagccagggg
aaccggtacatcgcgccgccgaacctggcggcgaagcagatcaccaagcagctcggggcg
gaggagtcggagtggaagaactgggtgtggcactcggaggaggacctgttcatggagggc
gcctacttcaccacctccggcggcgccatccgcaccagcatcaacaagaaggacctcatc
aagcccaagcccggctcctacgtcaccaggctcacgcgcttcgccggctccatcccctgc
aggcccggcaagccctgctag
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