Oryza brachyantha (malo sina): 102708803
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Entry
102708803 CDS
T02995
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr00040
Pentose and glucuronate interconversions
obr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102708803
Enzymes [BR:
obr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102708803
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
102708803
NCBI-ProteinID:
XP_040379755
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Position
5:complement(8076354..8079766)
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AA seq
386 aa
AA seq
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MVLVTFVCLFASFLAISSPCPLPINATADADAAPGCGTGNPIDDCWRCFPGWASNRQRLA
DCAPGFGRGAAGGKGGAVYVVNDSSDDAARPAPGTLRYGLVQEEPLWIVFAGDMTIRPAH
ELVVASRKTVDGRGARVVVGDGGACFAVRGARDVVIHGLTVRGCRPKPKLDAAAEAAASG
GSGKGGMSDGDGVCVHNSSDVWVDHCTLEDCADGLIDVVEGSTRVTLSNNLLRNHDKVML
LGHSDGYTQDKAMQVTVAFNRFGPGLVQRMPRCRFGLFHVINNDYIDWEMYAIGASASPT
IHSHGNRFSADIAKEVTKREGDVPESVWRNWNWLSDGDLMLNGAFFTASGKPGPDLKAPT
FARPSSSVPSMTASAGALSCDEASPC
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggttcttgtcacctttgtatgcttgttcgcctcatttttagccatttcatccccttgt
ccgttaccgatcaatgccactgctgatgctgatgctgcaccgggctgcggcaccggcaac
ccgatcgacgactgctggcgctgcttccccggctgggccagcaaccggcagcggctcgcc
gactgcgcccccgggttcgggcgcggcgctgccggcgggaagggcggcgcggtgtacgtc
gtgaacgactccagcgacgacgcggcgcggccggcccccgggacgctccgctacggcctc
gtccaggaggagcccctctggatcgtgttcgccggcgacatgaccatccgcccggcgcac
gagctggtggtcgcctcccgcaagaccgtcgatggccggggcgcccgcgtggtcgtcggc
gacggcggcgcgtgcttcgcagtgaggggcgcgcgcgacgtcgtcatccacgggctcacc
gtgcgcggctgccggccgaagccgaagctggacgcggcggcagaggcggcagcgagcggc
ggcagcggcaagggcggcatgtcggacggcgacggcgtctgcgtgcacaactcgagcgac
gtgtgggtggaccactgcacgctggaggactgcgccgacggcctgatcgacgtggtggaa
ggctccacgcgtgtgaccctgtccaacaacctcctgcggaaccacgacaaggtgatgctg
cttggccacagcgacggctacacccaggacaaggccatgcaggtcaccgtcgccttcaat
cgctttggccctggtctcgtccaaagaatgccaaggtgccggtttgggctcttccacgtc
atcaacaacgattacatagactgggaaatgtatgccattggggccagtgcttcaccgaca
attcatagccatggcaacagattctctgccgatatagccaaagaggtgaccaagcgggag
ggtgatgtgccggagagcgtgtggcgcaactggaactggctatccgacggcgacctgatg
ctcaacggcgcgttcttcacggcgtccggcaagccggggcccgacctcaaggcccctacc
ttcgccaggccttcctcgtctgtgccgtcgatgacggcctcggctggggctctctcctgc
gacgaggcctcaccttgctga
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