Oryza brachyantha (malo sina): 102709936
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Entry
102709936 CDS
T02995
Name
(RefSeq) formamidopyrimidine-DNA glycosylase-like
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102709936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obr03400
]
102709936
Enzymes [BR:
obr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
102709936
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
102709936
DNA repair and recombination proteins [BR:
obr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
102709936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
Motif
Other DBs
NCBI-GeneID:
102709936
NCBI-ProteinID:
XP_015693859
UniProt:
J3MG73
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All DBs
Position
6:complement(18088538..18091739)
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AA seq
398 aa
AA seq
DB search
MPELPEVEAARRALEAHCVGRRIARCAVADDAKVVVGVTRVAFERAMVGRTIVAARRRGK
NLWLRLDAPPFPSFQFGMAGAIYIKGVPVTQYKRSVVSSTDEWPSKYSKFFVELDDGLEF
SFTDKRRFARVRLFEDPEIVPPISELGSDALFEPMCVDTFADSLSGKKIGIKALLLDQSF
ISGIGNWIADEVLYQSRTHPLQIASSLSRESCEALHRSIQEVVKYAVEVDADCDRFPEEW
LFHHRWGKKPGKVNGKKIEFITAGGRTTAYVPQLQKLTGMQSASNKLVVSNPKQVAENDD
AKGIETDSEDADNTRKRVATSKAARGKQNSDAIGAGSRKRKNGGGKEKPSSDDGEDDTET
AELDIVSINSKGEIADPVTRRSSRNTSKPRQVFKSKGR
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctgccggaggtggaggcggcgaggagggcgctggaggcgcactgcgtgggg
aggaggatcgcgaggtgcgcggtggcggatgacgccaaggtggtcgtgggcgtcacgcgg
gtggcgttcgagcgcgccatggtcgggaggaccatcgtcgccgcgcgccggagggggaag
aacctctggctccgcctcgacgccccgccgttcccctccttccagttcgggatggcaggg
gcgatctacataaagggagttcctgtgactcagtacaagagatcagttgtcagttccaca
gatgagtggccctccaagtactccaaattttttgttgaacttgacgatggcttagagttt
tccttcaccgataagaggcgatttgcaagagttcggttatttgaagatccagaaattgta
cccccgatttccgagttaggatcagatgctctctttgagccaatgtgtgtcgacactttt
gcggactcactgagcggaaagaagattggaataaaagctcttttacttgatcagagcttc
atatcaggaatcggcaattggattgcagatgaggtgctttaccagtcgagaacccatcca
ttacagatagcttcaagtctatcaagggagagttgtgaagcactacatcgaagcatccaa
gaggttgtgaaatatgctgtcgaagttgatgctgattgtgaccgctttcctgaggaatgg
ttattccatcaccgatggggcaagaagcctggtaaagttaatggaaagaaaattgagttc
ataactgctggtggcaggactacagcttacgtgccacaactgcagaaactgactggaatg
caatctgctagtaacaaattagtagtttctaacccaaaacaagtggcagaaaacgatgat
gccaagggaatagagacagattcagaagacgctgataatacaaggaagcgagtagcaact
tccaaggctgcgaggggaaagcaaaacagcgatgctataggtgccggttccaggaaaagg
aaaaatgggggtggcaaggagaaaccaagcagtgacgatggtgaagatgatacggagact
gcggaactagacattgttagcatcaatagcaagggtgagatcgcagatcctgtgacaaga
agatcatcaaggaacacatcgaaaccgcgtcaagtatttaaatcaaaagggagatag
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