Oryza brachyantha (malo sina): 102720197
Help
Entry
102720197 CDS
T02995
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr00040
Pentose and glucuronate interconversions
obr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102720197
Enzymes [BR:
obr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102720197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
102720197
NCBI-ProteinID:
XP_006645983
LinkDB
All DBs
Position
1:complement(15373737..15375385)
Genome browser
AA seq
357 aa
AA seq
DB search
MGASCSTPFLTPASAAMAQHHHPPQPAPHPAAGPAMPYADADRTLRALAGAAEGFGRRAI
GGLHGPIYRVTSLEDDGHGTLRQACRAHGPLWIVFDVSGTIHLRSYLRVSSHKTIDGRGQ
RVRLAGKGLQLKECHHVIVCNLEIEGGRGHDVDAVQIKPASTDIWIDRCSLADCDDGLID
ITRGSTDITVSRCRFSRHDKTMLVGADPTHTGDRCIRVTIHHCFFDGTRQRHPRLRFGKA
HLYNNYTRGWGIYAAGAGVEAQIASQCNIYEAGEKKAVFRYVPEKAADRDEAEAGWIRSE
GDAFLNGARPCLVDGGPAVFRPEEYYDRWTMEAASPALKEVVQLCAGWQPVPRPPGE
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcctcctgctccacccccttcctcactcccgcctctgccgccatggcgcagcat
caccacccgccgcagcccgctccccatcccgcggccgggcccgccatgccctacgccgac
gccgaccgcaccctccgcgcgctggccggcgccgccgaggggttcggccgccgcgccatc
ggggggctccacggcccgatctaccgcgtcacctccctggaggacgacggccacggcacc
ctccgccaggcgtgccgcgcgcacggcccgctctggatcgtcttcgacgtctccggcacc
atccacctccgctcctacctccgggtctcctcccacaagaccatcgacgggcgcgggcag
cgggtgcgcctcgccgggaaggggctccagctcaaggagtgccaccacgtgatcgtctgc
aacctcgagatcgagggcgggcgcggccacgacgtggacgccgtccagatcaagccggcc
tccaccgacatctggatcgaccgctgcagcctcgccgactgcgacgacggcctcatcgac
atcacccggggcagcaccgacatcaccgtctccaggtgccggttctcccgccacgacaag
acgatgctggtcggcgccgacccgacccacaccggcgaccgctgcatccgggtcaccatc
caccactgcttcttcgacggcacgcggcagcgccacccgcggctccgcttcggcaaggcg
cacctgtacaacaactacaccagggggtggggcatctacgccgccggcgccggcgtggag
gcgcagatcgcgtcgcagtgcaacatctacgaggccggggagaagaaggcggtgttcagg
tacgtgccggagaaggcggccgaccgggacgaggcggaggccgggtggatcaggtcggag
ggcgacgcgttcctcaacggcgcgcggccgtgcctcgtggacggcgggccggcggtgttc
aggccggaggagtactacgacaggtggaccatggaggccgcgtcgccggcgctcaaggag
gtggtgcagctgtgcgccggatggcagcctgtgccgaggccaccgggcgagtga
DBGET
integrated database retrieval system
