Oryza brachyantha (malo sina): 102722970
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Entry
102722970 CDS
T02995
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
102722970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obr03000
]
102722970
Transcription factors [BR:
obr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
102722970
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
102722970
NCBI-ProteinID:
XP_040381542
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All DBs
Position
6:13383196..13387346
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AA seq
400 aa
AA seq
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MGDTLLCDQLLVDGDGGGEFVVAPHHACADADDLFSILETWEDCANGGGAASTATLMSPT
AVGGGQQQQLLLEAAAEKIAPLSANKRQLPAPSLLPDGGGVEGSPQKRHRCSPAPAASTT
DDAATPKTTSHIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQV
LHSLEAKKKRKVYTEQVLSPRPSPAASCCSPRPPLSPRLPPQMLKSTPPPPLSPRLAVPI
SPRTPPTPGSPYMHLRLPPPPPPPPPKSAGSNYASPAMTPTHEPPAAASAYGQLPSLDAI
ANELSAYGNRQALAPAAAGLLPDVKVEFAGANLVLKTVSQRSPGQAVKIIAALEGRSLEI
LHAKISTVDDTAVNSFTVKIGIECQLSAEELVQEIQQTFT
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacgctgctgtgtgatcagctcctcgtggacggcgacggcggcggcgagttc
gtcgtcgctcctcaccacgcctgcgccgacgccgacgacctcttcagcatcctcgagacg
tgggaggactgtgccaacggcggcggcgccgcctccaccgcgacgttgatgagccctacc
gccgtcggtggagggcagcagcagcagctgctgctggaagctgccgccgagaagatagcg
ccgctctccgccaacaagcggcagctgccggcgccgtcgttattgcctgacggcggcggc
gtcgagggctcgccgcagaagaggcacaggtgctccccggctccggcggcctcgacgacc
gacgacgcggcgacgcccaagacgacgtcgcacatcgccgtggagcgcaaccggaggaag
cagatgaacgagaacctcgccgtgctgcgctccctcatgccatgcttctacgtcaagcga
ggagaccaggcgtcgattattggaggagtggtcgactacatcaaggagctgcagcaggtg
ctgcactcgctggaggccaagaagaagcgcaaggtctacaccgagcaggttctcagcccg
cggccgtcgccggcggcgtcatgctgcagcccgcgcccaccgctcagcccaaggctgccg
ccgcagatgctcaagtcgacgccgccgccgcctctcagcccgcggctcgccgtgccgatc
agccccaggacgccgccgactcccggcagcccctacatgcatctccggctgcctccgccg
ccgcccccgcctcctccgaagtcggcaggctccaactacgcgtccccggcgatgaccccg
acacacgagcctccggcggcggcgtctgcgtacggtcagctgccatcgctggacgccatc
gccaacgagctctcggcgtacggcaacaggcaggcgctggccccggcggcggccggcctc
ctccccgacgtgaaggtggagttcgccggcgcgaacctggtgctgaagacggtgtcgcag
cgctcgccggggcaggcggtgaaaatcatcgccgctctggagggccggtcgctggagatc
ctccacgccaagatcagcaccgtcgacgacaccgccgtcaactccttcactgtcaagatt
ggaatcgagtgccagctcagcgctgaagagttggtacaggagattcagcaaacattcaca
tga
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