Oryza brachyantha (malo sina): 121053662
Help
Entry
121053662 CDS
T02995
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
121053662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obr03000
]
121053662
Transcription factors [BR:
obr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
121053662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
121053662
NCBI-ProteinID:
XP_040377397
LinkDB
All DBs
Position
2:complement(6676514..6679329)
Genome browser
AA seq
400 aa
AA seq
DB search
MADGGLCELFSDDREVRHVADADLFRILETWEECISGAGGGGGGGAAAAAGGVDDQGAAG
AGAGGARTAANGRRREGRDEEKGGGGGPPAQKRQKGSSSATSSLAAPPAAAWENEGGAAK
MSHITVERNRRKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLRSLEAKK
NRKAYADQVLSPRPPPPPAAAAAALMMKSTPPISPRLAVPISPRTPTPGSPYKHPAAGGG
GVRPPHPAAATSSSSAAYSMSPAMTPTSSSSTTTTHELSPQLPAPLPPFLPILDSLVTEL
AARGRAPFLGAPAIADGGVLVPGVKVEFAGPNLVLKTVSHRAPGQALKIIAALESLSLEI
LHVSISTVDDTTVLSFTIKIGIECELSAEELVQEIQQTFL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcggcctgtgcgagctcttctccgacgaccgcgaagtacggcacgtcgcg
gacgccgacctgttccgcatcctcgagacgtgggaggagtgcatcagtggagcaggcggc
ggcggcggcggcggcgctgctgctgctgccggaggtgtcgatgaccagggtgcggccggc
gccggcgcaggtggtgcaaggaccgccgcaaacggccggcggagggagggccgtgacgag
gagaaaggcggcggcggcggtcctccagctcagaagaggcaaaaggggtcgtcgtctgcg
acgtcgtctctggcggcgccgccggcggcggcatgggagaacgagggtggcgcggcgaag
atgtcgcacatcacggtggagcgcaaccggaggaagcagatgaacgagcacctcgccgtg
ctgcgctcgctcatgccatgcttctacgtcaagaggggagaccaagcgtcaatcatagga
ggagtggtggattacatcaaggagctgcagcaagtgctgcgctcgctggaggccaagaag
aacaggaaggcctacgccgaccaggtgctcagcccgcggcctccgccgccaccggcggcg
gcggcggccgcgctcatgatgaagtcaacgcctccgatcagcccgcggcttgccgtgccg
ataagcccccggacgccgacgccgggcagcccgtacaagcatccagcagctggcggcggt
ggagtccgcccgccgcacccggccgccgcgacgtcatcgtcctcggcggcttacagcatg
tctccggccatgacgcccacttcgtcctcgtctacgacgacgacacacgagctctcgccg
cagctgccggcgccgctgccgccgttcctgcccatcctcgacagcctcgtcaccgagctc
gccgcccgcggcagggcgccgttcctgggcgcccccgccatcgccgacggcggcgtcctc
gtccccggcgtgaaggtggagttcgccgggccgaacctggtgctgaagacggtgtcgcac
cgcgcgccgggccaggcgctcaagatcatcgccgccctggagagcctctcgctcgagatt
ctccacgtcagcatcagcaccgtcgacgacaccaccgtcctctccttcaccatcaagatt
gggatcgaatgcgagctgagcgcagaggagctggtgcaagaaattcagcaaaccttcttg
tga
DBGET
integrated database retrieval system
